Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044290_T031
CDS Infomation

cds chromosome:B73_RefGen_v4:3:224367637:224370566:1 gene:Zm00001d044290 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-galactosidase 1
Sequence

ATGTTGATCAAGTTGACTGAGTTCCTCCCCTTCACTTCCTCAGGTTTGCTGAGAGAACCG
AAATGGGGTCACTTGAAGGAGTTGCATAAAGCTATCAAGCTTTGTGAACCAGCATTGGTT
GCAGGAGACCCAATTGTAACTTCACTTGGCAATGCTCAGCAGGCATCTGTTTTTAGATCA
AGCACCGATGCCTGTGTGGCCTTCCTTGAGAACAAGGATAAAGTATCTTATGCTAGGGTA
TCATTCAATGGAATGCATTATGATCTACCTCCCTGGTCCATAAGTATTCTCCCAGACTGC
AAAACAACAGTCTACAACACCGCCAGCGTTGGAAGTCAGATTTCACAAATGAAAATGGAA
TGGGCTGGAGGATTCACATGGCAATCATACAATGAGGATATAAACTCCTTGGGTGACGAA
TCATTTGCAACAGTTGGATTACTGGAACAGATAAATGTGACAAGGGATAACACAGACTAC
TTATGGTATACAACATACGTTGATATTGCTCAGGATGAGCAGTTTCTCAGCAATGGGAAG
AATCCTATGCTAACTGTTATGTCAGCTGGTCATGCTTTGCATATTTTCGTTAATGGACAA
CTAACAGGGACTGTGTATGGAAGCGTAGAAGATCCAAAATTGACATATAGTGGAAATGTG
AAACTTTGGTCAGGCAGTAACACTATTTCATGCTTAAGTATAGCAGTTGGTCTCCCGAAT
GTGGGAGAACATTTTGAGACTTGGAATGCTGGAATTCTAGGTCCTGTGACACTGGATGGC
CTAAATGAGGGAAGAAGAGATCTCACATGGCAGAAATGGACCTATAAGGTTGGTCTGAAA
GGTGAGGCTTTGAGTCTTCATTCACTTAGTGGCAGCTCTTCAGTAGAGTGGGGAGAACCT
GTTCAGAAGCAGCCTCTGTCATGGTACAAGGCTTTCTTCAATGCACCTGATGGTGATGAG
CCATTAGCTTTGGATATGAGTAGCATGGGTAAAGGTCAAATCTGGATAAATGGACAAGGT
ATTGGAAGGTACTGGCCTGGCTACAAAGCTTCTGGAACCTGTGGGATCTGTGATTACCGT
GGAGAGTATGATGAAAAGAAGTGCCAAACCAACTGTGGTGACTCTTCTCAGAGATGGTAC
CATGTTCCTCGTTCATGGCTTAATCCGACGGGGAACCTTTTGGTGATATTTGAGGAGTGG
GGCGGTGATCCTACCGGAATTTCGATGGTGAAAAGAATAGCAGGGAGTATCTGCGCTGAT
GTCTCCGAATGGCAGCCATCGATGGCAAACTGGCGAACAAAAGGCTATGAGAAAGCCAAG
GTCCACCTCCAGTGTGATCATGGACGGAAAATGACTCACATAAAATTTGCCAGCTTTGGC
ACACCACAGGGCTCCTGCGGGAGCTACTCTGAAGGCGGTTGCCATGCACACAAGTCATAC
GACATATTTTGGAAGAGCTGCATTGGTCAAGAGCGCTGTGGGGTAAGCGTGGTTCCAGAT
GCATTTGGTGGAGATCCATGCCCTGGGACTATGAAAAGAGCCGTTGTTGAGGCTATATGC
GGCTGA

Peptide Sequence

PEP ID

Zm00001d044290_P031
PEP Infomation

pep chromosome:B73_RefGen_v4:3:224367637:224370566:1 gene:Zm00001d044290 transcript:Zm00001d044290_T031 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-galactosidase 1
Sequence

MLIKLTEFLPFTSSGLLREPKWGHLKELHKAIKLCEPALVAGDPIVTSLGNAQQASVFRS
STDACVAFLENKDKVSYARVSFNGMHYDLPPWSISILPDCKTTVYNTASVGSQISQMKME
WAGGFTWQSYNEDINSLGDESFATVGLLEQINVTRDNTDYLWYTTYVDIAQDEQFLSNGK
NPMLTVMSAGHALHIFVNGQLTGTVYGSVEDPKLTYSGNVKLWSGSNTISCLSIAVGLPN
VGEHFETWNAGILGPVTLDGLNEGRRDLTWQKWTYKVGLKGEALSLHSLSGSSSVEWGEP
VQKQPLSWYKAFFNAPDGDEPLALDMSSMGKGQIWINGQGIGRYWPGYKASGTCGICDYR
GEYDEKKCQTNCGDSSQRWYHVPRSWLNPTGNLLVIFEEWGGDPTGISMVKRIAGSICAD
VSEWQPSMANWRTKGYEKAKVHLQCDHGRKMTHIKFASFGTPQGSCGSYSEGGCHAHKSY
DIFWKSCIGQERCGVSVVPDAFGGDPCPGTMKRAVVEAICG

