Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044144_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:3:220423625:220429269:-1 gene:Zm00001d044144 gene_biotype:protein_coding transcript_biotype:protein_coding description:CTD-phosphatase-like protein
Sequence	ATGGAAATCACCTTATTGCATGATGAATCTGATGCAGGAAGCACCAGTTTGCTACCGCCA TTGTTGTCATATGGTCCAAGATCAATGGTTCCAATACAAGTACCATCGTCATCAGACCTT GAGAGTATCCTGTCACCAGATCCAGTCTGCAGTGATCTTCAGTTGAAAGAGATAAACTAC AATGCTGCAGCAATGGATGAAAGCACTGAGCTCCTTCACTTGATTCTTGGTGGCAATGAT GAAGGATACAATACCACAACTGAATTACAAGTTTGGGATGTTCTGGACTTCTATGTCTCA GAAAACTTCTCGGCTCTCCAATTTGATAGTTTGATGGGTTTTACAAATGAAGTTAGTACT TCCTACAATGATTGTATGAATTTAGTTGACATGGTAGAGTGGCCCGTGGCTCGTCTGTCT CTAGATGATACACCAAAACTCAGTAACAGTGATGATGCGGTTCTGGCAGACAATGTCACA ACGGACCCTGATGAAACATCCTTATACCTTCGTACAAAACCAACAGATTCAGAAACTGAA AGTAGCTCTGACGCAGGAGATGTTGAAACTGAATATCTAGATCAAAAGCTACTTTCTAGA TGTCTGCCTGATTTAATGGATGTTGACTCGCCCAACCACTTACTGAAAACACCAGTGAGA ACAAAACATGTGACTCTTGTGCTTGATTTGGACGAGACTCTTGTACATTCAACATTGGAT CAGTGCGACAGTGCTGATTTTACCCTAGAAGTTTTCTTCAATATGAAAAATCACACAGTG TATGTGAAGAAAAGGCCTTACCTGAAAGTGTTTCTTGAGAAGGTTGCTCAGATGTTTGAG CTTGTCATTTTCACAGCTAGTCAGAGAATCTATGCTGAGCAACTTATAGATAAACTTGAT CCTGATGGAAAATATATCTCACGGCGTATTTATCGTGAATCTTGTATATTCTCTGACGGT TGCTATACAAAGGATCTGACAATCTTGGGGATCGACTTGGCGAAAGTTGCAATAGTTGAC AATACTCCACAGGTTTTCCAGTTGCAAGTGGATAACGGCATACCAATTAAGAGCTGGTTT GATGACCCCGCAGACCAGGAATTAATCGAGTTACTCCCGTTCCTGGAGAGCCTCGTGGAC TCAGATGACGTGAGGCCAATAATTTCGAAGGCCTTCCATGACAAACCTGAGTAG

Peptide Sequence

PEP ID	Zm00001d044144_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:3:220423625:220429269:-1 gene:Zm00001d044144 transcript:Zm00001d044144_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:CTD-phosphatase-like protein
Sequence	MEITLLHDESDAGSTSLLPPLLSYGPRSMVPIQVPSSSDLESILSPDPVCSDLQLKEINY NAAAMDESTELLHLILGGNDEGYNTTTELQVWDVLDFYVSENFSALQFDSLMGFTNEVST SYNDCMNLVDMVEWPVARLSLDDTPKLSNSDDAVLADNVTTDPDETSLYLRTKPTDSETE SSSDAGDVETEYLDQKLLSRCLPDLMDVDSPNHLLKTPVRTKHVTLVLDLDETLVHSTLD QCDSADFTLEVFFNMKNHTVYVKKRPYLKVFLEKVAQMFELVIFTASQRIYAEQLIDKLD PDGKYISRRIYRESCIFSDGCYTKDLTILGIDLAKVAIVDNTPQVFQLQVDNGIPIKSWF DDPADQELIELLPFLESLVDSDDVRPIISKAFHDKPE

