Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044129_T024
CDS Infomation	cds chromosome:B73_RefGen_v4:3:219980027:219986317:-1 gene:Zm00001d044129 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:shrunken2 description:Glucose-1-phosphate adenylyltransferase large subunit 1%2C chloroplastic/amyloplastic
Sequence	ATGCAGTTTGCACTTGCATTGGACACGAACTCAGGTCCTCACCAGATAAGATCTTGTGAG GGTGATGGGATTGACAGGTTGGAAAAATTAAGTATTGGGGGCAGAAAGCAGGAGAAAGCT TTGAGAAATAGGTGCTTTGGTGGTAGAGTTGCTGCAACTACACAATGTATTCTTACCTCA GATGCTTGTCCTGAAACTCTTCATTCTCAAACACAGTCCTCTAGGAAAAATTATGCTGAT GCAAACCGTGTATCTGCTATCATTTTGGGCGGAGGCACTGGATCTCAGCTCTTTCCTCTG ACAAGCACAAGAGCTACGCCTGCTGTACCTGTTGGAGGATGTTACAGGCTTATTGATATC CCTATGAGTAACTGCTTCAACAGTGGTATAAATAAGATATTTGTGATGAGTCAGTTCAAT TCTACTTCGCTTAACCGCCATATTCATCGTACATACCTTGAAGGCGGGATCAACTTTGCT GATGGATCTGTACAGGTATTAGCGGCTACACAAATGCCTGAAGAGCCAGCTGGATGGTTC CAGGGTACAGCAGACTCTATCAGAAAATTTATCTGGGTACTCGAGGATTATTACAGTCAC AAATCCATTGACAACATTGTAATCTTGAGTGGCGATCAGCTTTATCGGATGAATTACATG GAACTTGTGCAGAAACATGTCGAGGACGATGCTGATATCACTATATCATGTGCTCCTGTT GATGAGAGCCGAGCTTCTAAAAATGGGCTAGTGAAGATTGATCATACTGGACGTGTACTT CAATTCTTTGAAAAACCAAAGGGTGCTGATTTGAATTCTATGAGAGTTGAGACCAACTTC CTGAGCTATGCTATAGATGATGCACAGAAATATCCATACCTTGCATCAATGGGCATTTAT GTCTTCAAGAAAGATGCACTTTTAGACCTTCTCAAGTCAAAATATATTCAATTACATGAC TTTGGATCTGAAATCCTCCCAAGAGCTGTACTAGATCATAGTGTGCAGGCATGCATTTTT ACGGGCTATTGGGAGGATGTTGGAACAATCAAATCATTCTTTGATTTTTATGATCCAAAA ACACCTTTCTTCACTGCACCCCGATGCTTGCCTCCGACGCAATTGGACAAGTGCAAGATG AAAGATGCATTTATCTCAGATGGTTGCTTACTGAGAGAATGCAACATCGAGCATTCTGTG ATTGGAGTCTGCTCACGTGTCAGCTCTGGATGTGAACTCAAGGACTCCGTGATGATGGGA GCGGACACCTATGAAACTGAAGAAGAAGCTTCAAAGCTACTGTTAGCTGGGAAGGTCCCA GTTGGAATAGGAAGGAACACAAAGATAAGGAACTGTATCATTGACATGAATGCTAGGATT GGGAAGAACGTGGTGATCACAAACAGTAAGGGCATCCAAGAGGCTGATCACCCGGAAGAA GGGTACTACATAAGGTCTGGAATCGTGGTGATCTTGAAGAATGCAACCATCAACGATGGG TCTGTCATATAG

Peptide Sequence

PEP ID	Zm00001d044129_P024
PEP Infomation	pep chromosome:B73_RefGen_v4:3:219980027:219986317:-1 gene:Zm00001d044129 transcript:Zm00001d044129_T024 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:shrunken2 description:Glucose-1-phosphate adenylyltransferase large subunit 1%2C chloroplastic/amyloplastic
Sequence	MQFALALDTNSGPHQIRSCEGDGIDRLEKLSIGGRKQEKALRNRCFGGRVAATTQCILTS DACPETLHSQTQSSRKNYADANRVSAIILGGGTGSQLFPLTSTRATPAVPVGGCYRLIDI PMSNCFNSGINKIFVMSQFNSTSLNRHIHRTYLEGGINFADGSVQVLAATQMPEEPAGWF QGTADSIRKFIWVLEDYYSHKSIDNIVILSGDQLYRMNYMELVQKHVEDDADITISCAPV DESRASKNGLVKIDHTGRVLQFFEKPKGADLNSMRVETNFLSYAIDDAQKYPYLASMGIY VFKKDALLDLLKSKYIQLHDFGSEILPRAVLDHSVQACIFTGYWEDVGTIKSFFDFYDPK TPFFTAPRCLPPTQLDKCKMKDAFISDGCLLRECNIEHSVIGVCSRVSSGCELKDSVMMG ADTYETEEEASKLLLAGKVPVGIGRNTKIRNCIIDMNARIGKNVVITNSKGIQEADHPEE GYYIRSGIVVILKNATINDGSVI