Transcript Sequence

Transcript ID

Zm00001d044290_T031
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:224367637:224370566:1 gene:Zm00001d044290 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-galactosidase 1
Sequence

ATCCCTTATGTTGATCAAGTTGACTGAGTTCCTCCCCTTCACTTCCTCAGGTTTGCTGAG
AGAACCGAAATGGGGTCACTTGAAGGAGTTGCATAAAGCTATCAAGCTTTGTGAACCAGC
ATTGGTTGCAGGAGACCCAATTGTAACTTCACTTGGCAATGCTCAGCAGGCATCTGTTTT
TAGATCAAGCACCGATGCCTGTGTGGCCTTCCTTGAGAACAAGGATAAAGTATCTTATGC
TAGGGTATCATTCAATGGAATGCATTATGATCTACCTCCCTGGTCCATAAGTATTCTCCC
AGACTGCAAAACAACAGTCTACAACACCGCCAGCGTTGGAAGTCAGATTTCACAAATGAA
AATGGAATGGGCTGGAGGATTCACATGGCAATCATACAATGAGGATATAAACTCCTTGGG
TGACGAATCATTTGCAACAGTTGGATTACTGGAACAGATAAATGTGACAAGGGATAACAC
AGACTACTTATGGTATACAACATACGTTGATATTGCTCAGGATGAGCAGTTTCTCAGCAA
TGGGAAGAATCCTATGCTAACTGTTATGTCAGCTGGTCATGCTTTGCATATTTTCGTTAA
TGGACAACTAACAGGGACTGTGTATGGAAGCGTAGAAGATCCAAAATTGACATATAGTGG
AAATGTGAAACTTTGGTCAGGCAGTAACACTATTTCATGCTTAAGTATAGCAGTTGGTCT
CCCGAATGTGGGAGAACATTTTGAGACTTGGAATGCTGGAATTCTAGGTCCTGTGACACT
GGATGGCCTAAATGAGGGAAGAAGAGATCTCACATGGCAGAAATGGACCTATAAGGTTGG
TCTGAAAGGTGAGGCTTTGAGTCTTCATTCACTTAGTGGCAGCTCTTCAGTAGAGTGGGG
AGAACCTGTTCAGAAGCAGCCTCTGTCATGGTACAAGGCTTTCTTCAATGCACCTGATGG
TGATGAGCCATTAGCTTTGGATATGAGTAGCATGGGTAAAGGTCAAATCTGGATAAATGG
ACAAGGTATTGGAAGGTACTGGCCTGGCTACAAAGCTTCTGGAACCTGTGGGATCTGTGA
TTACCGTGGAGAGTATGATGAAAAGAAGTGCCAAACCAACTGTGGTGACTCTTCTCAGAG
ATGGTACCATGTTCCTCGTTCATGGCTTAATCCGACGGGGAACCTTTTGGTGATATTTGA
GGAGTGGGGCGGTGATCCTACCGGAATTTCGATGGTGAAAAGAATAGCAGGGAGTATCTG
CGCTGATGTCTCCGAATGGCAGCCATCGATGGCAAACTGGCGAACAAAAGGCTATGAGAA
AGCCAAGGTCCACCTCCAGTGTGATCATGGACGGAAAATGACTCACATAAAATTTGCCAG
CTTTGGCACACCACAGGGCTCCTGCGGGAGCTACTCTGAAGGCGGTTGCCATGCACACAA
GTCATACGACATATTTTGGAAGAGCTGCATTGGTCAAGAGCGCTGTGGGGTAAGCGTGGT
TCCAGATGCATTTGGTGGAGATCCATGCCCTGGGACTATGAAAAGAGCCGTTGTTGAGGC
TATATGCGGCTGAGTCATATGATCCATATAACGTACTGGTTTCTACAATAATGTTACCCT
ATATCAAGCTGGCAAGAGGTGAAAGTGGCGGCAACTGCGACACACGGATTGCCAGGGTTT
ACAGGAATTAGTTGTATGTTAGATTTAAGCATCGTATGTGTATGTAACTTAGGTCACATG
AGACTTGCATGGAAGAAGTGGTTAGGACCCTAGCTGTGAGAAACTAAGTCTTGTAGCTCT
CTACACAGTAGAATTGGTCTGGCAGGTGAGGGTGCAGATGAGACTCTGCTTTATTACCTG
AGTCCATGTGCGCGGTGGCTCTTGGGTTGGAGATTGCCAAAAGGCCAGCAATTGGCTTTG
CATTATCTGGTCATTCATTTTTTTGGTCATTGGAGGGTGCAATGTAAATGTTCAGGGTCA
ATCATTTATGAATTTTTCTAGCTAGTAATGAAACAGTAAAGAAAATGTTGGTTCAGATTA
TAAAACACCAGTTATCT