Transcript Sequence

Transcript ID	Zm00001d044144_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:220423625:220429269:-1 gene:Zm00001d044144 gene_biotype:protein_coding transcript_biotype:protein_coding description:CTD-phosphatase-like protein
Sequence	GTCCCTGCCTGTGTTCTTGCCTCTTGCCTCTTGCGCCTTGCTAGCTTGCTTGCCTCCCTG CTCCCTCCTCCTCCCTCTTCCTCGTCGCTTCTCTGATTCTTCCTGGCCTTTGCCGGAGCA AGGCTAGGCGCGAGGAGAGGGTGCTGTGCTCAGCCAGAGGTCATCGGCGCTACGCGAGCG CACTGCCTGTGTACGTATCTCTTCTCGTCTCTCTCGAGCTCTGCGCTTGGTCTGGTCGGA GGTTTCGTGAGCACAAAGTTCTTGCCCCGTCTCTTTAGTAGTATCGATGCTTGTTCTCAA CTTTCTAGCGTGTGATTAAGCTGGGGACGGCCCTCTCAGTCTCTCACGGTGAATTTGGCG GCGAATTTGGTGGGTATTTGTGGTCTTTTGTAGCATGAACACGAGGAGATTTCGGCGAGC TGCTGAAAACGCGGAACTGTTCTGGTTTTTTTTCCTGTGTGAAATTCGAGTGCCGAAGGA CGATCCTGTAGTTCCAAGACTCTAAGCTCGACAGAGATGTTCGGTGAAGGCTGTTGGCCT GGTCTCTGTTCTCCGCACTTCTTTCTCCACTCGTGATTCTGCGCTGTGATTTTCCGACGA CGAGGAGTGAAGTGAGCCCCTCTTTTTGTGATGTGATGTCGGGAATTTTACGGGGTTAGT AGTGCTTTGACGTACGGTATATTCCGCATCCGATTTTCCTGTTGCAGGGGAGATTTGTGA TGGTCTAAAAACGAAAAGTAGAGGAAAGGGGGAAAAGGGGACGGATGCTGTCTGGTAGAG TTGTTACTTGCTGCCACTGCCAGAGGATCCAAGAGTATTAGCGGACCTGTTTTGCTTTGG CGAATTCACTTATAACATGCTCCCGGCATGCGAGAAGTGACAGCTGATTTCGAGTTTCGA GTAGAGTAAATTTGTTGACTAATACTATTGTTTAGTCAAAGACGCATATCTTTTTCTTGT TTTGTTAATAATGATTACATTTACATTACTTCCTTTGTCTACGGACTAATCGTCACAATA CTAAGTTTTTGTTTTTTCATGTCGAATTGATTAGCGCTTTCCCTTTACAGATTTATTAGT GGTTAAAGTATGTTCTTTCGACTGCATTAGGTTGTAGATAGTTCCTTGTTTCACCTTTTC TCCACTAATGTCTTTAGTGATATCAAATGTTTCAACAGTTGGCCTTTTCCTACTGGAACT GCAGTACTTTGAACATGCTTTTTGCAAATACTTGCACTAAGGATGAATAAAATGTTAAGC AACGACTGTTTAGGGACACAGGAGCCTCATACATTTTGCAAGACCACTGAAACACTGGAA CATTCACACCCTCAAGAGGTTACACTTGATAAAACGGTGGCGGGGTCAACGCTAATAAGT CATCAAAATGGTAAAGTCTTCATAGATTCCAGTCTCATTTACCTGGCTAGATTCATTTCA ATCTTTCCTACTGTCAATGAATTGTGCTTTTCCTGTTTGGAGCGTATATATGGTCAAAGC AGATCCACAGAAGATAATCTGTATTATATGCTATAGGTTGCGCCTTCGTAATCTGAAACT CTGAGTAAATACACTACCTGAAATGCAAAAAACCTCAGTTCTGGCCATGTTACAGGTACT GAGTACTAACTGCTGATATTTTGACTGACCAGTACCTTTTAACATGAAAGGACCCATTTG TGGCTTGTAAAGTAGAATCGGAAGCAGGGCGAAGGTAGGTAGTAATTAGGGGGTGCACAC GCACCCATATTTTTTTTGCAAAACTAGTAATTTAGACTAAATTTCCACCATATATGCACC ACCTATAAGTTATTACCATGCACTCCTAGGCCCTAAGTCATGTGCACCCCCCTCTGCTCT