Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044253_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:223073135:223075832:-1 gene:Zm00001d044253 gene_biotype:protein_coding transcript_biotype:protein_coding description:IQ domain-containing protein IQM5
Sequence	ATGAGTCTGGGGCTGCTCAACACAGAGCGCAACCACCTTCTCTCCCCGAAGCCGCAGAGC CCTCGGGATGCCGCCGTGTCGTCGCTGCTGAGGTCACCCAGGGCGTCCTGCGGCTCCTGC AGCCAGAGCCCCAAGCCGAAGCCCACCAAGATGGCGCACGGCGGCCTGGAGCGCTCGCTC AGCTTCAAGAACTGGGAGGCGGACGACAGCCGGGGCGGCATCAACGGAGCGCGCCCGGGC GCCCTGGCGCTGCAGCAGCAGGAGAGCCCCCGGCGCGTGGTCTCCGTGTCCCCGCAGGCG CAGGCCATGATCGAGTACATCTCCCCTCGCCCCCGCGTGGAGCTGGACCAGGCGGCCACC ACGCTGCAGAAGATGTACAAGGGCCTGCGCACGCGCCGCAGCCTCGCCGACGGCGCCATC ATCGCCGAGGAGCTGTGGTGGAAGACGGTCGACTCGGTGTACCTCAACATCAAGTCCATC TCCTTCTTCGACGAGGACAAGCAGGAGACCGCCGCGTCCCGCTGGTCCAGGGCCGGCAAG AGGATCGCCAAGGTCGGCAAGGGGCTCTCCAAGGACGACAAGGCGCAGAAGCTCGCGCTC CAGCACTGGCTCGAAGCTATTGACCCGCGCCACCGCTACGGCCACAACCTGCATCTCTAC TACGACATCTGGTCCGCCAGCTCCAGCTGCGAGCCCTTCTTCTACTGGCTGGACGTCGGC AACGGCAGGGACTTGCATCACCACAAGTGTCCACGGAGCAAGCTCAACTCGCAGCTCATC ATGTACCTCGGACCAAACGAGAGGGCGGCGTACGAAGTCGTCGTGGAGGAAGGGCGGCTC GTGTACAGGCAGAGCGGGGACCCGGTGAGCACGAACGAGGAGTCCAAGTGGATCTTCGTG CTGAGCACCAGCAGGTCGCTGTACGTGGGGCAGAAGCGCAAGGGCAAGTTCCAGCACTCG AGCTTCCTGTCCGGGGCCGCCACCTCGGCCGCCGGGAGGCTGGTCGCCAAGGAGGGCGTC CTCAGGGCGATATGGCCCTACAGCGGCCACTACCTCCCGACCGAGGAGAACTTCAGGGAG TTCATCGCCTTCCTCGAGGACAACAACGTCGACCTCGCCAACGTCAAGCGATGCTCGGTG GACGACGACGAGTTCCCGTCGTTCAAGAAGCCGGCGGCGGGTACAGAAGAGAAGCAGCAG GCAGCAGAGGAGGCAGCCCCAGTGGCGACAGAAGAGGAGCCACGACCCGTGCCGGAGCTG CCCGCGGTGGACATCGTGAAGGAGGGCACGGGCACGGCCGCGGACGCGGAGCCGCCGAAG ACGGCGATGGGCAGGCGGCCGTCGTTCAAGTGGTCGACGCCCACGGGCGCGCGCATCGGC TGCCTCCAGAACTACCCGGCCGACGTGCAGAGCATGGCCCTGGAGCAGGTGAACCTGTCG CCGAGGGTGGCGGCGGTGGCGCCGTCGCCGCGCCTGCCCATCCCGTCGCCGCGCCCCAGC CCCAGGATCAGGCTGTCGCCCGGCCTGCACTACATGGGCTGCCCCACCCCGACGGGCGCC AGCAGGCTCGCGACCCCGACCCCGGCGTGCAGGCGCTCCTCGCCCAAGCAGCAGCAGCAG CAGCAGCACTTGATGGGGTTCCGCGCGCCGGCCGTGGCGCTCACGCTCCCCAAGCACAAG GCCAAGTGA

Peptide Sequence

PEP ID	Zm00001d044253_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:223073135:223075832:-1 gene:Zm00001d044253 transcript:Zm00001d044253_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:IQ domain-containing protein IQM5
Sequence	MSLGLLNTERNHLLSPKPQSPRDAAVSSLLRSPRASCGSCSQSPKPKPTKMAHGGLERSL SFKNWEADDSRGGINGARPGALALQQQESPRRVVSVSPQAQAMIEYISPRPRVELDQAAT TLQKMYKGLRTRRSLADGAIIAEELWWKTVDSVYLNIKSISFFDEDKQETAASRWSRAGK RIAKVGKGLSKDDKAQKLALQHWLEAIDPRHRYGHNLHLYYDIWSASSSCEPFFYWLDVG NGRDLHHHKCPRSKLNSQLIMYLGPNERAAYEVVVEEGRLVYRQSGDPVSTNEESKWIFV LSTSRSLYVGQKRKGKFQHSSFLSGAATSAAGRLVAKEGVLRAIWPYSGHYLPTEENFRE FIAFLEDNNVDLANVKRCSVDDDEFPSFKKPAAGTEEKQQAAEEAAPVATEEEPRPVPEL PAVDIVKEGTGTAADAEPPKTAMGRRPSFKWSTPTGARIGCLQNYPADVQSMALEQVNLS PRVAAVAPSPRLPIPSPRPSPRIRLSPGLHYMGCPTPTGASRLATPTPACRRSSPKQQQQ QQHLMGFRAPAVALTLPKHKAK