Transcript Sequence

Transcript ID	Zm00001d044129_T024
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:219980027:219986317:-1 gene:Zm00001d044129 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:shrunken2 description:Glucose-1-phosphate adenylyltransferase large subunit 1%2C chloroplastic/amyloplastic
Sequence	CACAAGATCACTTCGGGAGGCAAGTGCGATTTCGATCTCGCAGCCACCTTTTTTTTGTTC TGTTGTGTATCTAGTAGTTGGAGGAGATATGCAGTTTGCACTTGCATTGGACACGAACTC AGGTCCTCACCAGATAAGATCTTGTGAGGGTGATGGGATTGACAGGTTGGAAAAATTAAG TATTGGGGGCAGAAAGCAGGAGAAAGCTTTGAGAAATAGGTGCTTTGGTGGTAGAGTTGC TGCAACTACACAATGTATTCTTACCTCAGATGCTTGTCCTGAAACTCTTCATTCTCAAAC ACAGTCCTCTAGGAAAAATTATGCTGATGCAAACCGTGTATCTGCTATCATTTTGGGCGG AGGCACTGGATCTCAGCTCTTTCCTCTGACAAGCACAAGAGCTACGCCTGCTGTACCTGT TGGAGGATGTTACAGGCTTATTGATATCCCTATGAGTAACTGCTTCAACAGTGGTATAAA TAAGATATTTGTGATGAGTCAGTTCAATTCTACTTCGCTTAACCGCCATATTCATCGTAC ATACCTTGAAGGCGGGATCAACTTTGCTGATGGATCTGTACAGGTATTAGCGGCTACACA AATGCCTGAAGAGCCAGCTGGATGGTTCCAGGGTACAGCAGACTCTATCAGAAAATTTAT CTGGGTACTCGAGGATTATTACAGTCACAAATCCATTGACAACATTGTAATCTTGAGTGG CGATCAGCTTTATCGGATGAATTACATGGAACTTGTGCAGAAACATGTCGAGGACGATGC TGATATCACTATATCATGTGCTCCTGTTGATGAGAGCCGAGCTTCTAAAAATGGGCTAGT GAAGATTGATCATACTGGACGTGTACTTCAATTCTTTGAAAAACCAAAGGGTGCTGATTT GAATTCTATGAGAGTTGAGACCAACTTCCTGAGCTATGCTATAGATGATGCACAGAAATA TCCATACCTTGCATCAATGGGCATTTATGTCTTCAAGAAAGATGCACTTTTAGACCTTCT CAAGTCAAAATATATTCAATTACATGACTTTGGATCTGAAATCCTCCCAAGAGCTGTACT AGATCATAGTGTGCAGGCATGCATTTTTACGGGCTATTGGGAGGATGTTGGAACAATCAA ATCATTCTTTGATTTTTATGATCCAAAAACACCTTTCTTCACTGCACCCCGATGCTTGCC TCCGACGCAATTGGACAAGTGCAAGATGAAAGATGCATTTATCTCAGATGGTTGCTTACT GAGAGAATGCAACATCGAGCATTCTGTGATTGGAGTCTGCTCACGTGTCAGCTCTGGATG TGAACTCAAGGACTCCGTGATGATGGGAGCGGACACCTATGAAACTGAAGAAGAAGCTTC AAAGCTACTGTTAGCTGGGAAGGTCCCAGTTGGAATAGGAAGGAACACAAAGATAAGGAA CTGTATCATTGACATGAATGCTAGGATTGGGAAGAACGTGGTGATCACAAACAGTAAGGG CATCCAAGAGGCTGATCACCCGGAAGAAGGGTACTACATAAGGTCTGGAATCGTGGTGAT CTTGAAGAATGCAACCATCAACGATGGGTCTGTCATATAGATCGGCTGCGTTTGCGTCTA CAAAACAAGAACCTACAATGGTATTGCATCGATGGATCGTGTAACCTTGGTATGGTAAGA GCCGCTTGACAGGAAGTCGAGCGTTCGGGCGCAAGATGCGTTGTCTGGCATGCTGTTCCT TGACCATTTGTGCTGCTAGTATGTACTGTTATAAGCTGCCCTAGAAGTTGCAGCAAACCT TTTTATGAACCTTTGTATTT