Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044186_T248
CDS Infomation

cds chromosome:B73_RefGen_v4:3:221399359:221405518:1 gene:Zm00001d044186 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGCTTCAAGCAATGGTTCAAATGGGTGTCCTTGTTCCTACTGGAGATATGACTGTT
GTCAGAAGAACCGCTCAATTTTTCCTTAATAGCTTTCAAGAGTGCCTAACAGCACAAAGG
AAGGAGAGAGAAATGGCAACCGCAGAACTGGGTTTCAAAAAGCAATTAACTAAGGAGGAG
AAGTTTGAAAAGAGGAAGCAGAGACTTGCTGCAATCGGAGAGGATCTTTTGGCGATTGCT
GCTGATCAACCATTTCGCTTCCCTGCCACATTTACATTTGTGGTCAGAGCATTCTCAGTT
CTAGATGGTACTGGGAAAGGCCTTGATCCTAGGTTTCATATTACAGAGATTGCTAAGCCA
AATGCCAAGGAATTGCTAAGATTTAATGACGCTGGTGTTGAAATAGTTGTGAAGGCAAGT
TTCAACATTTGGTCAAAGCTGTTAACCTATCTCTATGATAGCACATCTCCTAAGGGTTAG

Peptide Sequence

PEP ID

Zm00001d044186_P248
PEP Infomation

pep chromosome:B73_RefGen_v4:3:221399359:221405518:1 gene:Zm00001d044186 transcript:Zm00001d044186_T248 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVLQAMVQMGVLVPTGDMTVVRRTAQFFLNSFQECLTAQRKEREMATAELGFKKQLTKEE
KFEKRKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGTGKGLDPRFHITEIAKP
NAKELLRFNDAGVEIVVKASFNIWSKLLTYLYDSTSPKG

