Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044213_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:3:221966578:221974763:-1 gene:Zm00001d044213 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cleavage and polyadenylation specificity factor subunit 3-II
Sequence	ATGGCAATCGAGTGCCTCGTGCTAGGGGCGGGGCAGGAGGTGGGTAAGAGCTGCGTGGTG GTGACCATCGGCGGGAAGCGCGTCATGTTCGACTGCGGCATGCACATGGGCTACCACGAC GACCGCCACTACCCGGACTTTGCGCGCGCGCTCGCTGCCTGGGGGGCGCCCGACTTCACC ACCGCTATCTCCTGCGTGGTCATCACGCATTTCCACATGGATCATATCGGGGCACTGCCC TACTTCACCGAGGTTTGCGGCTACCACGGCCCCATCTACATGACGTATCCAACAAAGGCT TTAGCTCCATTTATGCTCGAGGATTATCGGAAAGTAACGATGGGTCAGAGAGGTGAGGAA AAGCAATATAGCTACGAAGATATTCTTAGGTGTATGAAGAAAGTCACACCAATGGACTTG AAGCAGACTGTTCAAGTAGATAAAGACCTTGTGATCCGTGCCTATTATGCTGGACATGTT ATAGGGGCTGCCATGATTTATGCAAAAGTTGGGGATGCTGCTATGGTATACACTGGGGAT TACAATATGACACCAGATAGACATCTTGGGGCCGCACAGATTGATCGTCTGAAGTTGGAT GTATTGATAACAGAGTCCACATATGCTAAATCTATACGTGACTCAAAGCCTGCCCGAGAG AGGGAGTTTTTAAAAGCGGTACATAAATGTGTTTCTGGTGGAGGTAAAGTTCTAATTCCA ACGTTTGCTCTGGGAAGAGCTCAGGAACTATGTATGTTACTGGATGACTATTGGGAGAGG ATGGGCTTGAAAGTTCCTATTTATTTTTCAGCTGGTTTAACCATTCAAGCTAATGTGTAC TACAAAATGTTGATTGGGTGGACTAGTCAAAAGATCAAGGACAGCCATACAGTGCATAAT CCATTTGACTTCAAGCATGTTTGCCACTTTGAACGTTCCTTCATTAACAACCCTGGTCCC TGTGTACTTTTTGCAACACCTGGTATGATTACTGGGGGATTTTCCCTTGAGGCGTTTAAA AAATGGGCACCATCAGAGAAGAATCTGGTTACACTTCCAGGATATTGTGTTTCTGGAACC ATTGGTCATAAGTTGATGTGTGGGAAACCTACAAGGGTTGATTACGAGGACACTCATATT GATGTCAGATGTCAGGGGGAAGCCATGTAA

Peptide Sequence

PEP ID	Zm00001d044213_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:3:221966578:221974763:-1 gene:Zm00001d044213 transcript:Zm00001d044213_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cleavage and polyadenylation specificity factor subunit 3-II
Sequence	MAIECLVLGAGQEVGKSCVVVTIGGKRVMFDCGMHMGYHDDRHYPDFARALAAWGAPDFT TAISCVVITHFHMDHIGALPYFTEVCGYHGPIYMTYPTKALAPFMLEDYRKVTMGQRGEE KQYSYEDILRCMKKVTPMDLKQTVQVDKDLVIRAYYAGHVIGAAMIYAKVGDAAMVYTGD YNMTPDRHLGAAQIDRLKLDVLITESTYAKSIRDSKPAREREFLKAVHKCVSGGGKVLIP TFALGRAQELCMLLDDYWERMGLKVPIYFSAGLTIQANVYYKMLIGWTSQKIKDSHTVHN PFDFKHVCHFERSFINNPGPCVLFATPGMITGGFSLEAFKKWAPSEKNLVTLPGYCVSGT IGHKLMCGKPTRVDYEDTHIDVRCQGEAM

