Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044232_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:222542879:222548835:-1 gene:Zm00001d044232 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pco135758 description:Protein EARLY FLOWERING 3
Sequence	ATGACGAGGGGAGGCGGTGGACAAGGAGGCAAGGAGGAGCCGGGGAAGGTGATGGGTCCG CTGTTCCCGCGGCTCCACGTCAGCGACGCAGGCAAGGGCGGCGGCCCGCGGGCTCCGCCA AGGAACAAGATGGCGCTCTACGAGCAGTTCACCGTGCCGTCCAACCGCTTCAGCTCCCCC GCGGCCTCCGCCCGCGCCGCGGGGGCCAGCCTCGTGCCCTCCACGGCGGCTGCCCAGGTT TATGGTTATGACAGGACGCTGTTCCAGCCCTTCGACGTGCCTTCAAATGAGCCTCCTCGT TCATCTGAAAAGTTCAAAGGAAACACTATCAACGGGCAGTCTAATAGTACAAGAAGAGAA CCTTTGAGGATGTCCTCACAGACCAAGAACAAGGACGTCTGTGCTTCAAAATCAATTGCC AAGTGCACCTCACAGCATAGAGTGGGCAACACCATCATGTCTTCTGGAAAGAAAGTGGTC AGTGATGATGAATTTATGGTTCCTTCCATCTGTTATCCTAGATTTTATCGACAGTCTACT CAAGATCATGCAGATAAATCAAAACCCCAATCTACTACAAACCCACACAAAAGTCCTGCA ATGTCCAAATCATCTGTAGAGTGCTATAGTACTGTGAACAAGCACTTGGACAAAATCAAT GAAGCTGATAGGAGGTTAATGAACTCTCCAAAGGTTAAGGAGAAAGAAGCAGTGCAAGGA TCAAAAGCTGTGGAAGTTAAAGAAAAGAGTTCATCATTTCAGGCATCAGAAAAGTTCAAA GACAAATATGCTAAGCTATGTCAAATGAGGAATAAGGCAAGTAATATAAATCATTGTGAC AACAACGGTTGCCAACCTGCAAGCGTGAATGGAAATTTCACAGAAGCAAAGAACCCTACA GCAGCTAGAAATACATCTTCCTGTAAACCATGTACTGATGTAGATAGCTCTAACAGGAAG TCTAATTTACTGGAAAGAAGCCCACGGGAAGTTGGTGCTAAGAGAAAAAGAGGACATCAC AATGGAGAGCAAAATGATGATTTATCTGACTCCTCAGTGGAATGCATACCTGGGGGGGAG ATCTCTCCAGATGAAATTGTTGCTGCTATTGGTCCAAAGCATTTCTGGAAAGCAAGAAGA GCTATTCAGAAGTAA

Peptide Sequence

PEP ID	Zm00001d044232_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:222542879:222548835:-1 gene:Zm00001d044232 transcript:Zm00001d044232_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pco135758 description:Protein EARLY FLOWERING 3
Sequence	MTRGGGGQGGKEEPGKVMGPLFPRLHVSDAGKGGGPRAPPRNKMALYEQFTVPSNRFSSP AASARAAGASLVPSTAAAQVYGYDRTLFQPFDVPSNEPPRSSEKFKGNTINGQSNSTRRE PLRMSSQTKNKDVCASKSIAKCTSQHRVGNTIMSSGKKVVSDDEFMVPSICYPRFYRQST QDHADKSKPQSTTNPHKSPAMSKSSVECYSTVNKHLDKINEADRRLMNSPKVKEKEAVQG SKAVEVKEKSSSFQASEKFKDKYAKLCQMRNKASNINHCDNNGCQPASVNGNFTEAKNPT AARNTSSCKPCTDVDSSNRKSNLLERSPREVGAKRKRGHHNGEQNDDLSDSSVECIPGGE ISPDEIVAAIGPKHFWKARRAIQK

