Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044164_T020
CDS Infomation	cds chromosome:B73_RefGen_v4:3:220843323:220855447:-1 gene:Zm00001d044164 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-adaptin-like protein A
Sequence	ATGAATTTGCTGGAGGATAGACTTCAGCATGCAAATGGAGCAGTTGTTTTGGCAACAATT AAAGTTTTTCTCCATTTGACAATGTCTATGACTGATGTTCATCAACAGGTTTATGAACGT ATTAAAGCACCCTTGCTTACTCTGGTGGGTGCTGGCAGTCCTGAACAGTCATACTCTGTG CTATGCCATCTACATCTTCTGGTGATGCGTGCTCCAATGTTATTTTCCTCAGACTATAAA AGCTTCTACTGCCAATTTAGTGATCCTTCATACGTGAAGAAGTTGAAACTTGAGATGTTG ACTGCTATAGCAAATGAAAGCAACACATATGAGATTGTCACCGAACTGTGTGAATACGCT GGGAATGTTGATGTACCGATTGCAAGGGAGTCTATCCGCGCAGTTGGAAAAATAGCACTG CAGCAGTATGATGTTAATGCTATTGTGGACAGGCTTCTACAATTTCTTGAAATGGATAAG GATTATGTGACTGCTGAAACTCTAGTCTTGGTAAAAGATCTTCTCAGAAAATATCCTCAA TGGAGCCATGATTGTATAGCTGTTGTTGGAAATATCAGCAGCAAAAACATCCAGGAGCCC AAAGGAAAAGCAGCTCTCATATGGATGTTGGGAGAATATTCACAAGACATGCATGATGCT CCATACATCCTTGAAAATCTTGTTGAAAACTGGGATGAAGAGCACTCTCCTGAGGTTCGC TTGCATCTCCTGACAGCAGTGATGAAATGTTTCTTTAAAAGACCTCCAGAGACACAAAAG GCATTAGGAGCTACATTATCAGCTGGTCTATCTGACACCCAGCAGGATGTTCATGACAGA GCACTTTTCTACTACAGGCTTTTGCAATACAATCCTAATGTAGCAGAACGTGTAGTAAAC CCTCCCAAACAAGCTGTCTCTGTATTTGCAGATACACAGAGCAGTGAAACCAAAGATCGG ATATTTGATGAGTTCAACAGTCTATCAGTTGTATATCAGAAGCCATCTTACATGTTTACA GATAGGGAGCATCGTGAGCCATTTGAATACTCAGAGGATCTTACAAGCTTGACTGTTGGG GCAGAGGATCCAGAAAATGTAATTTCTGCCCAAAGATATCAAGAAAACGATAATGATCTT TTGCTAAGTACTTCAGATAAAGAGGACAATGGTACAAGAGCCAGCAATGGTTCTTCTACC TCTGCATACAATGCTCCTTCTGATTTGATTAGCCCTTCATTGATAAGCTCCCAAACACCA GCTGAAACTTCACTAGTAAATACTGGTGGGCCGACACATTCCTCACAATCAAACTTCAGT CTCGATGACCTTCTTGGCATTGGCGTTACTGAAGCTCCTGCTCCAACACCACCAGCACTG ACCCTTAACTCGAAGCCTGTGCTAGATCCTGGTACGTTCCAGAGGAAATGGGGCCAGCTA GCATTGGCGCTGTCTCAGGAATGCTCTTTGAGTCCACAAGGAGCAGCTTCATTGATGAAT CCCCAATCACTCATCCGTCATATGCAAAGCAATTACATCCAATGTATTGCTTCAGGTGGT CAGCCTCCGAACTACAAGTTCTTTTTCTATGCTCAGAAAGATGGGGCTACTGCTTTCTTC CTTGTTGAATGTATTGTCAACACAGCATCAGCGAAGGCACAGCTCAAAATTAAGGCTGAT GATGGGACTGCTGCTGAGGCATTCTCGACTTTGTTTCAGTCAGCCTTGTCCAAATTTGGG CTTTCTTGA

