Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044176_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:221180362:221181917:-1 gene:Zm00001d044176 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAGATCCTACGCCTCCTCGCGGCGCGGCGCTTCCGCCGGCGGCGGCGCGGGGTGTCC
ACGATCACCTCGACGGCGACTGCGCCGGCCACCCCTCGCAGCGGCTGCGTCGCCGGCGTG
TACGGATACGGCGAGGAGGAGGAGGACGAGGGCCCGTTCTTCGACCTCGACCTGACCTGC
TGCTCCGCGCCCGCGTCCAGCGCGGGCAGCCAGGCGGCCGAGTCGGGCTCCGAGTCCGAG
GACGCCTCGTCCTGCGCCACCGCCACCGCCGCCGCCACCGAGCGCGGCGACCTCGACTTT
GTCGTCTCGCTGCAGCGGAGCCGTATCTACGATGAGCCGCCGCCGCCGCCGCCGCCGCTC
ATGTTCTGCGCGTCCGAGCCGAGCCCGAGCGACGGCCGCCGCAGCAGCGCCAGCGCCAGC
CGCCTCGGGAGCAGGCTGCAGCTGCGGACGCTCAGCTTCGGGTCCGCCAAGGCCGCCCTC
TACGGCGGGCGCGCCAGCTTCTCCCGGAGCACCGGCAGCGCGCGCTCGGCCAGGCTCTTC
GCCGCGTACGGGTACGGGTACGGCTCGCCCGACCAGGACCCGCGGGACGAGGGGAAGGCC
AGGCCGCCCTCCGGCGACGTCATCCGCCGGTACCTGAGCAAGATCTCCAGCCGGCTGCAG
CGCCGGCGCGGCGCGGCCACTGACCTCCGGCTACGGAAGAGCCGCTCGGCCTCCGCCTCC
GCCGCAGCGGCGGCCCGGCGCGACGACTCGCTCGTCGAGAAGCAAGACGGCATCGCCAGC
GCCATCGCGCACTGCAAGGAGTCCCTCCACCGAGCGTCCGTCTCGGAGGCCGACACGTCG
CTGGCGCGATCGCGGAGTGACCCAGGGCCGTAA

Peptide Sequence

PEP ID

Zm00001d044176_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:221180362:221181917:-1 gene:Zm00001d044176 transcript:Zm00001d044176_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQILRLLAARRFRRRRRGVSTITSTATAPATPRSGCVAGVYGYGEEEEDEGPFFDLDLTC
CSAPASSAGSQAAESGSESEDASSCATATAAATERGDLDFVVSLQRSRIYDEPPPPPPPL
MFCASEPSPSDGRRSSASASRLGSRLQLRTLSFGSAKAALYGGRASFSRSTGSARSARLF
AAYGYGYGSPDQDPRDEGKARPPSGDVIRRYLSKISSRLQRRRGAATDLRLRKSRSASAS
AAAAARRDDSLVEKQDGIASAIAHCKESLHRASVSEADTSLARSRSDPGP

Transcript Sequence

Transcript ID

Zm00001d044176_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:221180362:221181917:-1 gene:Zm00001d044176 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGATTCACCACCCCAAACGCAGCCAAAGCCCCAAAGCGGGCTCGCGCGGCCGTGCCTCCC
ACTCCCACCCACGGACCCACCGCCCACGCACGCACGGGCGTGCGGCCATGCAGATCCTAC
GCCTCCTCGCGGCGCGGCGCTTCCGCCGGCGGCGGCGCGGGGTGTCCACGATCACCTCGA
CGGCGACTGCGCCGGCCACCCCTCGCAGCGGCTGCGTCGCCGGCGTGTACGGATACGGCG
AGGAGGAGGAGGACGAGGGCCCGTTCTTCGACCTCGACCTGACCTGCTGCTCCGCGCCCG
CGTCCAGCGCGGGCAGCCAGGCGGCCGAGTCGGGCTCCGAGTCCGAGGACGCCTCGTCCT
GCGCCACCGCCACCGCCGCCGCCACCGAGCGCGGCGACCTCGACTTTGTCGTCTCGCTGC
AGCGGAGCCGTATCTACGATGAGCCGCCGCCGCCGCCGCCGCCGCTCATGTTCTGCGCGT
CCGAGCCGAGCCCGAGCGACGGCCGCCGCAGCAGCGCCAGCGCCAGCCGCCTCGGGAGCA
GGCTGCAGCTGCGGACGCTCAGCTTCGGGTCCGCCAAGGCCGCCCTCTACGGCGGGCGCG
CCAGCTTCTCCCGGAGCACCGGCAGCGCGCGCTCGGCCAGGCTCTTCGCCGCGTACGGGT
ACGGGTACGGCTCGCCCGACCAGGACCCGCGGGACGAGGGGAAGGCCAGGCCGCCCTCCG
GCGACGTCATCCGCCGGTACCTGAGCAAGATCTCCAGCCGGCTGCAGCGCCGGCGCGGCG
CGGCCACTGACCTCCGGCTACGGAAGAGCCGCTCGGCCTCCGCCTCCGCCGCAGCGGCGG
CCCGGCGCGACGACTCGCTCGTCGAGAAGCAAGACGGCATCGCCAGCGCCATCGCGCACT
GCAAGGAGTCCCTCCACCGAGCGTCCGTCTCGGAGGCCGACACGTCGCTGGCGCGATCGC
GGAGTGACCCAGGGCCGTAAGCAGCGTCGACGCCGGGTTGCGCCATCTGCCACGCTCGCC
ATTCCACGCTCCGGAGACTCCTGCGGCGGCGGCGGCGGCCGAAGCTTCTCGCTGAATTTC
GACAAGGACGCGAGGAAAAGACGAGGAACTTGCCGGCGCGACTGCCCGAGTACGAACTGA
TAAAGGATGGCTTGCCAAGAACATGCAGCGGTCGGTTGAATGAGGGCGGGGAGTGTCTTT
AGGATTGTTTATGTGTGTGTGAGAAGGACTTCTTTTTCGTGGGTTTAGGCGTGGGGAAAG
AGAGCTCCTTTTATTAGGCTCCTTTAACCACCTTTTTTTTGGGGGTTCAGTTTTTTTTCT
ATCTTTTCAGTTCGACGCTTTTTGTACAAGAGGCTTGCAACAGGACCTGTAATTAGTAGT
AGCTGTTAGGTAGGTGGTCAGCCTCATGCAAATCTTTCAACATGTTCGTTCGTTGTCTCA
ACA