Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044175_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:3:221170158:221175604:1 gene:Zm00001d044175 gene_biotype:protein_coding transcript_biotype:protein_coding description:Neutral/alkaline non-lysosomal ceramidase
Sequence

ATGGAGGCATCATCTTCCTTGCGCTTCCAAGTTTCTCGTTTTAGTTCGTTCAAGATATGG
CTATGCCTTTTTCTGGTACTCGTTCTTCAGAACTGCAGCCCAGCACTTTCAGATTCACCA
TATTTGGTCGGTATGGGGAGCTATGACATAACAGGGCCAGCAGCAGACGTTAACATGATG
GGATATGCAAATGCTGAGCAGATTGCATCAGGAATTCACTTTAGGCTAAAGGCTCGTGCC
TTTATCGTTGCTGAGCCTAACGGCAAGCGTGTCGTGTTTGTAAATCTTGATGCTTGCATG
GCATCACAGCTTGTTACTATAAAGGTGCTTGAAAGACTTAAAGCAAGGTATGGAGATCTT
TATAATGAGAATAATGTGGCTATCAGTGGAATCCATACGCATGCTGGTCCTGGTGGTTAT
CTGCAGTATGTAGTTTATATTGTTACATCACTTGGGTTTGTTCGCCAATCATTTGATGTG
ATTGTCAATGGAATTGAGCAATGCATTGTTGAAGCTCACAACAATCTCCACCCTGGGAAA
ATCTATGTGAACAAAGGTGACCTCCTTGATGCCAGTGTGAATCGCAGCCCAAGTGCATAT
CTAAATAACCCCGCTGAAGAGAGAGGCAAGTATAAGTACAATGTTGATAAAGAAATGACC
CTCATCAAGTTTGTAGATGATGAGTCTGGTCCGATTGGGAGTTTCAATTGGTTTGCAACT
CATGGAACATCTATGAGTCGTACAAATTCTTTGATAAGTGGTGATAACAAAGGAGCAGCC
GCACGTTTCATGGAAGATTGGGCAGAACAAAATGGCATTCCAAAACAGGCAGCTCATGTA
AATCACGATGGTTTGGAATCTTCACACATGACCTCTCGACTTCCGAGAAGAGTCTCCCCA
ATAATTCCTGAACCAAATGAGATAACTGATGACTTAGTACAATTGGCGTCATCCTACGAA
GCCTCAGGTGGACGGCGATTATCAAGTTCAAGTATCACCAAGCGTATCAGAAGTACCCAA
CAAAACAGACCTAAATTTGTTTCTGCATTCTGCCAGTCAAATTGTGGTGATGTTAGTCCA
AATGTCCTGGGAACTTTCTGTATAGACACTGGCCTTCCTTGTGACTTCAATCACAGCACA
TGCAATGGGAAGAATGAATTATGCTATGGACGAGGGCCAGGATATCCTGATGAATTTGAA
AGTACCCATATCATTGGCAATAGGCAATTTCAAAAGGCTGTAGATCTTTTTAGTTCAGCT
TCTGAAGAAATACAAGGCAAAATTGACTACAGGCATACTTACCTAGATTTCTCAAAACTT
GAAGTGAATGTCCGTACAAGTACAGGAAGTCAGCAAGTTGTGAAAACATGCCCAGCAGCC
ATGGGGTTTGCCTTTGCTGCTGGAACCACAGATGGTCCTGGAGCTTTTGACTTTAAACAA
GGAGATGTCAAGGGAAACCCTTTCTGGAGATTAGTAAGAAACTTACTTAAGACACCAGGG
AAGGAGCAAGTCGAATGTCAAGCACCAAAACCTATCTTGCTAGACACTGGTGAAATGAAG
GAACCATATGATTGGGCGCCTGCAATTCTTCCAATTCAGATCATAAGAATCGGCCAGCTG
GCTATCTTGTGTGTCCCTGGAGAATTCACAACAATGGCTGGCAGGAGGCTACGTGATGCC
GTCAAAGCTGTACTTACAAGTGACAACAGTGGTGAATTTAATAACATTCATGTTGTTCTT
GCGGGGCTAACAAATACATATTCGCAGTATATTACAACTTTTGAAGAATATGAGATCCAA
AGATACGAGGGAGCATCGACGTTGTATGGCCCCCACACGTTGAGCGCCTACATTCAGGAG
TTCCAGAAACTTGCTACAGCCATGGTGGCAAACAAAGAGGTCCCGACAAATTTTCAGCCC
CCAGACATGTTGGACAAGCAAATAGGACTCCTCCCAGGCGTTGTGTTCGACTCCACACCT
CCTGGGGTGGAGTTCGGAGATGTCAGCTCAGACGTCCCCGCAAGCTCAACTTTCAGGAAG
GGCAGTGTCGTGAACGCTACATTCTACTCGGCGTGCCCGAGGAATGACCTTCTCACGGAC
GGCACGTTCGCGCTCGTTGAGAAGCTGGACGGCAGCAACAGCTGGGTTCCTGCCTACGAC
GACGACGACTGGTCACTACGCTTCAAGTGGTCGAGACCGTCGAAGCTGAGCCCGAGAAGC
TTTGCGACGCTGGAATGGACCGTTCCTGGAGACGCCCCGTCGGGCGTTTATAGGTTGAGG
CATTTTGGTGCCTCCAAACCACTGATTGGGTCCATCAAACATTTTACAGGGACCTCTCGG
GCGTTCGCAGTGCGTTAG