Peptide Sequence

PEP ID	Zm00001d044164_P020
PEP Infomation	pep chromosome:B73_RefGen_v4:3:220843323:220855447:-1 gene:Zm00001d044164 transcript:Zm00001d044164_T020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-adaptin-like protein A
Sequence	MNLLEDRLQHANGAVVLATIKVFLHLTMSMTDVHQQVYERIKAPLLTLVGAGSPEQSYSV LCHLHLLVMRAPMLFSSDYKSFYCQFSDPSYVKKLKLEMLTAIANESNTYEIVTELCEYA GNVDVPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMDKDYVTAETLVLVKDLLRKYPQ WSHDCIAVVGNISSKNIQEPKGKAALIWMLGEYSQDMHDAPYILENLVENWDEEHSPEVR LHLLTAVMKCFFKRPPETQKALGATLSAGLSDTQQDVHDRALFYYRLLQYNPNVAERVVN PPKQAVSVFADTQSSETKDRIFDEFNSLSVVYQKPSYMFTDREHREPFEYSEDLTSLTVG AEDPENVISAQRYQENDNDLLLSTSDKEDNGTRASNGSSTSAYNAPSDLISPSLISSQTP AETSLVNTGGPTHSSQSNFSLDDLLGIGVTEAPAPTPPALTLNSKPVLDPGTFQRKWGQL ALALSQECSLSPQGAASLMNPQSLIRHMQSNYIQCIASGGQPPNYKFFFYAQKDGATAFF LVECIVNTASAKAQLKIKADDGTAAEAFSTLFQSALSKFGLS

Transcript Sequence

Transcript ID	Zm00001d044164_T020
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:220843323:220855447:-1 gene:Zm00001d044164 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-adaptin-like protein A
Sequence	CAGACACCACGGCTCGTCACAGTCGTCTTCCTCCTCAGGCGAGGCCAGATCCAACCTGCC GCGGCCGACCACTGCCATGGCTCCCACCGTCCCTTCGGCGGCGAAGTCCGCTTCTCCTTC CCAACCCTCCGGGAAGAGCGAGGTGACGGATCTGAAGCAGCAGCTGCGGCAGCTTGCCGG GAGCCGCGCTCCCGATGCGGACGCCCAGCGTCGTGATGTATTCAAGAGGGTGATCTCCTG CATGACGGCCGGCATCGACGTGTCGGCCGCGTTCGGGGAGATGGTCCTCTGCTCCGCCAC CTCCGACGTCGTAACCAAGAAGATGTGCTATCTCTATGTAGGCGCCCACGCGCGCGCGCA CCCGGACCTAGCCCTCCTCACCATTAACTTCCTCCAGCGGGACTGCCAAGATCAGGACCC CACCATCCGCGGCCTCGCTCTCCGCAGTCTCTGCTCCCTCCGTGTCCCCAATCTTGTCGA GTATCTCGTCACGCCACTCACGACCGGGCTGAAGGACCCCAGCGCCTACGTGCGGATGAT TGCTGCTGTTGGTGCTGCCAAGTTGTATCACATATCTGCCACCGCCTGCATTGATGCTGA CCTTCCTGCTTCGCTCAAGGCGCTCATGCTATCCGATCCAGACGCACAGACTTGCAGGTA GTTGCCAATTGCCTGCATGCATTGCAAGAGATCTGGGCCCTAGAAGCTGCTAAATCAGAA GCAGCTGCAAGAGAGATTGAGACATTGCATAGCAAACCAGTGGTATTTTACCTGTTAAAC AAGATCAAGGAGTTCAGTGAATGGGCGCAGTGCATTGTTCTTGAGTTGGCATCAAAGTTC