Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044297_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:224484376:224492604:-1 gene:Zm00001d044297 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase CYP57
Sequence

ATGTCTTCGGTATACGTGCTTGAGCCCCCGACGAAGGGGAAGGTGGTGGTGCAGACGACG
GCCGGCCCGCTCGATATCGAGCTGTGGCCCAAGGAGGCCCCCAAGGCGGCGCGCAACTTC
GTGCAGCTCTGCCTCGAGGGCTACTACGACGGCACCCTCTTCCACCGCGTCATCAAGAAT
TTCCTCGTTCAGGGTGGCGACCCCACTGGCTCCGGCACTGGGGGTGAGAGCATCTATGGG
GCTCCATTTGCGGATGAGTTCCACTCGCGGCTGAGGTTTAACCACAGGGGTTTAGTGGCT
TGTGCCAATGCTGGTACATCTCATTCTAATGGGAGCCAATTCTTTATCACCCTTGACCGT
TGTGATTGGCTTGATAAGAAGAACACCATCTTTGGGAAGGTTACTGGTGATTCTATTTTC
AACCTTCTTTCCTTGGCCGACGTTGAGACTGATAAGGATGATCGACCTGTGTACGTGCAG
AAGATTCTTTCAGTCGAGGTTCTCTGGGACCCATTTGAGGATATTGTTCCAAGGCAACTT
AAGAAGGCTGAATCTGTTGCTAAGGCTGATGCTGAGGTGAAACCCAAGAAGAAGGCAGTT
AAGCAACTTAACGTCCTCTCGTTTGGTGATGAAGTAGAAGAGGAGGAGAATGAAGCAGCT
ACCTCTGTTCAGGCCAAAATAAAAAGTATTCATGATGTGTTGGACGATCCCCGTTTTCTT
AAAGGGGAACCGGAGGATGTACAGTTGTCCAAGGAGCAAGAGGAGATGAAAAAGGTTACT
GTTCAAACTGTCAGGGATGCTTTGATCTCAAAGAAAGTTGAATCAAGGGAGCAAGATAAT
GCTCCATTATCTGATGATTTTCCTGAAGACGAGAATGAAGAGGATTTTGATAACAGGATG
CGCGCACAAATCCTTAAAAAACGTAGAGAGCTTGGTGATGTTTGCCCTCATGAAACCTCT
AAAGCAGATAAACCTCATCATAAGGATAAGGAATTATCAGACCGCAGGTCCAATATTGAA
CATAGGAGGGACACTGAGGACGATGATCAGGAGCATGAGCTACAAAAAGCTAAAAAACTA
TCCTTGAAGAAAAAAGGTGCTGGCTCAGAAGCGAGTGCTGAGAGGATGTCCAAAGCAGAT
GCTAATTTGCAGCTACTAAATCCAGCTGAACAAGAGAGACATTTGCAAAAACAGAAAAAA
CGTCGGCTCCAAGGCCGTGAAGATGAGACTCTAGCGAAGTTACAGAAGTTCAAGTCTTCT
TTCCTCAGTAAGAATCTTGCTACCAATCATGTCGAAGAGAAGAATCCTTCTACTGATAAG
GCGGAAAAGGAAGATGAAGAGGAGGATGACTACAAAGGGTGGCACACAAACCTACTGTCT
TTCTTACCCAGTTCTTCCAAGGATGGAATGACTAGGAAAGATGATCCAGATGACTATGTA
GTGGTAGACCCACTTCTGGAGAAAGGAAAAGAAAAATTCAACAAGATGCAAGCAAAGCTT
AAGCGGAGAGAGCGCGAATGGGCAGGCAGATCTCTCACCTGA

Peptide Sequence

PEP ID

Zm00001d044297_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:224484376:224492604:-1 gene:Zm00001d044297 transcript:Zm00001d044297_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase CYP57
Sequence

MSSVYVLEPPTKGKVVVQTTAGPLDIELWPKEAPKAARNFVQLCLEGYYDGTLFHRVIKN
FLVQGGDPTGSGTGGESIYGAPFADEFHSRLRFNHRGLVACANAGTSHSNGSQFFITLDR
CDWLDKKNTIFGKVTGDSIFNLLSLADVETDKDDRPVYVQKILSVEVLWDPFEDIVPRQL
KKAESVAKADAEVKPKKKAVKQLNVLSFGDEVEEEENEAATSVQAKIKSIHDVLDDPRFL
KGEPEDVQLSKEQEEMKKVTVQTVRDALISKKVESREQDNAPLSDDFPEDENEEDFDNRM
RAQILKKRRELGDVCPHETSKADKPHHKDKELSDRRSNIEHRRDTEDDDQEHELQKAKKL
SLKKKGAGSEASAERMSKADANLQLLNPAEQERHLQKQKKRRLQGREDETLAKLQKFKSS
FLSKNLATNHVEEKNPSTDKAEKEDEEEDDYKGWHTNLLSFLPSSSKDGMTRKDDPDDYV
VVDPLLEKGKEKFNKMQAKLKRREREWAGRSLT