Transcript Sequence

Transcript ID	Zm00001d044213_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:221966578:221974763:-1 gene:Zm00001d044213 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cleavage and polyadenylation specificity factor subunit 3-II
Sequence	GGGGAAAAAAACCCCGGCCTGCCACCCTACTTCATCCTCGAGTCGACTTGTGCGCCGCCA TTCTCCGTCGCCGCGGTCTCGCGGGCCCGCCGCCGTCCTAGCCGCCCTGTCCCCGCCCTC TCCGTCTCGCGCCCCACGCGGCCCTTGTCCATCTTTTCCGTCGCCGGCTCGTGCGGTCCG ACGCCTGCCACCGGTTCCTCCTCTCGAGAAAGGCGGCGGCGCCCGAGAGAGCTTCTTTGA GGGAGGATAAGGCGGCGCGGAGCGTCTCTGAGCGGCTCAGGCCCCTCCGGCGCTGAGCTT TCCTCCGGCGTTGTGTGTGCCTGAGTTGTTGACTCCCAATTGAAGCGTGGTCAAATTACC TCGGCTCCGGTATGGGTTGGAGCTCTTTATGGGTTGCTAAAGCGTTTAGAGTGTGGCTCT AGGCGTGGATTTTCACCAATGGCAATCGAGTGCCTCGTGCTAGGGGCGGGGCAGGAGGTG GGTAAGAGCTGCGTGGTGGTGACCATCGGCGGGAAGCGCGTCATGTTCGACTGCGGCATG CACATGGGCTACCACGACGACCGCCACTACCCGGACTTTGCGCGCGCGCTCGCTGCCTGG GGGGCGCCCGACTTCACCACCGCTATCTCCTGCGTGGTCATCACGCATTTCCACATGGAT CATATCGGGGCACTGCCCTACTTCACCGAGGTTTGCGGCTACCACGGCCCCATCTACATG ACGTATCCAACAAAGGCTTTAGCTCCATTTATGCTCGAGGATTATCGGAAAGTAACGATG GGTCAGAGAGGTGAGGAAAAGCAATATAGCTACGAAGATATTCTTAGGTGTATGAAGAAA GTCACACCAATGGACTTGAAGCAGACTGTTCAAGTAGATAAAGACCTTGTGATCCGTGCC TATTATGCTGGACATGTTATAGGGGCTGCCATGATTTATGCAAAAGTTGGGGATGCTGCT ATGGTATACACTGGGGATTACAATATGACACCAGATAGACATCTTGGGGCCGCACAGATT GATCGTCTGAAGTTGGATGTATTGATAACAGAGTCCACATATGCTAAATCTATACGTGAC TCAAAGCCTGCCCGAGAGAGGGAGTTTTTAAAAGCGGTACATAAATGTGTTTCTGGTGGA GGTAAAGTTCTAATTCCAACGTTTGCTCTGGGAAGAGCTCAGGAACTATGTATGTTACTG GATGACTATTGGGAGAGGATGGGCTTGAAAGTTCCTATTTATTTTTCAGCTGGTTTAACC ATTCAAGCTAATGTGTACTACAAAATGTTGATTGGGTGGACTAGTCAAAAGATCAAGGAC AGCCATACAGTGCATAATCCATTTGACTTCAAGCATGTTTGCCACTTTGAACGTTCCTTC ATTAACAACCCTGGTCCCTGTGTACTTTTTGCAACACCTGGTATGATTACTGGGGGATTT TCCCTTGAGGCGTTTAAAAAATGGGCACCATCAGAGAAGAATCTGGTTACACTTCCAGGA TATTGTGTTTCTGGAACCATTGGTCATAAGTTGATGTGTGGGAAACCTACAAGGGTTGAT TACGAGGACACTCATATTGATGTCAGATGTCAGGGGGAAGCCATGTAAATCACTAGTGTT TTAAACACTGTTGAAGTCTGGCTTTTAAATTCGATCCATATCAATCCCCACTTATCGTTC TGCATGGGTGCTTACTCGAGGCCCTTAGTTGTCTATTGCAGTTGGCTGGCTGTGGTCGTT TTTGTTTCTGTCTCTCAGTTTTTTGTGAGTAGTATGTCTGTATGTATTGAGGAGCTTTCC TAGTCCCCTCCCTGTTTTGCACATTTTATACTTTATCTTAATCTACTCATTACC