Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044303_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:3:224622931:224637046:-1 gene:Zm00001d044303 gene_biotype:protein_coding transcript_biotype:protein_coding description: myosin1
Sequence	ATGGATATAGTTGGAATCAATGAGGAAGAGCAGGAAGGTATATTCCGGGTTGTAGCTGCT GTACTTCATCTTGGAAATATAAATTTTGCCAAGGGAACAGAAATCGATTCTTCTGTAATC AAGGATGATAAATCCAGGTTCCACCTTAATATCGCAGCAGAACTTTTGAAATGTGATTGC CAGAATTTAGAGAAGGCGCTGATAACACGAGTTATAGTCACGCCTGAAGAAGTTATCACT AGAACACTTGATCCTGCTTCTGCAGTTGCTAGCAGAGACGCATTAGCTAAAATAATATAC TCCCGATTGTTTGATTGGATTGTGGAAAAAATTAATGTCTCAATTGGACAGGACCCAAAC TCAAAACAGTTAATTGGAGTTCTTGATATCTATGGTTTTGAGAGCTTCAAAGTTAACAGT TTTGAACAGCTATGTATCAATTATACAAATGAAAAGCTGCAACAACATTTTAACCAGCAC GTGTTCAAAATGGAACAAGAAGAGTATACCAGAGAAGAGATAAACTGGAGTTACATCGAG TTTGTTGATAATCAAGATGTGCTAGACTTGATAGAGAAGAAAGGTGGATTGATTGCACTT CTGGATGAAGCATGTATGTTTCCTAGATCTACACATGAGACGTTTGCGCAGAAGCTATAT ACAACATTTAAGAATAACAAGCGGTTTGCCAAGCCAAAGCTTTCACGCACTGATTTTACA GTAGTCCATTATGCTGGCGATGTGACATACCAGGCTGATTATTTCTTAGACAAGAACAAA GATTATGTAGTGGCTGAACATCAGGATCTGCTGAATGCTTCTTCATGCCTATTCGTAGCT GGTTTATTCCCTCCTCTCCCACAGGAGACAGCAAAGTCTTCAAAATTTTCATCCATTGGA TCACGTTTTAAGCTTCAACTTCAATCCCTCATGGAAACTTTGAGCTCTACCGAACCCCAC TATATTAGATGTGTGAAGCCAAATAATCTCCTTAAGCCAGCTATTTTTGAGAATACAAAT GTTATACAACAACTAAGATGTGGAGGTGTTCTCGAAGCTATCAGGATCAGCTGTGCTGGA TATCCCACAAGAAAAACATTTTATGAATTTGTCAATCGTTTTGGTGTCCTTGCTCCTGAA GTTTTAGAAGGGAGCAATGATGATAAGATTGCGTGCCAAAAGATTTTGGAAAAAATGGGT CTGGAGAATTACCAGATTGGAAAAACAAAGGTGTTTCTAAGAGCTGGACAGATGGCTGAT TTGGATGCTCGTAGAGCTGAAGTATTAGGAAGAGCAGCAAGAATCATACAGAGGCAAATA CGTACATATATTGCAAGGAAACAGTTTGCTGAGCTTAAAAGATCAGCAACACAGCTGCAA TCTTTTGTCAGAGGAACCTTGGCTCGTAAGTTGTATGAGTGCATGAGGCAGGAAGCAGCA GCAGTGAAAATACAAAAGAATATGCGACGCCACAAAGCACGGGAATCTTATTTACAATTG CAAGCAGCTGCAATCACATTGCAGACAGGTTTAAGGGCAATGTCTGCTCGCAAAGAATTC AGGTTCAGAAAGGAAACAAAAGCTGCTGTCCACATCCAAGCTCAATGGCGCCGCCACAGA GACTACTCACATTACAAGAATCTGCAAGGAGCAGCTCTTACTTACCAGTGTGCCTGGAGG CAAAGGCTTGCCAGAAGGGAGCTCAGGAAGCTCAAGATGGCGGCAAGAGAAACAGGAGCC