Transcript Sequence

Transcript ID

Zm00001d044297_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:224484376:224492604:-1 gene:Zm00001d044297 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase CYP57
Sequence

GGGGTGAAGCCCAGTGTTGGGCTTGGGCGTACCTGACTTCCGAAAAAGCTCCGCCACGCC
CGGCCGGAGGTCCGACCGACGCCTAGACCGTTCCAAAGGGAAGGGAGCACGCGCGCGCGA
GGTAGAGCAGCGGCGGCGGCGGCAGGAGTGAGGCAGGATGTCTTCGGTATACGTGCTTGA
GCCCCCGACGAAGGGGAAGGTGGTGGTGCAGACGACGGCCGGCCCGCTCGATATCGAGCT
GTGGCCCAAGGAGGCCCCCAAGGCGGCGCGCAACTTCGTGCAGCTCTGCCTCGAGGGCTA
CTACGACGGCACCCTCTTCCACCGCGTCATCAAGAATTTCCTCGTTCAGGGTGGCGACCC
CACTGGCTCCGGCACTGGGGGTGAGAGCATCTATGGGGCTCCATTTGCGGATGAGTTCCA
CTCGCGGCTGAGGTTTAACCACAGGGGTTTAGTGGCTTGTGCCAATGCTGGTACATCTCA
TTCTAATGGGAGCCAATTCTTTATCACCCTTGACCGTTGTGATTGGCTTGATAAGAAGAA
CACCATCTTTGGGAAGGTTACTGGTGATTCTATTTTCAACCTTCTTTCCTTGGCCGACGT
TGAGACTGATAAGGATGATCGACCTGTGTACGTGCAGAAGATTCTTTCAGTCGAGGTTCT
CTGGGACCCATTTGAGGATATTGTTCCAAGGCAACTTAAGAAGGCTGAATCTGTTGCTAA
GGCTGATGCTGAGGTGAAACCCAAGAAGAAGGCAGTTAAGCAACTTAACGTCCTCTCGTT
TGGTGATGAAGTAGAAGAGGAGGAGAATGAAGCAGCTACCTCTGTTCAGGCCAAAATAAA
AAGTATTCATGATGTGTTGGACGATCCCCGTTTTCTTAAAGGGGAACCGGAGGATGTACA
GTTGTCCAAGGAGCAAGAGGAGATGAAAAAGGTTACTGTTCAAACTGTCAGGGATGCTTT
GATCTCAAAGAAAGTTGAATCAAGGGAGCAAGATAATGCTCCATTATCTGATGATTTTCC
TGAAGACGAGAATGAAGAGGATTTTGATAACAGGATGCGCGCACAAATCCTTAAAAAACG
TAGAGAGCTTGGTGATGTTTGCCCTCATGAAACCTCTAAAGCAGATAAACCTCATCATAA
GGATAAGGAATTATCAGACCGCAGGTCCAATATTGAACATAGGAGGGACACTGAGGACGA
TGATCAGGAGCATGAGCTACAAAAAGCTAAAAAACTATCCTTGAAGAAAAAAGGTGCTGG
CTCAGAAGCGAGTGCTGAGAGGATGTCCAAAGCAGATGCTAATTTGCAGCTACTAAATCC
AGCTGAACAAGAGAGACATTTGCAAAAACAGAAAAAACGTCGGCTCCAAGGCCGTGAAGA
TGAGACTCTAGCGAAGTTACAGAAGTTCAAGTCTTCTTTCCTCAGTAAGAATCTTGCTAC
CAATCATGTCGAAGAGAAGAATCCTTCTACTGATAAGGCGGAAAAGGAAGATGAAGAGGA
GGATGACTACAAAGGGTGGCACACAAACCTACTGTCTTTCTTACCCAGTTCTTCCAAGGA
TGGAATGACTAGGAAAGATGATCCAGATGACTATGTAGTGGTAGACCCACTTCTGGAGAA
AGGAAAAGAAAAATTCAACAAGATGCAAGCAAAGCTTAAGCGGAGAGAGCGCGAATGGGC
AGGCAGATCTCTCACCTGATTGGAAAGCTTAACTCAAATTATGTCAATGCTCCTTACGTC
CTTACCTACCCTGGACGGTTGGAAACACTGGAAATGATGCAGTTTTGGCATGGTCTTGGG
ACTGCGCGCAGATGATTGGTAGTGACCGTTTGTGGACTAGTGTTTTCCTTTTTGGCATGT
GTCATGATTGCTTACACTGTAAATGCAATTGTACAATAGATTGGTTATAAGCTCACTGTG
AAAGCAGCTCTCTGTATCACTAGCTATTTAATATCCGTTTCTTCAAGGAGCCGATTGGCT
GAAGTTGACACTATAGCTTTTGTCTCAATTTCCTTATTTTTATTAAGAAGCGGAATAGAC
AG