Peptide Sequence

PEP ID

Zm00001d044175_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:3:221170158:221175604:1 gene:Zm00001d044175 transcript:Zm00001d044175_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Neutral/alkaline non-lysosomal ceramidase
Sequence

MEASSSLRFQVSRFSSFKIWLCLFLVLVLQNCSPALSDSPYLVGMGSYDITGPAADVNMM
GYANAEQIASGIHFRLKARAFIVAEPNGKRVVFVNLDACMASQLVTIKVLERLKARYGDL
YNENNVAISGIHTHAGPGGYLQYVVYIVTSLGFVRQSFDVIVNGIEQCIVEAHNNLHPGK
IYVNKGDLLDASVNRSPSAYLNNPAEERGKYKYNVDKEMTLIKFVDDESGPIGSFNWFAT
HGTSMSRTNSLISGDNKGAAARFMEDWAEQNGIPKQAAHVNHDGLESSHMTSRLPRRVSP
IIPEPNEITDDLVQLASSYEASGGRRLSSSSITKRIRSTQQNRPKFVSAFCQSNCGDVSP
NVLGTFCIDTGLPCDFNHSTCNGKNELCYGRGPGYPDEFESTHIIGNRQFQKAVDLFSSA
SEEIQGKIDYRHTYLDFSKLEVNVRTSTGSQQVVKTCPAAMGFAFAAGTTDGPGAFDFKQ
GDVKGNPFWRLVRNLLKTPGKEQVECQAPKPILLDTGEMKEPYDWAPAILPIQIIRIGQL
AILCVPGEFTTMAGRRLRDAVKAVLTSDNSGEFNNIHVVLAGLTNTYSQYITTFEEYEIQ
RYEGASTLYGPHTLSAYIQEFQKLATAMVANKEVPTNFQPPDMLDKQIGLLPGVVFDSTP
PGVEFGDVSSDVPASSTFRKGSVVNATFYSACPRNDLLTDGTFALVEKLDGSNSWVPAYD
DDDWSLRFKWSRPSKLSPRSFATLEWTVPGDAPSGVYRLRHFGASKPLIGSIKHFTGTSR
AFAVR

Transcript Sequence

Transcript ID

Zm00001d044175_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:221170158:221175604:1 gene:Zm00001d044175 gene_biotype:protein_coding transcript_biotype:protein_coding description:Neutral/alkaline non-lysosomal ceramidase
Sequence