CTAAAAGAGGCCAAGGATAAACTTGAGAAGCGTGTTGAAGAACTCACCTGGCGCTTAGGA TTGGAGAAGCGATTAAGGACTGACCTTGAGGAAGCAAAAGCCCAGGAAATTGCTAAGCTG CAAGAGACGTTGCATGATATGCAGCTTCAAGTTGAAGAGTCAAAGGCCATGGTAGTTAAG GAGAGGGAAGCTGCTAGAAAGGCAATTGAAGAAGCACCTCCAGTAATTAAAGAGACTCCT GTGCTAGTCGAAGACACAGAAAAGATTAACTCACTGACGACCGAAGTTGAACAACTGAAG GCTTTGCTGCTAACTGAAAGACAAGCAACAGAAGCTGCAAAAAGAGAACACGCTGAATCT GAACTGAGAAATGAAGAACTAATTAAGAAATTTGAGAGCGCAGAGAAAAAGATTGAGCAA CTTCAGGAAACTGTCCATAGGCTGGAGGAGAAAGCAACCAACATGGAGTCTGAGAACAAA GTGCTCCGTCAACAAGCTGTTGCAATTTCTCCTACGTCAAAATCATTAGCTGCATATCCT AAGTCTCCTTTCCAGCTGAAAACTCCGGAGAATGGGAATGCTCTAAATGGAGAAGTGAAG TCATCACCAGATATCACCCCTATCTTACCAAACCCCAAGGAGCTTGAGGCTGAAGAGAAG CCACAAAAATCACTTAATGAAAAGCAGCAGGAAAATCAAGACCTACTGATCAAGTGTGTA TCACAAGATCTGGGATTCTCCAGTGGCAAACCTATTGCAGCTTGCCTTATCTACAGGTGT CTTCTACACTGGAGATCATTCGAAGTTGAAAGAACTGGTGTTTTTGACCGTATTATTCAA ACAATTGGCTCTGCTATTGAGTCCCAGGACAACAATGACAAGTTGGCATATTGGCTCTCG AATTCATCCACACTGCTGCTGCTGCTGCAACGAACACTGAAAACAACTGGAGCAGCTGGA TTCACTCCTCAAAGGCGCAGGTCATCTGCTGCATCTTTTGGGAGGGTGTTTTCGGGGATG CGAGCCTCACCACAAAGTGCTGGGCGTGCTTTTATGGGAAGTCGCTTGATTGGAGGTCTA GGTGACCTTCGTCAAGTTGAAGCCAAGTACCCTGCCCTGCTTTTCAAGCAACAGCTCACA GCTTTCCTTGAGAAGATCTATGGAATGATAAGAGACAATTTGAAAAAGGAGATATCTCCT TTGCTTGGCCTTTGCATCCAGGCACCAAGAACATCCCGTGCAAGCCTAATTAAAGGGTCA CGTTCCCAAGCAAATGCCTTAGCTCAGCAAACTCTGATTGCACATTGGCAGAGCATTGTG AAAATATTGACAAATTACTTGAATGTTTTAAAAGCAAATTATGTCCCTTCAGTCTTAATC AGCAAAGTGTTCACTCAAATCTTTTCATTTATTAATGTTCAGTTATTTAATAGTCTTCTT CTTCGACGGGAGTGCTGTTCATTTAGCAACGGAGAATATGTGAAAGCTGGATTGGCAGAA TTAGAGCAGTGGTGCATTTATGCAACAGAAGAGTATGCAGGTTCTTCCTGGGAAGAATTA AAACATATTAGGCAGGCTGTTGGATTCCTTGTGATTCATCAAAAGCCAAAGAAAACATTG AAAGAAATTACCAACGATCTGTGCCCTGTCCTTAGCATACAACAGCTATATCGAATCAGT ACAATGTACTGGGATGATAAGTACGGTACCCACACTGTTTCATCAGATGTCATCTCAAGT ATGAGAGTAATGATGACAGAAGATTCTAATAACGCGGTCAGCAGTTCGTTCCTGTTGGAT GATGATTCCAGCATTCCGTTTTCGGTGGACGACATCTCGAAGTCGATGACAGAAATCGAG GTAACAGATGTCGACATGCCACCTCTGATCCGGGAGAATTCTGGCTTCACCTTCCTACAC CAAAGAAAGGACTAA

Peptide Sequence