ACTCTAGCTTCGCCACTTATCGGAAGCATCTTTGTTCTGTCAAAGTGGAAAAAGAGAATG TTCTAGTTAGTATGTTAAATGATGGCAGGTGAATTAATATATCGTGAAGTAGTCTAAGAT ACTTAGATACAGTTCTTAGTTGTTCTTCATATTTCAATATGCTTTACAAATGTTATTGTT ATAAATGGCATGATACTGTTACAGTGGTACTGCATAACATTACTTCGACTATTGTAAGTT TATTTTTTATACAAAAAGAAAGAATTGCAGTGATTGTTTTGTACTGATCACGAAGTTCAA GTTTTAGTAAATTTGTGCACCCTCTTTCCCTCCCAAAAATCAACTTTACCTTCTGCTAGA ATCTAGGACCTTCGGCACAGAATTAGTTGGGTACAACATTACTGTATGGCTTATGTTACA CTAATCATATTTATGTATGTATTGAGATGCACTTTCACAAGCACATGGAGGTTTGAACTT GATCTGGGAAAACATAATTTAGCATATTAGTACCAATTTTATTTAGTAGATTATTTCTGG ACTGCAAGAATGTGTTCCAACTTTTTTTTCTTCCATCCCTTTTTGCAGTGTGCTGCACTG CCGGAGTATCAGGGGAAAACGCTGAAATCATGGAAATCACCTTATTGCATGATGAATCTG ATGCAGGAAGCACCAGTTTGCTACCGCCATTGTTGTCATATGGTCCAAGATCAATGGTTC CAATACAAGTACCATCGTCATCAGACCTTGAGAGTATCCTGTCACCAGATCCAGTCTGCA GTGATCTTCAGTTGAAAGAGATAAACTACAATGCTGCAGCAATGGATGAAAGCACTGAGC TCCTTCACTTGATTCTTGGTGGCAATGATGAAGGATACAATACCACAACTGAATTACAAG TTTGGGATGTTCTGGACTTCTATGTCTCAGAAAACTTCTCGGCTCTCCAATTTGATAGTT TGATGGGTTTTACAAATGAAGTTAGTACTTCCTACAATGATTGTATGAATTTAGTTGACA TGGTAGAGTGGCCCGTGGCTCGTCTGTCTCTAGATGATACACCAAAACTCAGTAACAGTG ATGATGCGGTTCTGGCAGACAATGTCACAACGGACCCTGATGAAACATCCTTATACCTTC GTACAAAACCAACAGATTCAGAAACTGAAAGTAGCTCTGACGCAGGAGATGTTGAAACTG AATATCTAGATCAAAAGCTACTTTCTAGATGTCTGCCTGATTTAATGGATGTTGACTCGC CCAACCACTTACTGAAAACACCAGTGAGAACAAAACATGTGACTCTTGTGCTTGATTTGG ACGAGACTCTTGTACATTCAACATTGGATCAGTGCGACAGTGCTGATTTTACCCTAGAAG TTTTCTTCAATATGAAAAATCACACAGTGTATGTGAAGAAAAGGCCTTACCTGAAAGTGT TTCTTGAGAAGGTTGCTCAGATGTTTGAGCTTGTCATTTTCACAGCTAGTCAGAGAATCT ATGCTGAGCAACTTATAGATAAACTTGATCCTGATGGAAAATATATCTCACGGCGTATTT ATCGTGAATCTTGTATATTCTCTGACGGTTGCTATACAAAGGATCTGACAATCTTGGGGA TCGACTTGGCGAAAGTTGCAATAGTTGACAATACTCCACAGGTTTTCCAGTTGCAAGTGG ATAACGGCATACCAATTAAGAGCTGGTTTGATGACCCCGCAGACCAGGAATTAATCGAGT TACTCCCGTTCCTGGAGAGCCTCGTGGACTCAGATGACGTGAGGCCAATAATTTCGAAGG CCTTCCATGACAAACCTGAGTAGAAATAGTCCTGGAGAGCTGGAGAGGTTCACTGGAATT AATCCAGTGAACCTCTCGCTGAAGTTAGCTTCGCTCCACACGGTGCAGGCCATTCTTGGG AAGTTAGGTATAGGATCAAGATTCACCATTTATGTTATGTTAGCTGTTACAAATAGCAAG CATAAACTGCGGTCGTCGATGAAAATGGCTTGTGTGTGTATGTCCCTTCGGTGTTCCGTG TCACAGATCATTGTACAGAGACGAACAATAGTGCTGAATAAAGTGATCTGAGT