Transcript Sequence

Transcript ID

Zm00001d044186_T248
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:221399359:221405518:1 gene:Zm00001d044186 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGCGGACCGGACCCGAAAATTTTCTTCGAATGAGCTCTGAGCCGTGTAGCCCTCCAGTCC
GCTGTTCGGTGCCCGCTGCCCACCTCCCTCTCCTCCTTCCGACCTCGCCGCCTCCCTCCC
TAAACTCTAAACCTTCCACCAGCCGAAGCTACTGCCGCGGCCGCAGCAGAGGTCGCGACG
ACGAACGCTGAAGAAGCGCCGGCGAGGGAGAGCTCCGACGAGTCCTCTCTGTCGGCCAGG
TTGTCGGTGCCGAGCGCGCGGTCGTCGTGCAGCTCGTGGGACCAGTCCGCCGAGCGGCTG
CTAGAGGCGGACGCAGCCCTCGTGCGGAAGAAGTGCGCCGAGAAGAGCGCGCCGAGGCCG
AGGACGCCGCCGGGCAGCAGGTCCTCCAGCGCGGCGAGGTCTTGGTCTTGGTCTTGGAGC
AGGGTCTTGGTCTTGGAGCACTGCACGAGGAGCACATCGGCATGGTGCTTCAAGCAATGG
TTCAAATGGGTGTCCTTGTTCCTACTGGAGATATGACTGTTGTCAGAAGAACCGCTCAAT
TTTTCCTTAATAGCTTTCAAGAGTGCCTAACAGCACAAAGGAAGGAGAGAGAAATGGCAA
CCGCAGAACTGGGTTTCAAAAAGCAATTAACTAAGGAGGAGAAGTTTGAAAAGAGGAAGC
AGAGACTTGCTGCAATCGGAGAGGATCTTTTGGCGATTGCTGCTGATCAACCATTTCGCT
TCCCTGCCACATTTACATTTGTGGTCAGAGCATTCTCAGTTCTAGATGGTACTGGGAAAG
GCCTTGATCCTAGGTTTCATATTACAGAGATTGCTAAGCCAAATGCCAAGGAATTGCTAA
GATTTAATGACGCTGGTGTTGAAATAGTTGTGAAGGCAAGTTTCAACATTTGGTCAAAGC
TGTTAACCTATCTCTATGATAGCACATCTCCTAAGGGTTAGGGCTTGTTTGGCTAGGAGC
GGATTGAAGGGGATTGGAGGAGCCTATTAAGCATTGAACAATTTACCCATGCTTGTTTCC
TATTCTTTGGTCGTGATAACGTTTGCAACCATGAATAGTACATATTGCTTTTCCAGGTGT
GTGGAGAGACATGTGTATTCCTCCTATGACGAATTCCTTAGGCTCCATGAAGGTAAGCCT
GTCTTAATGGGCTTGATTGTTGAACCTGACTTAGTACTTTTATCCATGTCACGGCATTGA
ACTAGACAGTCACTCATGTCCTTAGGATATTAACGGTATACATCAACAATTCATTCTATT
TTAATTGCTTGCAAAACTTTTTTGGCCCTTCAAATGAGTTCCACGCATCAAGAAGTCAAG
ATTCCAGGAGGCCTAAAATAGGTAAACTTGCTGTTATATCTTTTGTGCTCTCAGTAGTCG
CCTATTACTTGTTTTAATTCGCTGATCCATGTGCAGTGTATCAATTTGTCTTAGTATTTT
TATTCGTGGGGATGCCTGACTCAAATGAACTCATGTTCAACACTGAGCAACCTACTTATA
ATTTTGGAGCCTATAAAATTTCTAAGCTAAAAAAGGTAATAAAAAGGAATGATATTATAG
TCACATCATCTGAACAACAGTGAAGGGAAGGGAGGGATAGATGGTCTGAATGCCTATAAA
TGTCGTTCCCTTGGTCTGCTTCTTAAATTTGAAACCAAGATACTATAGTCAAATACTTCT
AAACTTGAAGCCTGTAAATTGGAATCACCAAGTTAAATAAGAACAGGGGTAACTATTCAT
AGCTCAGATGGTTGTCATCCAATACGTGCGCTAAGGCACAGACAGGTGAGGTTGCATATT
CAATCCCCAAGACAGTAAACCATTGAGGCATATTAAAACACATTTTCCATGAGGTTTCCT
AAGTGATCCTTTAGGTAAACAGAACCATACCTAGCTCCATATGAAACTATTTCCCGATTT
GAAGTACACCTAAGTTAAGGTTCATACATTGGAGCTCTGGCAGTAAAACAATAGTCCTTA
CCTTGAGACAGCTTAGATTAGAATGAGGTGGATGGTAATATGGCATGAGCAACATACCAC
AGTTCATGCATGGAGGAAATCATTTTTACTTTCTTTCCTAGCCATGGTAGTTGTGTTGCT
CCTTACCAAGGCACTACATGGAGCATCATATGGTTCATGATGTAAACATGGTTTTAGATC
TGTCTATACTCACACTCAAGAACCAGCCAAAATGTGATATTCCACAACCTGAGAGAAATC
AAAATGAAATCATGTACAACATAGTACATATGATGATGTGCGGTGATGCGGGTGCATGTG
TGTTGTGTGTGTAGGAGAGGAGGGCGCAGCTTGATTCAATCCATGTCAAGTCAGAGGCTG
CTGCGAGGTTTGCACATGCAAGTAGAATTTAGATGAAAAGACGTGAAATGGTATTTTCCA
GTATGGACTGTATAAATGTAATTATATTCCTATGCTGGTCCTGCTTCGCTTTCATGTGGA
TTTATCTTGCAAATGGTATGTGGATCCGTTCCAGAGGCAATGAGCCTTGCAGCCAGTTTG
CAGTATAAAAAACCCAATTATGTCCACTGTTGGTTCGACGCAGCGTGTGCCGAGGATTTC
TACTGCCAAGCATAAGAAAGTATTTGAAATCAAGAACTTGCATTCATTCAATCATAATGT
GTTTCCTATCAAGCATAAGTGTGTGTGTTTTGTTTGATATCTGCTTTAATAGGAGATTGT
TCTTGTCACCCCAAAAATGTTCCCATTCTACTTTCGGGCAGGTGAATTGCAGATAAATGG
TCTGTTCGCAACTGGTGCTCTCGGGCGACTCCATCACTGAGCAACCCTTCGCCCCGGTGG
CTGCGGTGTCGCACTGGCTGACACCTGCTCGCAGTTGCATTACAAGTTTTACTGACTATG
TATTTTCAGGTTTATTCAATTTCAGTTGTAATGCTTCTGACAGCAGTTGTATCAGTCCTC
TTGTTCAGCTTCCATGTATCCCTCGCATCCTTCCTTGGATCCACATAAGTGTTAATGATA
ATTTTGTTGCATCTCCTCTGCTGATCAGAGCTTTCAAACTCATGACAGAATAATGTACTA
AACTTCAGTTTGGTGTCTATCTCAGTGTACCTACACTCAGTTGGAAAACTTCAACCACAC
TGCAACAAGGTTTATAAAAGGTTTGCTATGAGGAAAAACAAATTTATGGGCTCAAACAAA
GTGTGATAGTGAAAGTCATTTTGCTTCCAGCTTAAGAACCAAGCCAAGAAAACAGATATC
AACTGTGACGCCACACTCAAAAGCTTGTTTGGTGAGAGGGATAAGGTTGGGATGCTGGAG
ATCTCTAAGCTTTTGAGCCGTGGCTTCCCGAAAATCTCCAAGCTTTTGTGGTCCATGGAG
CCAGGGATGGCTCTTTGGTAAAAGACTTCGTTGTGGATGGCCTCTTTTATGGTCCATGTT
AAGTCCCAAGTCCCACTAGGTGGTTAAGCAGAAAAATCTTGTGATGGCATTAAGACTTTC
AGACTTTGTTTTTGGGTCTGATGCATGTAAAAAGGATTCCCAGTGTTTCTGTTGCTCTTG
CGATCCTGTGAGGACACATATGAGAGAAATATTTAGTTTGTTGATGGC