GGAGTGACCAGACTGGCCATGTTTCTTTGCTGTGGTGTTGCTTGTGGGATTTGGTGTAGC
GTCGGTTGCTTGTTGCCCGATTAGACTTGTGATGCCGATCTCCCGTGGGTGCGTGATAGT
ATACGCCAAGAATCTGAAGTCAGGGCAGATTCGAGTGTGCCCGCCTGTGCGGCGTGTGCT
TCCAAGGATATCACTTGTGCCCCTTGCCTCCCAGGCTCTCAATTCCCACCCTCTAAATCT
GTCCACTCCCACCGCCACTCCCCCTCTGCCGCTGCCGGAAATTCATGTTAACTATTTTTT
TTGGTGCGTCTACATCAGAATCTCATAAGCCTGCAGTCAATTTGTCAGTTTATTGAGACA
TCCAACTTGCATGAGTTGATCAACAAGCCCATCCCTGGTTCCTTATGGAGGCATCATCTT
CCTTGCGCTTCCAAGTTTCTCGTTTTAGTTCGTTCAAGATATGGCTATGCCTTTTTCTGG
TACTCGTTCTTCAGAACTGCAGCCCAGCACTTTCAGATTCACCATATTTGGTCGGTATGG
GGAGCTATGACATAACAGGGCCAGCAGCAGACGTTAACATGATGGGATATGCAAATGCTG
AGCAGATTGCATCAGGAATTCACTTTAGGCTAAAGGCTCGTGCCTTTATCGTTGCTGAGC
CTAACGGCAAGCGTGTCGTGTTTGTAAATCTTGATGCTTGCATGGCATCACAGCTTGTTA
CTATAAAGGTGCTTGAAAGACTTAAAGCAAGGTATGGAGATCTTTATAATGAGAATAATG
TGGCTATCAGTGGAATCCATACGCATGCTGGTCCTGGTGGTTATCTGCAGTATGTAGTTT
ATATTGTTACATCACTTGGGTTTGTTCGCCAATCATTTGATGTGATTGTCAATGGAATTG
AGCAATGCATTGTTGAAGCTCACAACAATCTCCACCCTGGGAAAATCTATGTGAACAAAG
GTGACCTCCTTGATGCCAGTGTGAATCGCAGCCCAAGTGCATATCTAAATAACCCCGCTG
AAGAGAGAGGCAAGTATAAGTACAATGTTGATAAAGAAATGACCCTCATCAAGTTTGTAG
ATGATGAGTCTGGTCCGATTGGGAGTTTCAATTGGTTTGCAACTCATGGAACATCTATGA
GTCGTACAAATTCTTTGATAAGTGGTGATAACAAAGGAGCAGCCGCACGTTTCATGGAAG
ATTGGGCAGAACAAAATGGCATTCCAAAACAGGCAGCTCATGTAAATCACGATGGTTTGG
AATCTTCACACATGACCTCTCGACTTCCGAGAAGAGTCTCCCCAATAATTCCTGAACCAA
ATGAGATAACTGATGACTTAGTACAATTGGCGTCATCCTACGAAGCCTCAGGTGGACGGC
GATTATCAAGTTCAAGTATCACCAAGCGTATCAGAAGTACCCAACAAAACAGACCTAAAT
TTGTTTCTGCATTCTGCCAGTCAAATTGTGGTGATGTTAGTCCAAATGTCCTGGGAACTT
TCTGTATAGACACTGGCCTTCCTTGTGACTTCAATCACAGCACATGCAATGGGAAGAATG
AATTATGCTATGGACGAGGGCCAGGATATCCTGATGAATTTGAAAGTACCCATATCATTG
GCAATAGGCAATTTCAAAAGGCTGTAGATCTTTTTAGTTCAGCTTCTGAAGAAATACAAG
GCAAAATTGACTACAGGCATACTTACCTAGATTTCTCAAAACTTGAAGTGAATGTCCGTA
CAAGTACAGGAAGTCAGCAAGTTGTGAAAACATGCCCAGCAGCCATGGGGTTTGCCTTTG
CTGCTGGAACCACAGATGGTCCTGGAGCTTTTGACTTTAAACAAGGAGATGTCAAGGGAA
ACCCTTTCTGGAGATTAGTAAGAAACTTACTTAAGACACCAGGGAAGGAGCAAGTCGAAT
GTCAAGCACCAAAACCTATCTTGCTAGACACTGGTGAAATGAAGGAACCATATGATTGGG
CGCCTGCAATTCTTCCAATTCAGATCATAAGAATCGGCCAGCTGGCTATCTTGTGTGTCC
CTGGAGAATTCACAACAATGGCTGGCAGGAGGCTACGTGATGCCGTCAAAGCTGTACTTA
CAAGTGACAACAGTGGTGAATTTAATAACATTCATGTTGTTCTTGCGGGGCTAACAAATA
CATATTCGCAGTATATTACAACTTTTGAAGAATATGAGATCCAAAGATACGAGGGAGCAT
CGACGTTGTATGGCCCCCACACGTTGAGCGCCTACATTCAGGAGTTCCAGAAACTTGCTA
CAGCCATGGTGGCAAACAAAGAGGTCCCGACAAATTTTCAGCCCCCAGACATGTTGGACA
AGCAAATAGGACTCCTCCCAGGCGTTGTGTTCGACTCCACACCTCCTGGGGTGGAGTTCG
GAGATGTCAGCTCAGACGTCCCCGCAAGCTCAACTTTCAGGAAGGGCAGTGTCGTGAACG
CTACATTCTACTCGGCGTGCCCGAGGAATGACCTTCTCACGGACGGCACGTTCGCGCTCG
TTGAGAAGCTGGACGGCAGCAACAGCTGGGTTCCTGCCTACGACGACGACGACTGGTCAC
TACGCTTCAAGTGGTCGAGACCGTCGAAGCTGAGCCCGAGAAGCTTTGCGACGCTGGAAT
GGACCGTTCCTGGAGACGCCCCGTCGGGCGTTTATAGGTTGAGGCATTTTGGTGCCTCCA
AACCACTGATTGGGTCCATCAAACATTTTACAGGGACCTCTCGGGCGTTCGCAGTGCGTT
AGGTTGCACACCGTTGCGTTGCGTTCGACGGCACACCTGTCAGAGAATCGACACCGGGTC
ATATATTTACTTTGCATACCTGCCACAGTATATGGACATGTTTTCCCTATAGTTTTTACA
TGCTCCTGATATTAATAACGCTGTCCATCGCCCGTTCTGTTTGGTCATGACAAATACCCA
AATCGCCATATAGCTACAGACTCGATGTGTGTGAAATTTCTATATATTAAAGCAGGAAAG
AAATCTGTTCTCAGATTCAGCCACGTCAGCATTTGGCTTTACAGCT