Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044330_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:3:225344348:225349101:1 gene:Zm00001d044330 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 6 description:Telomere repeat-binding factor 1
Sequence

ATGGGGGTGCCGAAGCAGCGCTGGACGCCGGAGGAAGAGGCCGCGCTCAAGGCCGGCGTC
GCCAAGCACGGGCCCGGCAAGTGGCGCACCATCCTCCGGGACTCGGACTTCAGCGCGCTC
CTGCGCCTCCGCTCCAATGTTGACCTCAAGGACAAGTGGCGCAACTTGAGCGTCACCGCA
GGAGGTTACGGGTCTAGAGAGAAGGCAAGGATGGCGTTGAAGAAAGGCAGGCGCGTGGTG
CCTAAGCTTACTGCTGAGCCAATGGATGTAGATGAGAAGGATATGGACAACGCTCATGAC
ACAGTCATTGATGTGGAACCGTTAGCAATGGCTTTCGAGCCCTTGCCTTTTTTGGAAAGC
CCAGATAAGTCAGTTGCTAGGCTCGATGATCTCATAGTAGAAGCTATAAGGAAGCTTAAC
GAGCCATCTGGGTCCAATAAGGCAGTCATTTCTGGATATATTGAGGACCAATACTGGCCG
CCTGCTGATTTTCAATACCTGCTATCTACAAAATTGAAGTCATTGGTTAATTCTGGAAAA
TTAATCAAGGTAAACCAAAAGTACAGAATTGCACCAAGTTCTTCCTTGGGCGGAATAAGC
ACTAAGGTATCCTCTTCTGAAGGGATGAACACAGAAAATAATAATGTTAAACGGCTAACT
AAGCCTCAAGTGGTTGCTGAACTGGAGAAGATGAAAGGCATGACCAGGGAAGAGGCTGCT
GCCTTTGCTGCCAAGGCAGTTGCCGAGGCAGAAGTAGCAATGGCAGAAGCTGAGGAAGCA
GCAAGAGTTGCAGAGGCTGCAGAAAATGATGCTGAAGCTGCAAAGGCTTTTCTTGATGCT
GTCATTTTGTCAATGAGAAACAGGAACGCTGCTTCCATGACCCTTCTATAA

Peptide Sequence

PEP ID

Zm00001d044330_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:3:225344348:225349101:1 gene:Zm00001d044330 transcript:Zm00001d044330_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 6 description:Telomere repeat-binding factor 1
Sequence

MGVPKQRWTPEEEAALKAGVAKHGPGKWRTILRDSDFSALLRLRSNVDLKDKWRNLSVTA
GGYGSREKARMALKKGRRVVPKLTAEPMDVDEKDMDNAHDTVIDVEPLAMAFEPLPFLES
PDKSVARLDDLIVEAIRKLNEPSGSNKAVISGYIEDQYWPPADFQYLLSTKLKSLVNSGK
LIKVNQKYRIAPSSSLGGISTKVSSSEGMNTENNNVKRLTKPQVVAELEKMKGMTREEAA
AFAAKAVAEAEVAMAEAEEAARVAEAAENDAEAAKAFLDAVILSMRNRNAASMTLL

Transcript Sequence

Transcript ID

Zm00001d044330_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:225344348:225349101:1 gene:Zm00001d044330 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 6 description:Telomere repeat-binding factor 1
Sequence

TTCCTCTCCATCTCACGCCACTGCGTTGCCTACTTGCCCTAGAACCCTCGCCGCCGCCCC
TCTTTAGGATTCCCATGTCCCTGGTCGCCCCCTGACACGCCCGCCCCGGATCCTGCACCG
GAATTCCGCGTGGAATTCCGGGCCGAACCGCCTCTCTGCGTGCGCCTCCGACCACCAAAC
TCTCTCACACGCGCGCGCGCGCACGTCTGAGGCGGTTGGATTCTCCGGTGGGGGTCCCTT
GGTCTCGATTTGCTGCTGATGGGGGTGCCGAAGCAGCGCTGGACGCCGGAGGAAGAGGCC
GCGCTCAAGGCCGGCGTCGCCAAGCACGGGCCCGGCAAGTGGCGCACCATCCTCCGGGAC
TCGGACTTCAGCGCGCTCCTGCGCCTCCGCTCCAATGTTGACCTCAAGGACAAGTGGCGC
AACTTGAGCGTCACCGCAGGAGGTTACGGGTCTAGAGAGAAGGCAAGGATGGCGTTGAAG
AAAGGCAGGCGCGTGGTGCCTAAGCTTACTGCTGAGCCAATGGATGTAGATGAGAAGGAT
ATGGACAACGCTCATGACACAGTCATTGATGTGGAACCGTTAGCAATGGCTTTCGAGCCC
TTGCCTTTTTTGGAAAGCCCAGATAAGTCAGTTGCTAGGCTCGATGATCTCATAGTAGAA
GCTATAAGGAAGCTTAACGAGCCATCTGGGTCCAATAAGGCAGTCATTTCTGGATATATT
GAGGACCAATACTGGCCGCCTGCTGATTTTCAATACCTGCTATCTACAAAATTGAAGTCA
TTGGTTAATTCTGGAAAATTAATCAAGGTAAACCAAAAGTACAGAATTGCACCAAGTTCT
TCCTTGGGCGGAATAAGCACTAAGGTATCCTCTTCTGAAGGGATGAACACAGAAAATAAT
AATGTTAAACGGCTAACTAAGCCTCAAGTGGTTGCTGAACTGGAGAAGATGAAAGGCATG
ACCAGGGAAGAGGCTGCTGCCTTTGCTGCCAAGGCAGTTGCCGAGGCAGAAGTAGCAATG
GCAGAAGCTGAGGAAGCAGCAAGAGTTGCAGAGGCTGCAGAAAATGATGCTGAAGCTGCA
AAGGCTTTTCTTGATGCTGTCATTTTGTCAATGAGAAACAGGAACGCTGCTTCCATGACC
CTTCTATAAATGCAGATACTTCGAGCTTGCTGATCCTTTACCCATGCAGCACACCGATGT
TCTGCTGCAAAGATTTTCTGGATAGACGAGTTTCTTGTATAGCCTTATAGATCATGGCGG
GTTTTCAACAGCTTGCTGTTGTCCTGTGCTGTGCAGCCAATCGACAACATGATAACAAGA
ATGATCGAGAAAGTAGTCTTCATTTTTTTTTGTTTCCCATTGTGTTGCTTTGTAATTAAA
CTATAGCCTTTTCCCTTCATTAGTTGATGAAGTGATGTCGTCTAATAGAACAACTGTAGT
GAAAAGAAAATGTCAGAAAGCCGCCTTAGTTAATGCAAATTGCTGTGATAGTATTTTTGC
AGAAATGATTATATGGTGACAGCGTTTAAGATTATAACTGCCTTGCAGTTGCCGTCGATT
ATAT