Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044132_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:3:220048364:220051924:-1 gene:Zm00001d044132 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase A1
Sequence	ATGGGGCGTAGGACATGTGGCACGGCCTTCATCCTTCTCTACGTGCTGTCTACGTCGACA TTGCCCGCGTCGTCATCGAACACCGGCGACGGCCTCATCCGCATCCCGCTGAAGAAGAGA TCGATAATGGACACCATCTACGGCGACCTCCTGCCGAAGCCGAGCGCGCCGGAGGAGAAG GAGAAGCAAGCCGTCGACGACCCGGTGCGGGACGCCATAGCCCGAGCACGCGAGCGGCAG CACGAAATGCTGGTCCAGGCCGCTGCCACGGAACGCAGGCGCAGGTACTACTGGAGCTAC AGCGGGGCCGGGGGCAAGGGAAACGGCAGCCGTCTGCATGACGGAGGCCAGGGCGAGGGG TCGGGGAGCATCGCCATCGTTGCGCTCAAGAACTTCCTCAACGCCCAGTACTTTGGGCAG ATCGGGGTCGGCTGCCCGCCGCAGAACTTCACCGTCGTCTTCGACACCGGGAGCGCCAAC CTCTGGGTCCCTTCTGCCAAGTGCTTTTTCTCGCTCGCGTGTTTATTCCATCCCAAGTAT GACTCCCGCCAGTCCAGCACTTACAAACCGAATGGAACACCGGCTTCTATTCACTACGGG ACGGGAGGGATTGCTGGTTTTTACAGCCAAGACCAGGTCACGGTTGGCAATCTGGTAGTT CAAAACCAGGAGTTCATCGAAGCCACTCACGAGCCTGGCTTCACCTTTCTACTGGCAAAA TTCGACGGCATCCTCGGGCTTGCATTTCAGGAAATTTCAGTTGAAGGTTCACTTCCAGTA TGGTACAATATGGTGAACCAAAACCTAGTGGCGCAGCCTGTTTTCTCCTTCTGGTTAAAC CGGAACCCATTCGACGGGGAAGGGGGCGAAATTGTGTTTGGAGGTTCTGACGAACAGCAT TACAAAGGAAGCCATACGTACACCAGGGTCACTCGGAAAGGCTACTGGCAGTTTGAAATG GGTGACTTTCTCATTGGCGGAAGGAGCACTGGAATCTGTGTGGATGGTTGTGCGGCCATT GCAGACTCTGGGACTTCGCTGATTGCTGGTCCTCTAGTAAGCAAAATATCACTGATGTAT ACCTTATGTTTATTACACAAATGTGCTAACAAAAGCCTTGAAACTGGCGTTGAAATTACT GTCTCATGA

Peptide Sequence

PEP ID	Zm00001d044132_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:3:220048364:220051924:-1 gene:Zm00001d044132 transcript:Zm00001d044132_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase A1
Sequence	MGRRTCGTAFILLYVLSTSTLPASSSNTGDGLIRIPLKKRSIMDTIYGDLLPKPSAPEEK EKQAVDDPVRDAIARARERQHEMLVQAAATERRRRYYWSYSGAGGKGNGSRLHDGGQGEG SGSIAIVALKNFLNAQYFGQIGVGCPPQNFTVVFDTGSANLWVPSAKCFFSLACLFHPKY DSRQSSTYKPNGTPASIHYGTGGIAGFYSQDQVTVGNLVVQNQEFIEATHEPGFTFLLAK FDGILGLAFQEISVEGSLPVWYNMVNQNLVAQPVFSFWLNRNPFDGEGGEIVFGGSDEQH YKGSHTYTRVTRKGYWQFEMGDFLIGGRSTGICVDGCAAIADSGTSLIAGPLVSKISLMY TLCLLHKCANKSLETGVEITVS