Transcript Sequence

Transcript ID	Zm00001d044232_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:222542879:222548835:-1 gene:Zm00001d044232 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pco135758 description:Protein EARLY FLOWERING 3
Sequence	ATACTCAACCGCCAGCGTCTCCACTCTCCGGTCTCCCTCTCATGGTGGAGCCCACCTCCG CCTTTGTGGATCAGAGCGAGCATTCCTTTCCCTTCCCTTCCCTGGCATCAGAATCAAACG TGTCCCCGCAGACGCTCCCAATCCCATGCGCCCCTCTGCTCTCACGGTTTGATTTCCCTT TCAGTTGGGCCGCCATGGCCGCGGTAGCAGCTGTGCGCCTGCACCCCGGCCTCCCCCATC GCCGGCCCTGACACTGGGTAAACGTGGTGGCTGAAGCTGCTGCTGAGGATTCGGGATCTT CTTGCTGCCGCCACGAGCTGCCTGCGTGATATTGACACGGCGCGCTCCCCTGGCTCCTGG GCATGACGAGGGGAGGCGGTGGACAAGGAGGCAAGGAGGAGCCGGGGAAGGTGATGGGTC CGCTGTTCCCGCGGCTCCACGTCAGCGACGCAGGCAAGGGCGGCGGCCCGCGGGCTCCGC CAAGGAACAAGATGGCGCTCTACGAGCAGTTCACCGTGCCGTCCAACCGCTTCAGCTCCC CCGCGGCCTCCGCCCGCGCCGCGGGGGCCAGCCTCGTGCCCTCCACGGCGGCTGCCCAGG TTTATGGTTATGACAGGACGCTGTTCCAGCCCTTCGACGTGCCTTCAAATGAGCCTCCTC GTTCATCTGAAAAGTTCAAAGGAAACACTATCAACGGGCAGTCTAATAGTACAAGAAGAG AACCTTTGAGGATGTCCTCACAGACCAAGAACAAGGACGTCTGTGCTTCAAAATCAATTG CCAAGTGCACCTCACAGCATAGAGTGGGCAACACCATCATGTCTTCTGGAAAGAAAGTGG TCAGTGATGATGAATTTATGGTTCCTTCCATCTGTTATCCTAGATTTTATCGACAGTCTA CTCAAGATCATGCAGATAAATCAAAACCCCAATCTACTACAAACCCACACAAAAGTCCTG CAATGTCCAAATCATCTGTAGAGTGCTATAGTACTGTGAACAAGCACTTGGACAAAATCA ATGAAGCTGATAGGAGGTTAATGAACTCTCCAAAGGTTAAGGAGAAAGAAGCAGTGCAAG GATCAAAAGCTGTGGAAGTTAAAGAAAAGAGTTCATCATTTCAGGCATCAGAAAAGTTCA AAGACAAATATGCTAAGCTATGTCAAATGAGGAATAAGGCAAGTAATATAAATCATTGTG ACAACAACGGTTGCCAACCTGCAAGCGTGAATGGAAATTTCACAGAAGCAAAGAACCCTA CAGCAGCTAGAAATACATCTTCCTGTAAACCATGTACTGATGTAGATAGCTCTAACAGGA AGTCTAATTTACTGGAAAGAAGCCCACGGGAAGTTGGTGCTAAGAGAAAAAGAGGACATC ACAATGGAGAGCAAAATGATGATTTATCTGACTCCTCAGTGGAATGCATACCTGGGGGGG AGATCTCTCCAGATGAAATTGTTGCTGCTATTGGTCCAAAGCATTTCTGGAAAGCAAGAA GAGCTATTCAGAAGTAAGTATATGGTGCTTGAGTAGCTGTTTTGTAGTTTTGTACCAAGT