PEP ID	Zm00001d044303_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:3:224622931:224637046:-1 gene:Zm00001d044303 transcript:Zm00001d044303_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description: myosin1
Sequence	MDIVGINEEEQEGIFRVVAAVLHLGNINFAKGTEIDSSVIKDDKSRFHLNIAAELLKCDC QNLEKALITRVIVTPEEVITRTLDPASAVASRDALAKIIYSRLFDWIVEKINVSIGQDPN SKQLIGVLDIYGFESFKVNSFEQLCINYTNEKLQQHFNQHVFKMEQEEYTREEINWSYIE FVDNQDVLDLIEKKGGLIALLDEACMFPRSTHETFAQKLYTTFKNNKRFAKPKLSRTDFT VVHYAGDVTYQADYFLDKNKDYVVAEHQDLLNASSCLFVAGLFPPLPQETAKSSKFSSIG SRFKLQLQSLMETLSSTEPHYIRCVKPNNLLKPAIFENTNVIQQLRCGGVLEAIRISCAG YPTRKTFYEFVNRFGVLAPEVLEGSNDDKIACQKILEKMGLENYQIGKTKVFLRAGQMAD LDARRAEVLGRAARIIQRQIRTYIARKQFAELKRSATQLQSFVRGTLARKLYECMRQEAA AVKIQKNMRRHKARESYLQLQAAAITLQTGLRAMSARKEFRFRKETKAAVHIQAQWRRHR DYSHYKNLQGAALTYQCAWRQRLARRELRKLKMAARETGALKEAKDKLEKRVEELTWRLG LEKRLRTDLEEAKAQEIAKLQETLHDMQLQVEESKAMVVKEREAARKAIEEAPPVIKETP VLVEDTEKINSLTTEVEQLKALLLTERQATEAAKREHAESELRNEELIKKFESAEKKIEQ LQETVHRLEEKATNMESENKVLRQQAVAISPTSKSLAAYPKSPFQLKTPENGNALNGEVK SSPDITPILPNPKELEAEEKPQKSLNEKQQENQDLLIKCVSQDLGFSSGKPIAACLIYRC LLHWRSFEVERTGVFDRIIQTIGSAIESQDNNDKLAYWLSNSSTLLLLLQRTLKTTGAAG FTPQRRRSSAASFGRVFSGMRASPQSAGRAFMGSRLIGGLGDLRQVEAKYPALLFKQQLT AFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLIKGSRSQANALAQQTLIAHWQSIV KILTNYLNVLKANYVPSVLISKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAE LEQWCIYATEEYAGSSWEELKHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRIS TMYWDDKYGTHTVSSDVISSMRVMMTEDSNNAVSSSFLLDDDSSIPFSVDDISKSMTEIE VTDVDMPPLIRENSGFTFLHQRKD

Transcript Sequence

Transcript ID	Zm00001d044303_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:224622931:224637046:-1 gene:Zm00001d044303 gene_biotype:protein_coding transcript_biotype:protein_coding description: myosin1
Sequence	CAACCCAGTTCTTGAAGCTTTTGGTAATGCTAAAACTGTGCGAAATAACAACTCAAGTCG CTTTGGCAAGTTTGTTGAGATCCAATTTGACAAGACTGGACGGATCTCAGGAGCTGCTAT CAGAACTTACTTGCTGGAAAGATCACGTGTGTGCCAAATTAATTCTCCAGAAAGAAATTA CCATTGCTTTTATTTTCTTTGTGCCGCACCACCTGAGTACACTCAGAGGTACAAGCTGTC TGATCCTAGATCTTTCCATTACCTCAATCAGTCGAGCTGTATTGAGGTGGATGGAATCAA