Transcript Sequence

Transcript ID	Zm00001d044132_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:220048364:220051924:-1 gene:Zm00001d044132 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase A1
Sequence	GGGCTTCCAATCCTTCCCCTCTCGGCAGCTATCCGTCGCCAGTGCGTGTTTTTGTTTCCC GCTCTCGCGATCTCTACTCTCGTCTCTCGTGCAAGCTCTAAGGCAAGGATGGGGCGTAGG ACATGTGGCACGGCCTTCATCCTTCTCTACGTGCTGTCTACGTCGACATTGCCCGCGTCG TCATCGAACACCGGCGACGGCCTCATCCGCATCCCGCTGAAGAAGAGATCGATAATGGAC ACCATCTACGGCGACCTCCTGCCGAAGCCGAGCGCGCCGGAGGAGAAGGAGAAGCAAGCC GTCGACGACCCGGTGCGGGACGCCATAGCCCGAGCACGCGAGCGGCAGCACGAAATGCTG GTCCAGGCCGCTGCCACGGAACGCAGGCGCAGGTACTACTGGAGCTACAGCGGGGCCGGG GGCAAGGGAAACGGCAGCCGTCTGCATGACGGAGGCCAGGGCGAGGGGTCGGGGAGCATC GCCATCGTTGCGCTCAAGAACTTCCTCAACGCCCAGTACTTTGGGCAGATCGGGGTCGGC TGCCCGCCGCAGAACTTCACCGTCGTCTTCGACACCGGGAGCGCCAACCTCTGGGTCCCT TCTGCCAAGTGCTTTTTCTCGCTCGCGTGTTTATTCCATCCCAAGTATGACTCCCGCCAG TCCAGCACTTACAAACCGAATGGAACACCGGCTTCTATTCACTACGGGACGGGAGGGATT GCTGGTTTTTACAGCCAAGACCAGGTCACGGTTGGCAATCTGGTAGTTCAAAACCAGGAG TTCATCGAAGCCACTCACGAGCCTGGCTTCACCTTTCTACTGGCAAAATTCGACGGCATC CTCGGGCTTGCATTTCAGGAAATTTCAGTTGAAGGTTCACTTCCAGTATGGTACAATATG GTGAACCAAAACCTAGTGGCGCAGCCTGTTTTCTCCTTCTGGTTAAACCGGAACCCATTC GACGGGGAAGGGGGCGAAATTGTGTTTGGAGGTTCTGACGAACAGCATTACAAAGGAAGC CATACGTACACCAGGGTCACTCGGAAAGGCTACTGGCAGTTTGAAATGGGTGACTTTCTC ATTGGCGGAAGGAGCACTGGAATCTGTGTGGATGGTTGTGCGGCCATTGCAGACTCTGGG ACTTCGCTGATTGCTGGTCCTCTAGTAAGCAAAATATCACTGATGTATACCTTATGTTTA TTACACAAATGTGCTAACAAAAGCCTTGAAACTGGCGTTGAAATTACTGTCTCATGAGGG AGGGTTTTTTTTCATAGTATAGTAGTATCCTCTACTGTGCAGGTTGCCATTGCCCAGATC AATGAACAGATTGGAGCGGCCGGGGTGGTCAACCAAGAGTGCAAACAGGTCGTTGCTGGT TACGGGCTACAAATTGCAGGGCTGCTGGAAGCTCAGCAGACACCACCATCAGAAGTGTGC TCGAAGGTCGGGCTCTGCACGTTCGATGGGACACGCGGAGTAAGTGCTGCTGGCATCGAG AGTGTACCGGGATCCGTAGACGGCATGGCGGAAGCTCTATGCAACGCGTGCGAGATAGTA GTGTTCTGGACGCAAAGCGAGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTAC GTGGACAGGCTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGC GTGGGTTCCCTGCAGACCGTTGCGTTCAGCATCGGTGGAAGGGCGTTCGAGCTCCGGCCT GACCAGTACGTCCTCAAGGTCGGCGAGGGGTTCGCCGCGCACTGCATCAGCGGGTTCACG GCTCTGGACGTGCCCCCTCCGGTAGGCCCTCTGTGGATACTGGGTGACGTCTTCATGGGA GCCTACCATACCATCTTTGACTACGGCAAGATGAGGATCGGGTTCGCAGATTCCGCGTGA GACACGGGCGTTCTTCCACTAATGACCGCGACCACTATAGCTGCAGTATGTTCCTCAGAG AAGCCCTGCGTGGTGTAGTGCTGGATTTTCACTACTACGCCCTGCAGAGCTTTTCTCGAG CTTCTGTAGAGCACATACACTACGCGCAGGACAAATGTGTATCGCTGCATCGAGAAAGAA ATAAAGGAAACAAT