Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044197_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:3:221729747:221732190:1 gene:Zm00001d044197 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Pentatricopeptide (PPR) repeat-containing protein-like
Sequence	ATGGTGGCCATGGAGGAATCCGGCATCCCCATTGGTGCCTCCACCTGGAACGCCGTCATC GCTGGGTGCGTCCGAGCTGAGAACGGAGAGCTCGCCATCGAGCTGCTAGGCAAAATGGTT TCGGTTGGGGGAGTTGTGCCCAGTGTGGCCACGTTCAACACCGTGCTCCACGTGATTTCG GCGTTGCGCGGGGTGAACGTGCTCCGAGAGTTGCACGCATTTGTGCTGCGCAACGCTGAG GTTGTGGGACTTGGGCCTGTGGATTTGGATCGACTCCAGGAATCCCTGGCGGCAGGATAC ATGTGCAGCTCCTGTGTCCAGTACGCAGGCCGTGTGTTTCGTGATGTCAGGATAAGCACT TGCTTCCTGGGCAACCTGATGATATCGGGATTTCTTGACACGGGGCAGCGGAATCAAGCC TTGGGTGTTCTGCGAGAAATGGCGTTTGGCTGTGGTCATGAAGCTCAGCATCTGCCATCG GCTTCGCTTACGCTGGTCCTCCCTGAGGTCAATCTGGCAACAAAGAGAGGCCTAGAGATC CATGCTTATGCCTATCGCCATGGTTTTGAGTGTGACACCTCGGTCTGCAATGCCTTGATG GCAATGTATGCAAGAGGGGGCAAGATATGCCGGTCAGACAAGGTTTTCCAAGGACTGGAT GCTAAAGATGTCGTGTCATGGAATACTATGATTTCAGGCTATGCCACGGTTCATGATTTT GATCTCTCATTTGAGCTGTTCCGTGAAATGCAACGTAATGGTACCAGACCTGATGACTAC ACATTTACATCAGTGCTCAACGCCTGCAGCTTTGCCTGCAATCACAGGACAGTAATGGCA TTGCACGGGCAAATGATAAGGATGGGGCTTTGCCATTCCTATGTTGATGATATGAATTCT CTCATGGATGCTTATGGAAAGTGTGGTTTCATTGCTGAAGCTCAGAAGATATTTGATGAA ACCGAGCGAAAGGATACAGTTTCGTGGAATATCATCATTTCGTGCTACGGCTACAGCGGT TTTCCTCAACGAGCAATCAGGCTTTTCCATCAGATGCAAGATCAAAGCTACAAACCTACC AGAGTCACTTTCATTGCTGTGCTAGCGGCATGCAGCCATGCAGGCTTAGTAGACGAAGCA CTGCGTTATTTCGAGGCAATGCACGGAGACTACAGCATTACCGCTGATGAGGCTCACTAT GCCTGCATCGTTGACTGTTTTGGCAGAGCAGGTCAGCTCCAACGGGCTTATGAGTTCATC AGAGGAATGCCGGTGGTTCCAAATGCTTGTGTGTGGGGTGCCCTACTTAGCAGTTGCAGG ATACACGGAAATATAGGCCTAGCAGAAATTGCCGCGAAGAAGCTCGTTGAGCTGGACCCT CAGCATTCTGGATACTGGATGCTGCTAAAGGATATGTACTCAAAAGCCAAGAGATGGAAT GATGTATCGCAACTTCGAGCTGCTATGAGAGATAATGGCGTTAAGAAGTGCCCAGGTTAT AGTTGGATTGAGGGGCGAGATAGCGAGGTCCACAGATTCCTTACCGCTGACAAGCTTCAC TCACAAAGCCACCAGATATACGAAGTACTAGGTGGGTTAACCGAGCAGTTGATGGATGAA GGATATGAAATAGATGTCGATTTGACATATACTGAGTGA

Peptide Sequence

PEP ID	Zm00001d044197_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:3:221729747:221732190:1 gene:Zm00001d044197 transcript:Zm00001d044197_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Pentatricopeptide (PPR) repeat-containing protein-like
Sequence	MVAMEESGIPIGASTWNAVIAGCVRAENGELAIELLGKMVSVGGVVPSVATFNTVLHVIS ALRGVNVLRELHAFVLRNAEVVGLGPVDLDRLQESLAAGYMCSSCVQYAGRVFRDVRIST CFLGNLMISGFLDTGQRNQALGVLREMAFGCGHEAQHLPSASLTLVLPEVNLATKRGLEI HAYAYRHGFECDTSVCNALMAMYARGGKICRSDKVFQGLDAKDVVSWNTMISGYATVHDF DLSFELFREMQRNGTRPDDYTFTSVLNACSFACNHRTVMALHGQMIRMGLCHSYVDDMNS LMDAYGKCGFIAEAQKIFDETERKDTVSWNIIISCYGYSGFPQRAIRLFHQMQDQSYKPT RVTFIAVLAACSHAGLVDEALRYFEAMHGDYSITADEAHYACIVDCFGRAGQLQRAYEFI RGMPVVPNACVWGALLSSCRIHGNIGLAEIAAKKLVELDPQHSGYWMLLKDMYSKAKRWN DVSQLRAAMRDNGVKKCPGYSWIEGRDSEVHRFLTADKLHSQSHQIYEVLGGLTEQLMDE GYEIDVDLTYTE

