Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044353_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:3:225681761:225694149:1 gene:Zm00001d044353 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGTCCCACGCGCAATTCATCGAGCACCTTCGCTGCGCGGCCTCGTCCGACCGCACCCCT CGCACCGGCGAGGCTCTTCACGGCTGGGCGCTCAAGTCCGGCGCAGCCTCCCACGCGCCT GTCTCCAACTCTCTCATCACCTTCTACTGTTCCCTCCCGCGGCCTCTACTCGGCGCAGCC TACGTCGTCTTCGCCGACATCCCCGCCGCCTTGCGCGACGTCGCCTCGTGGAACTCCCTC CTCAACCCGCTCTCCCGCCACCACCCCGTCTCCGCGCTCTCCCATTTCCGCTCCATGATG TCCTCCCCCGAGGCCGTTCTCCCCTCGCCGCACTCCTTCGCTGCCGCGTTCACTGCCGCC GCCCGTGTGCCCTCTGCGTCCGCTGGCGCCGTCACGCACGCGCTCGCGTGCAAGCTGCCA TCCTCCTGCGGCTCCAATAATGTCTTCGTCTCGACCGCCCTTCTAAACATGTACTGCAAG CTGGGAGCTGTTTCTGATGCCAAGAGAGTGTTTGATGGAATGCTACATCGCAATGCAGTG TCCTGGGCTGCCATGGTGTCAGGTTATGCCACTGGGAAGTGTTCTGAGGAGGCCTTTGAG CTCTTCCGGCTGATGCTTCAGAAGTGCCCATTGGAGAAAAATGAGTTTGTAACCACAGCA GTTCTTAGCGCAGTTAGCGTGCCACTGGGTTTGCTTATGGGGACGCAGTTGCATGGGCTG GTATTAAAGGATGGTTTGGTGGGATTTGTGTCTGTTGAGAATTCGCTTGTCACAATGTAT GCAAAGGCTGAGTGTATGGATGCAGCAATGAGGGTGTTTGGGTCATCTAAGGAGAGGAAC TCCATCACATGGTCAGCAATGATCACAGGCCGTGCAGGCCAGTTAAAAGAAGCAAAGGAC TTCATAGATTCGATAACTATTGACCATGGTGAGCAGCTGATGGAGTTAGGTACTGAGGAC TCATCTGCTTATATACTGTTATCAAACATCTATGCTGCCCAGCGGAAGTGGAATGATGTT GAGCGGATTGATCCCATGATGTCAGACAAACACCCTGTTAAAGCAATGTGTGACATCCGT GATTTGGGGTTATTTTATGTTGTATTTTCTTTTCCTGACAAATCCAACCCTCCTGTTTTT GACAAGTGTGATTGGCACTGTGTTTCACATATTGAAGCAGCTTGGGATCTTGCATATTCT ATTGCATCTGTGTGTTCGGCGATGGTTCTGATCCCAAGTCACAGGTCTGAAATTTTATCA TACTTCTTGATACATGAGCACCCTGAAATGCTGAAACAACCTTTATGA

Peptide Sequence

PEP ID	Zm00001d044353_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:3:225681761:225694149:1 gene:Zm00001d044353 transcript:Zm00001d044353_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MSHAQFIEHLRCAASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAA YVVFADIPAALRDVASWNSLLNPLSRHHPVSALSHFRSMMSSPEAVLPSPHSFAAAFTAA ARVPSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAV SWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGL VLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGRAGQLKEAKD FIDSITIDHGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERIDPMMSDKHPVKAMCDIR DLGLFYVVFSFPDKSNPPVFDKCDWHCVSHIEAAWDLAYSIASVCSAMVLIPSHRSEILS YFLIHEHPEMLKQPL

Transcript Sequence

Transcript ID	Zm00001d044353_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:225681761:225694149:1 gene:Zm00001d044353 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGTCCCACGCGCAATTCATCGAGCACCTTCGCTGCGCGGCCTCGTCCGACCGCACCCCT CGCACCGGCGAGGCTCTTCACGGCTGGGCGCTCAAGTCCGGCGCAGCCTCCCACGCGCCT GTCTCCAACTCTCTCATCACCTTCTACTGTTCCCTCCCGCGGCCTCTACTCGGCGCAGCC TACGTCGTCTTCGCCGACATCCCCGCCGCCTTGCGCGACGTCGCCTCGTGGAACTCCCTC CTCAACCCGCTCTCCCGCCACCACCCCGTCTCCGCGCTCTCCCATTTCCGCTCCATGATG TCCTCCCCCGAGGCCGTTCTCCCCTCGCCGCACTCCTTCGCTGCCGCGTTCACTGCCGCC GCCCGTGTGCCCTCTGCGTCCGCTGGCGCCGTCACGCACGCGCTCGCGTGCAAGCTGCCA TCCTCCTGCGGCTCCAATAATGTCTTCGTCTCGACCGCCCTTCTAAACATGTACTGCAAG CTGGGAGCTGTTTCTGATGCCAAGAGAGTGTTTGATGGAATGCTACATCGCAATGCAGTG TCCTGGGCTGCCATGGTGTCAGGTTATGCCACTGGGAAGTGTTCTGAGGAGGCCTTTGAG CTCTTCCGGCTGATGCTTCAGAAGTGCCCATTGGAGAAAAATGAGTTTGTAACCACAGCA GTTCTTAGCGCAGTTAGCGTGCCACTGGGTTTGCTTATGGGGACGCAGTTGCATGGGCTG GTATTAAAGGATGGTTTGGTGGGATTTGTGTCTGTTGAGAATTCGCTTGTCACAATGTAT GCAAAGGCTGAGTGTATGGATGCAGCAATGAGGGTGTTTGGGTCATCTAAGGAGAGGAAC TCCATCACATGGTCAGCAATGATCACAGGCCGTGCAGGCCAGTTAAAAGAAGCAAAGGAC TTCATAGATTCGATAACTATTGACCATGGTGAGCAGCTGATGGAGTTAGGTACTGAGGAC TCATCTGCTTATATACTGTTATCAAACATCTATGCTGCCCAGCGGAAGTGGAATGATGTT GAGCGGATTGATCCCATGATGTCAGACAAACACCCTGTTAAAGCAATGTGTGACATCCGT GATTTGGGGTTATTTTATGTTGTATTTTCTTTTCCTGACAAATCCAACCCTCCTGTTTTT GACAAGTGTGATTGGCACTGTGTTTCACATATTGAAGCAGCTTGGGATCTTGCATATTCT ATTGCATCTGTGTGTTCGGCGATGGTTCTGATCCCAAGTCACAGGTCTGAAATTTTATCA TACTTCTTGATACATGAGCACCCTGAAATGCTGAAACAACCTTTATGAGTTGCATTCATG AAACATTTGATCCATCTACATGCATATCAACCGCCAGATGAGACGCAACATGTTCTAAAG ATTGAGGCTCATTCTGGTGGCCTAAATGATATAGCAGTCTCTCGACCAAATAAGCAACCT TTTGATGTCACCTGGGAGATGATAAACTGATTAAGAAATTATTTACACTCGAAGGACACA AGGTGACTGTGTATTCTATATCCCAGTGTAATCTTTATTCTAAACAAGATCGATGTTATT ACAATGAATCAGAATTGCTGAATCAAGAGTTTGTATAACCTATAAACTTTTATGAATTGC TGATTTTTTTTTCT