ATTTGTAGCATTCTTTAGACAATACTATTCATATGTTTCACTCTGCTTATTTCCTTTTTC TTTTAGTTTTCAGTTAATTGTCATATGGAAGACAAAAGTATGAAGATGATAAGTCTGTTG TTTGGTTTTCAGTACCTAACTATTCTGTTGTACTATTAAATATAAACTGTGGATAATAAT GAATGCCTTCAATTTTGATTCTTTTAAGTAGAAAACATGGTAGTTTCATCCAAAAGAATA GTATGTTGCTTGTAAGACTGATATTGTGAATATTTCTTTCTTGCTTTCTGGATTGCTGCA TAATGCCTTTTTTTATGTTTTACACTCTGTCCTGTTAAAATCTACAGTCAGCAGAGGGTT TTTGCTGTCCAAGTGTTCGAGCTGCATAAGCTGATAAAAGTGCAGAAATTAATCGCGGCA TCTCCACATCTGCTTATTGAAGGTGATCCTGTCCTTGGCAATGCATTAACAGGAAAAAGG AACAAACTTCCTAAAGGAAATTCGAAAGTTCAGACCCTGTCAATCACAAACAAAGATGAT ATCCAGCCAACCCTAGAGCAACCAGAGTTATCAAAACAAGACACAGAAGGAAACTTATTG GCCCATTCTCATGATGATGGACTTGGTGACAACCATCATAATCAAGCTGCAACAAATGAA ACCTTTACAAGCAACCCTCCAGCTATGCATGTTGCTCCTGACAACAAACAGAATAACTGG TGCATGAATCCACCGCAGAATCAATGGCTTGTCCCAGTTATGTCGCCTTCTGAAGGTCTT GTCTATAAGCCTTTTGCCGGCCCTTGTCCCCCAGTTGGAAATCTGCTGACACCATTTTAC GCCAACTGTGCTCCGTCAAGGCTGCCTTCTACACCATATGGCGTTCCTATTCCTCACCAG CCACAGCACATGGTCCCTCCTGGTGCCCCTGCCATGCATATGAACTACTTCCCGCCTTTC AGTATGCCAGTGATGAATCCAGGAACACCAGCATCTGCAGTGGAGCAAGGGAGCCATGCT GCTGCGCCACAGCCTCATGGGCACATGGACCAGCAGTCGCTGATCTCATGTAACATGTCA CACCCGAGTGGCGTTTGGAGGTTTCTTGCATCAAGGGACAGCGAGCCACAGGCCAGCAGC GCCACCAGCCCTTTCGACAGGCTCCAAGTCCAAGGTGATGGAAGTGCTCCGTTGTCATTC TTTCCCACGGCTTCAGCTCCGAATGTCCAGCCTCCGCCCTCATCTGGAGGCCGGGACCGG GACCAGCAGAACCATGTAATCAGGGTTGTTCCGCGTAACGCACAGACTGCTTCAGTCCCG AAAGCCCAACCTCAGCCGTCATCCGGAGGCCGGGACCAAAAGAACCATGTAATCAGGGTT GTTCCGCATAACGCGCAGACTGCTTCGGAGTCAGCAGCGTGGATCTTCCGGTCAATACAA ATGGAGAGGAACCAAAATGATTCGTAGCTGGTTACCATATACTTTCGTGTCATCCGATGG CAGCTTAGTGCAGCATTGCAGTTTACAGGGCTACCCGAGCTGCAGATTATGGTGGCTCCT GTATTCTGACCACTGATTGCGCTTTACCCGATCGTCATAGATATTGGATGATATGATCTT GTGTTCTATGCAGAGTTGTAAGCCAAAGTTGTGCCCCTGAAGACTGAAGTGACAGCCCTG AAGTTGGGAGTCCTTCCTGATTGTGCTATGACTGGAATTGGTATATATATAGGTTACTTG AACGGTTTCACTGTGTTGAGCTCACCACACGGCCGCGCTTCTGTAACATACAATACAATA GACTATGAGTGGTACAGTAGGAAGCAGCAGTCAGAAAATGACTGCTGGTACCATGCTACG GGGTCGCTATAGATTGATGTGTACCGGTACTCTGGTTCTGGTAGTATATGCTGCTGTATA ATTCAGTGTTTAATTATCTATATATTGTACATTAGCTGTCAAGCCTGTAAGGCATTGTAT TGTGG