Transcript Sequence

Transcript ID	Zm00001d044197_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:221729747:221732190:1 gene:Zm00001d044197 gene_biotype:protein_coding transcript_biotype:protein_coding description: protein; Pentatricopeptide (PPR) repeat-containing protein-like
Sequence	ACCCACAGCCGGCCTGCCCGGCCACCTCCGTCTGCCCACTGCCGCCTCCGCCGATGCCGC CCTCATCACCCTCTCCGCCTTCCTCTCCTCCGGCCGCCTCACGACCTCCTCCCCTTCCCT CCTCCACCGCACCCTCCGCGCCGCCGCCGACCACCGCCTCCCGCGGCTCGGCCTGCAGCT CCACGCCTTCCTCGTCAAGACCCGCTTACTTGCCGACCCCTTCTCGGCCTCCGCCCTCCT CCACCTCTACTCCACCATCGCCCCGCTGCACCGCACCCGCCTCCTCTTCGACAGGATCCC CAAGTCCACCTACCCCGTCCCCTGGAACACCATGATCCTACGGACGGATTCTTGGATGAG GCGTTCGATCTGATGGTGGCCATGGAGGAATCCGGCATCCCCATTGGTGCCTCCACCTGG AACGCCGTCATCGCTGGGTGCGTCCGAGCTGAGAACGGAGAGCTCGCCATCGAGCTGCTA GGCAAAATGGTTTCGGTTGGGGGAGTTGTGCCCAGTGTGGCCACGTTCAACACCGTGCTC CACGTGATTTCGGCGTTGCGCGGGGTGAACGTGCTCCGAGAGTTGCACGCATTTGTGCTG CGCAACGCTGAGGTTGTGGGACTTGGGCCTGTGGATTTGGATCGACTCCAGGAATCCCTG GCGGCAGGATACATGTGCAGCTCCTGTGTCCAGTACGCAGGCCGTGTGTTTCGTGATGTC AGGATAAGCACTTGCTTCCTGGGCAACCTGATGATATCGGGATTTCTTGACACGGGGCAG CGGAATCAAGCCTTGGGTGTTCTGCGAGAAATGGCGTTTGGCTGTGGTCATGAAGCTCAG CATCTGCCATCGGCTTCGCTTACGCTGGTCCTCCCTGAGGTCAATCTGGCAACAAAGAGA GGCCTAGAGATCCATGCTTATGCCTATCGCCATGGTTTTGAGTGTGACACCTCGGTCTGC AATGCCTTGATGGCAATGTATGCAAGAGGGGGCAAGATATGCCGGTCAGACAAGGTTTTC CAAGGACTGGATGCTAAAGATGTCGTGTCATGGAATACTATGATTTCAGGCTATGCCACG GTTCATGATTTTGATCTCTCATTTGAGCTGTTCCGTGAAATGCAACGTAATGGTACCAGA CCTGATGACTACACATTTACATCAGTGCTCAACGCCTGCAGCTTTGCCTGCAATCACAGG ACAGTAATGGCATTGCACGGGCAAATGATAAGGATGGGGCTTTGCCATTCCTATGTTGAT GATATGAATTCTCTCATGGATGCTTATGGAAAGTGTGGTTTCATTGCTGAAGCTCAGAAG ATATTTGATGAAACCGAGCGAAAGGATACAGTTTCGTGGAATATCATCATTTCGTGCTAC GGCTACAGCGGTTTTCCTCAACGAGCAATCAGGCTTTTCCATCAGATGCAAGATCAAAGC TACAAACCTACCAGAGTCACTTTCATTGCTGTGCTAGCGGCATGCAGCCATGCAGGCTTA GTAGACGAAGCACTGCGTTATTTCGAGGCAATGCACGGAGACTACAGCATTACCGCTGAT GAGGCTCACTATGCCTGCATCGTTGACTGTTTTGGCAGAGCAGGTCAGCTCCAACGGGCT TATGAGTTCATCAGAGGAATGCCGGTGGTTCCAAATGCTTGTGTGTGGGGTGCCCTACTT AGCAGTTGCAGGATACACGGAAATATAGGCCTAGCAGAAATTGCCGCGAAGAAGCTCGTT GAGCTGGACCCTCAGCATTCTGGATACTGGATGCTGCTAAAGGATATGTACTCAAAAGCC AAGAGATGGAATGATGTATCGCAACTTCGAGCTGCTATGAGAGATAATGGCGTTAAGAAG TGCCCAGGTTATAGTTGGATTGAGGGGCGAGATAGCGAGGTCCACAGATTCCTTACCGCT GACAAGCTTCACTCACAAAGCCACCAGATATACGAAGTACTAGGTGGGTTAACCGAGCAG TTGATGGATGAAGGATATGAAATAGATGTCGATTTGACATATACTGAGTGAGGGATGTAC TAGATTTCTACAACTTGTCTTGAAAATCTAGCCATTTAGCTGACATCCCTAGTCCCAACA CCATGTCTATTGCAAGCAGCCACGCGAATCTTATTCAATGATTACAAGGTTGCACGAGCT AAAGAGTTCAGTTTCTGCCCAGGTTAGAAGCGCTAAGAAGTAGGCGCAAGATGTTACATT TTGGGCTCGTCATCTGATGTGTAAGTTGATGCCTTGTCACGAAAAGATCAGACCCGGAGC ATTGTGTAACAAGAATATACAGAGTTCACAGCCTAGTTTCAAT