Transcript Sequence

Transcript ID	Zm00001d044253_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:223073135:223075832:-1 gene:Zm00001d044253 gene_biotype:protein_coding transcript_biotype:protein_coding description:IQ domain-containing protein IQM5
Sequence	GTCGACTCGTCGTCCATCCCTCCTCCTCCCTTCCACCGGCCCCGGCAACGACCGGTCGCT CGGTCTCCGTCGTCGTCTTCTTCCGTTCCTTCCGCCCCCTCTGCAACGCACAACTTGGAC TCGTACTCCTCTGCTCCACCGTAGACGCGCCTAGCTAGCTCATGCCATATATAGGCGCCC CCATCCGCGCTGGGAGAACCACACGAGGCTGAACGCTTGAACCTGAACCTCCAAAGCAGC AACCCCAGCAGCTTTAGCTCCTCCTCATCGCAGCCGCAGCGCCGTCCCCTACTCTTCCAG CGACCAACTGCTGTCTCTCCGGCGACGGCAGAACCGTCTCTGCAGGTGCAGGGAGGGACC CGGGAGATGAGTCTGGGGCTGCTCAACACAGAGCGCAACCACCTTCTCTCCCCGAAGCCG CAGAGCCCTCGGGATGCCGCCGTGTCGTCGCTGCTGAGGTCACCCAGGGCGTCCTGCGGC TCCTGCAGCCAGAGCCCCAAGCCGAAGCCCACCAAGATGGCGCACGGCGGCCTGGAGCGC TCGCTCAGCTTCAAGAACTGGGAGGCGGACGACAGCCGGGGCGGCATCAACGGAGCGCGC CCGGGCGCCCTGGCGCTGCAGCAGCAGGAGAGCCCCCGGCGCGTGGTCTCCGTGTCCCCG CAGGCGCAGGCCATGATCGAGTACATCTCCCCTCGCCCCCGCGTGGAGCTGGACCAGGCG GCCACCACGCTGCAGAAGATGTACAAGGGCCTGCGCACGCGCCGCAGCCTCGCCGACGGC GCCATCATCGCCGAGGAGCTGTGGTGGAAGACGGTCGACTCGGTGTACCTCAACATCAAG TCCATCTCCTTCTTCGACGAGGACAAGCAGGAGACCGCCGCGTCCCGCTGGTCCAGGGCC GGCAAGAGGATCGCCAAGGTCGGCAAGGGGCTCTCCAAGGACGACAAGGCGCAGAAGCTC GCGCTCCAGCACTGGCTCGAAGCTATTGACCCGCGCCACCGCTACGGCCACAACCTGCAT CTCTACTACGACATCTGGTCCGCCAGCTCCAGCTGCGAGCCCTTCTTCTACTGGCTGGAC GTCGGCAACGGCAGGGACTTGCATCACCACAAGTGTCCACGGAGCAAGCTCAACTCGCAG CTCATCATGTACCTCGGACCAAACGAGAGGGCGGCGTACGAAGTCGTCGTGGAGGAAGGG CGGCTCGTGTACAGGCAGAGCGGGGACCCGGTGAGCACGAACGAGGAGTCCAAGTGGATC TTCGTGCTGAGCACCAGCAGGTCGCTGTACGTGGGGCAGAAGCGCAAGGGCAAGTTCCAG CACTCGAGCTTCCTGTCCGGGGCCGCCACCTCGGCCGCCGGGAGGCTGGTCGCCAAGGAG GGCGTCCTCAGGGCGATATGGCCCTACAGCGGCCACTACCTCCCGACCGAGGAGAACTTC AGGGAGTTCATCGCCTTCCTCGAGGACAACAACGTCGACCTCGCCAACGTCAAGCGATGC TCGGTGGACGACGACGAGTTCCCGTCGTTCAAGAAGCCGGCGGCGGGTACAGAAGAGAAG CAGCAGGCAGCAGAGGAGGCAGCCCCAGTGGCGACAGAAGAGGAGCCACGACCCGTGCCG GAGCTGCCCGCGGTGGACATCGTGAAGGAGGGCACGGGCACGGCCGCGGACGCGGAGCCG CCGAAGACGGCGATGGGCAGGCGGCCGTCGTTCAAGTGGTCGACGCCCACGGGCGCGCGC ATCGGCTGCCTCCAGAACTACCCGGCCGACGTGCAGAGCATGGCCCTGGAGCAGGTGAAC CTGTCGCCGAGGGTGGCGGCGGTGGCGCCGTCGCCGCGCCTGCCCATCCCGTCGCCGCGC CCCAGCCCCAGGATCAGGCTGTCGCCCGGCCTGCACTACATGGGCTGCCCCACCCCGACG GGCGCCAGCAGGCTCGCGACCCCGACCCCGGCGTGCAGGCGCTCCTCGCCCAAGCAGCAG CAGCAGCAGCAGCACTTGATGGGGTTCCGCGCGCCGGCCGTGGCGCTCACGCTCCCCAAG CACAAGGCCAAGTGATCTGCTTGCTGCCCATTGACACCTCGCCGCAGCGGCGTTTTCCGA GGTGTTGCTGCGTTGCGCCGGGTTAACAATTTTGTTGATTGGTTTGTTGCGTTCTCTGAT CGGCTACCATTCTTTCGTACGTTAGTTCGTTCCTGGGTCATCGTATTTTGACCTCACTCT GGTAGTCTGGTAGCACTCTGGTGCTTGCGCTCTGCGTGCACCACTGCTGTACAACTCTAA ACTACAGCCTGCAATGCAAGGCCCTACTGTAACCTGAACCTGCATCCTGCAGTTCCTCAG ACAAAATGACTGCAGGTTCCGTTTTGAATAAAAGGATTCGTTCATGAATA