TGATGCTGAAGAGTATTTAGCAACACGAAGAGCTATGGATATAGTTGGAATCAATGAGGA AGAGCAGGAAGGTATATTCCGGGTTGTAGCTGCTGTACTTCATCTTGGAAATATAAATTT TGCCAAGGGAACAGAAATCGATTCTTCTGTAATCAAGGATGATAAATCCAGGTTCCACCT TAATATCGCAGCAGAACTTTTGAAATGTGATTGCCAGAATTTAGAGAAGGCGCTGATAAC ACGAGTTATAGTCACGCCTGAAGAAGTTATCACTAGAACACTTGATCCTGCTTCTGCAGT TGCTAGCAGAGACGCATTAGCTAAAATAATATACTCCCGATTGTTTGATTGGATTGTGGA AAAAATTAATGTCTCAATTGGACAGGACCCAAACTCAAAACAGTTAATTGGAGTTCTTGA TATCTATGGTTTTGAGAGCTTCAAAGTTAACAGTTTTGAACAGCTATGTATCAATTATAC AAATGAAAAGCTGCAACAACATTTTAACCAGCACGTGTTCAAAATGGAACAAGAAGAGTA TACCAGAGAAGAGATAAACTGGAGTTACATCGAGTTTGTTGATAATCAAGATGTGCTAGA CTTGATAGAGAAGAAAGGTGGATTGATTGCACTTCTGGATGAAGCATGTATGTTTCCTAG ATCTACACATGAGACGTTTGCGCAGAAGCTATATACAACATTTAAGAATAACAAGCGGTT TGCCAAGCCAAAGCTTTCACGCACTGATTTTACAGTAGTCCATTATGCTGGCGATGTGAC ATACCAGGCTGATTATTTCTTAGACAAGAACAAAGATTATGTAGTGGCTGAACATCAGGA TCTGCTGAATGCTTCTTCATGCCTATTCGTAGCTGGTTTATTCCCTCCTCTCCCACAGGA GACAGCAAAGTCTTCAAAATTTTCATCCATTGGATCACGTTTTAAGCTTCAACTTCAATC CCTCATGGAAACTTTGAGCTCTACCGAACCCCACTATATTAGATGTGTGAAGCCAAATAA TCTCCTTAAGCCAGCTATTTTTGAGAATACAAATGTTATACAACAACTAAGATGTGGAGG TGTTCTCGAAGCTATCAGGATCAGCTGTGCTGGATATCCCACAAGAAAAACATTTTATGA ATTTGTCAATCGTTTTGGTGTCCTTGCTCCTGAAGTTTTAGAAGGGAGCAATGATGATAA GATTGCGTGCCAAAAGATTTTGGAAAAAATGGGTCTGGAGAATTACCAGATTGGAAAAAC AAAGGTGTTTCTAAGAGCTGGACAGATGGCTGATTTGGATGCTCGTAGAGCTGAAGTATT AGGAAGAGCAGCAAGAATCATACAGAGGCAAATACGTACATATATTGCAAGGAAACAGTT TGCTGAGCTTAAAAGATCAGCAACACAGCTGCAATCTTTTGTCAGAGGAACCTTGGCTCG TAAGTTGTATGAGTGCATGAGGCAGGAAGCAGCAGCAGTGAAAATACAAAAGAATATGCG ACGCCACAAAGCACGGGAATCTTATTTACAATTGCAAGCAGCTGCAATCACATTGCAGAC AGGTTTAAGGGCAATGTCTGCTCGCAAAGAATTCAGGTTCAGAAAGGAAACAAAAGCTGC TGTCCACATCCAAGCTCAATGGCGCCGCCACAGAGACTACTCACATTACAAGAATCTGCA AGGAGCAGCTCTTACTTACCAGTGTGCCTGGAGGCAAAGGCTTGCCAGAAGGGAGCTCAG GAAGCTCAAGATGGCGGCAAGAGAAACAGGAGCCCTAAAAGAGGCCAAGGATAAACTTGA GAAGCGTGTTGAAGAACTCACCTGGCGCTTAGGATTGGAGAAGCGATTAAGGACTGACCT TGAGGAAGCAAAAGCCCAGGAAATTGCTAAGCTGCAAGAGACGTTGCATGATATGCAGCT TCAAGTTGAAGAGTCAAAGGCCATGGTAGTTAAGGAGAGGGAAGCTGCTAGAAAGGCAAT TGAAGAAGCACCTCCAGTAATTAAAGAGACTCCTGTGCTAGTCGAAGACACAGAAAAGAT