CTTCCATCTGATAATAATGAAATATTTGACATTATGAATTTGCTGGAGGATAGACTTCAG CATGCAAATGGAGCAGTTGTTTTGGCAACAATTAAAGTTTTTCTCCATTTGACAATGTCT ATGACTGATGTTCATCAACAGGTTTATGAACGTATTAAAGCACCCTTGCTTACTCTGGTG GGTGCTGGCAGTCCTGAACAGTCATACTCTGTGCTATGCCATCTACATCTTCTGGTGATG CGTGCTCCAATGTTATTTTCCTCAGACTATAAAAGCTTCTACTGCCAATTTAGTGATCCT TCATACGTGAAGAAGTTGAAACTTGAGATGTTGACTGCTATAGCAAATGAAAGCAACACA TATGAGATTGTCACCGAACTGTGTGAATACGCTGGGAATGTTGATGTACCGATTGCAAGG GAGTCTATCCGCGCAGTTGGAAAAATAGCACTGCAGCAGTATGATGTTAATGCTATTGTG GACAGGCTTCTACAATTTCTTGAAATGGATAAGGATTATGTGACTGCTGAAACTCTAGTC TTGGTAAAAGATCTTCTCAGAAAATATCCTCAATGGAGCCATGATTGTATAGCTGTTGTT GGAAATATCAGCAGCAAAAACATCCAGGAGCCCAAAGGAAAAGCAGCTCTCATATGGATG TTGGGAGAATATTCACAAGACATGCATGATGCTCCATACATCCTTGAAAATCTTGTTGAA AACTGGGATGAAGAGCACTCTCCTGAGGTTCGCTTGCATCTCCTGACAGCAGTGATGAAA TGTTTCTTTAAAAGACCTCCAGAGACACAAAAGGCATTAGGAGCTACATTATCAGCTGGT CTATCTGACACCCAGCAGGATGTTCATGACAGAGCACTTTTCTACTACAGGCTTTTGCAA TACAATCCTAATGTAGCAGAACGTGTAGTAAACCCTCCCAAACAAGCTGTCTCTGTATTT GCAGATACACAGAGCAGTGAAACCAAAGATCGGATATTTGATGAGTTCAACAGTCTATCA GTTGTATATCAGAAGCCATCTTACATGTTTACAGATAGGGAGCATCGTGAGCCATTTGAA TACTCAGAGGATCTTACAAGCTTGACTGTTGGGGCAGAGGATCCAGAAAATGTAATTTCT GCCCAAAGATATCAAGAAAACGATAATGATCTTTTGCTAAGTACTTCAGATAAAGAGGAC AATGGTACAAGAGCCAGCAATGGTTCTTCTACCTCTGCATACAATGCTCCTTCTGATTTG ATTAGCCCTTCATTGATAAGCTCCCAAACACCAGCTGAAACTTCACTAGTAAATACTGGT GGGCCGACACATTCCTCACAATCAAACTTCAGTCTCGATGACCTTCTTGGCATTGGCGTT ACTGAAGCTCCTGCTCCAACACCACCAGCACTGACCCTTAACTCGAAGCCTGTGCTAGAT CCTGGTACGTTCCAGAGGAAATGGGGCCAGCTAGCATTGGCGCTGTCTCAGGAATGCTCT TTGAGTCCACAAGGAGCAGCTTCATTGATGAATCCCCAATCACTCATCCGTCATATGCAA AGCAATTACATCCAATGTATTGCTTCAGGTGGTCAGCCTCCGAACTACAAGTTCTTTTTC TATGCTCAGAAAGATGGGGCTACTGCTTTCTTCCTTGTTGAATGTATTGTCAACACAGCA TCAGCGAAGGCACAGCTCAAAATTAAGGCTGATGATGGGACTGCTGCTGAGGCATTCTCG ACTTTGTTTCAGTCAGCCTTGTCCAAATTTGGGCTTTCTTGATCCTGAGTATTTTGTCTG AGCGATTCACTGGTCCACAATTTTTTTCCGGCGTTCACAGTTTTGCCCCCACTCTGCCGC GGTGCCGCCTAAGCTTGTCCAGTACTTGATCAATTTGTTGGAGAATCAGCGTAGAAGGTG CAAGAGAGCAATGGAGTTTTGCGGAGTAAAATCTTATTTGT