TAACTCACTGACGACCGAAGTTGAACAACTGAAGGCTTTGCTGCTAACTGAAAGACAAGC AACAGAAGCTGCAAAAAGAGAACACGCTGAATCTGAACTGAGAAATGAAGAACTAATTAA GAAATTTGAGAGCGCAGAGAAAAAGATTGAGCAACTTCAGGAAACTGTCCATAGGCTGGA GGAGAAAGCAACCAACATGGAGTCTGAGAACAAAGTGCTCCGTCAACAAGCTGTTGCAAT TTCTCCTACGTCAAAATCATTAGCTGCATATCCTAAGTCTCCTTTCCAGCTGAAAACTCC GGAGAATGGGAATGCTCTAAATGGAGAAGTGAAGTCATCACCAGATATCACCCCTATCTT ACCAAACCCCAAGGAGCTTGAGGCTGAAGAGAAGCCACAAAAATCACTTAATGAAAAGCA GCAGGAAAATCAAGACCTACTGATCAAGTGTGTATCACAAGATCTGGGATTCTCCAGTGG CAAACCTATTGCAGCTTGCCTTATCTACAGGTGTCTTCTACACTGGAGATCATTCGAAGT TGAAAGAACTGGTGTTTTTGACCGTATTATTCAAACAATTGGCTCTGCTATTGAGTCCCA GGACAACAATGACAAGTTGGCATATTGGCTCTCGAATTCATCCACACTGCTGCTGCTGCT GCAACGAACACTGAAAACAACTGGAGCAGCTGGATTCACTCCTCAAAGGCGCAGGTCATC TGCTGCATCTTTTGGGAGGGTGTTTTCGGGGATGCGAGCCTCACCACAAAGTGCTGGGCG TGCTTTTATGGGAAGTCGCTTGATTGGAGGTCTAGGTGACCTTCGTCAAGTTGAAGCCAA GTACCCTGCCCTGCTTTTCAAGCAACAGCTCACAGCTTTCCTTGAGAAGATCTATGGAAT GATAAGAGACAATTTGAAAAAGGAGATATCTCCTTTGCTTGGCCTTTGCATCCAGGCACC AAGAACATCCCGTGCAAGCCTAATTAAAGGGTCACGTTCCCAAGCAAATGCCTTAGCTCA GCAAACTCTGATTGCACATTGGCAGAGCATTGTGAAAATATTGACAAATTACTTGAATGT TTTAAAAGCAAATTATGTCCCTTCAGTCTTAATCAGCAAAGTGTTCACTCAAATCTTTTC ATTTATTAATGTTCAGTTATTTAATAGTCTTCTTCTTCGACGGGAGTGCTGTTCATTTAG CAACGGAGAATATGTGAAAGCTGGATTGGCAGAATTAGAGCAGTGGTGCATTTATGCAAC AGAAGAGTATGCAGGTTCTTCCTGGGAAGAATTAAAACATATTAGGCAGGCTGTTGGATT CCTTGTGATTCATCAAAAGCCAAAGAAAACATTGAAAGAAATTACCAACGATCTGTGCCC TGTCCTTAGCATACAACAGCTATATCGAATCAGTACAATGTACTGGGATGATAAGTACGG TACCCACACTGTTTCATCAGATGTCATCTCAAGTATGAGAGTAATGATGACAGAAGATTC TAATAACGCGGTCAGCAGTTCGTTCCTGTTGGATGATGATTCCAGCATTCCGTTTTCGGT GGACGACATCTCGAAGTCGATGACAGAAATCGAGGTAACAGATGTCGACATGCCACCTCT GATCCGGGAGAATTCTGGCTTCACCTTCCTACACCAAAGAAAGGACTAACAGGGTGGTCC TTCCAGCTGCATGTCCCTTTTTGCACATTCTTTTTCTCCGCTCAACCTGTGCATAACTCA TGTACATACGCTCGTGCCTTTTGCTCTCTGGTCAGGGCTTGTTAGATGTATTGTCTTTGG TTTGATTGGTTGGTTGGTTCTTTCCTCGATCCTCTCCCAATTTTGTTGGGCGAAGGGTCC ACAATCTATGTTTCTCCATACTGTAGTGAAAAGGGGCCGGATGCCCCTGGTCTCCCCGAG CTGCTTTTGGAAAAGCTCGTGGTCATTAAGCAGTTAAGCTTGTGGAAAAGGTTCTCCACA