Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044110_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:3:219541903:219545347:-1 gene:Zm00001d044110 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	ATGAAGCTGGGAGCAAAAGGCCTCGGCCTCCTGCTCCTCCTTGTCCTGCTTGCGCTTTGC TCCACCATTGAAGTCGGCGAGGCAAGAAGAGACCGGCATTGGAGGTCGTCGAGGACCTCC TCCTCTCAGCTGCTGAAGAAAGGCAAAGGAAAGAAGACCAGCTCCCGCCGCCAATACGGC AGCAACCGGCCAAGTCCGAAGCCACCGGCCAGCTCGACACCGAGCTCTGGTGCCGGCGGC AAAGGAAACCAGACTCCGTACCAACCAAGCCCGAATGCCCCTCACATCCCGAGGCCAAGC CCCCCTGCCAATGGCAGCGCCCATTCCACTCCCAAGCCGCCGACTCCTCCAAGCTGCGGG AAGGCTCATCAGCAGCCATCACAGTCACAGCCGCCACCACCAGCAACCTCCTCGCAGCAT GGTGCAGTATTCAATGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACT AAGGCTTTTCAAGGAGCGTGGGCTGCTGCCTGCACCCAGGGGGCATCTACACTTCTCGTA CCACCAGAACTAGAGTTCCTTGTTGGGCCAATCTCGTTCTCTGGGCCTTACTGCAAACCG AATATTGTCTTTCAGTTGGAAGGAACAATCCTAGCTCCAATCAGTGCTAAATCCTGGGGT TCTGGCTTGCTCCAGTGGCTCGAGTTCACCAAACTAAATGGGATAGTTATTCAAGGGAAC GGCATTATAAATGGCAGAGGGCAACAATGGTGGACCTACTCAGACCCAGAGGATGAGGAT GATGATGACACGTACCATGTAGAGTTTCAAAGAATGCCACAGATTAAACCTACAGCGTTG AGGTTTTATGGTAGTTTCAACGTTGTAGTGTCTGGTATCACTATTGTCAACAGCTCACAG TGCCATCTTAAGTTCGACAACTGTCAAGGAGTGATGGTCCATGATGTGACCATATCCTCC CCTGAGAACAGTCTCAACACTGACGGAATACACCTGCAGAACTCCAAAGATGTCAGCATT CATCATACAACCCTGGCTTGTGGTGATGATTGCATCTCCATCCAGACAGGATGCAGCAAC ATAAATATACACAACGTGAATTGTGGACCAGGCCATGGAATCAGCATAGGTGGACTAGGC CGAGACAACACAAAAGCATGTGTATCAAATGTTACAGTAAGAGATGTCAACATGTTCAGA ACCATGAATGGTGTCAGAATCAAGACCTGGCAGGGTGGCGTAGGATTGGTTCAAGACATA AGGTTCTCAAATATACAAGTCTCAGAGGTTCAAACACCCATTATCATAGATCAGTTTTAT TGTGACAGAAGCACTTGCAGGAATCAAACATCAGCAGTGGCAGTATCAGGGGTTCAATAC GAGAATATCAGAGGAACATTTACAATCAAGCCTGTCCATTTTGCATGCAGTGACAGCTTA CCTTGTTCAGGAATCTCTCTTACTGGTGTGCAACTCAGGCCAGTGCAAGTACCCCACTAC CACCTGAATAACCCATTCTGCTGGCAAGCTTTTGGGGAGCTCTACACTCCAACCGTCCCT CCCATAGCTTGCTTGCAGATTGGAAAACCTGCTGGCAATAACTTACAGTCATATGACGAC ATATGTTGA

Peptide Sequence

PEP ID	Zm00001d044110_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:3:219541903:219545347:-1 gene:Zm00001d044110 transcript:Zm00001d044110_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	MKLGAKGLGLLLLLVLLALCSTIEVGEARRDRHWRSSRTSSSQLLKKGKGKKTSSRRQYG SNRPSPKPPASSTPSSGAGGKGNQTPYQPSPNAPHIPRPSPPANGSAHSTPKPPTPPSCG KAHQQPSQSQPPPPATSSQHGAVFNVVDFGAKGDGVTDDTKAFQGAWAAACTQGASTLLV PPELEFLVGPISFSGPYCKPNIVFQLEGTILAPISAKSWGSGLLQWLEFTKLNGIVIQGN GIINGRGQQWWTYSDPEDEDDDDTYHVEFQRMPQIKPTALRFYGSFNVVVSGITIVNSSQ CHLKFDNCQGVMVHDVTISSPENSLNTDGIHLQNSKDVSIHHTTLACGDDCISIQTGCSN INIHNVNCGPGHGISIGGLGRDNTKACVSNVTVRDVNMFRTMNGVRIKTWQGGVGLVQDI RFSNIQVSEVQTPIIIDQFYCDRSTCRNQTSAVAVSGVQYENIRGTFTIKPVHFACSDSL PCSGISLTGVQLRPVQVPHYHLNNPFCWQAFGELYTPTVPPIACLQIGKPAGNNLQSYDD IC

Transcript Sequence

Transcript ID	Zm00001d044110_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:219541903:219545347:-1 gene:Zm00001d044110 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	AACCACAGGCCTCCCGCGCTCTATTCTCTCTATCAGCAGGCCAGCACACAATACACACAC TCTAATCTCTCCACACAGCCAACACAGATACGGACAGGACAGGAGGATGAAGCTGGGAGC AAAAGGCCTCGGCCTCCTGCTCCTCCTTGTCCTGCTTGCGCTTTGCTCCACCATTGAAGT CGGCGAGGCAAGAAGAGACCGGCATTGGAGGTCGTCGAGGACCTCCTCCTCTCAGCTGCT GAAGAAAGGCAAAGGAAAGAAGACCAGCTCCCGCCGCCAATACGGCAGCAACCGGCCAAG TCCGAAGCCACCGGCCAGCTCGACACCGAGCTCTGGTGCCGGCGGCAAAGGAAACCAGAC TCCGTACCAACCAAGCCCGAATGCCCCTCACATCCCGAGGCCAAGCCCCCCTGCCAATGG CAGCGCCCATTCCACTCCCAAGCCGCCGACTCCTCCAAGCTGCGGGAAGGCTCATCAGCA GCCATCACAGTCACAGCCGCCACCACCAGCAACCTCCTCGCAGCATGGTGCAGTATTCAA TGTGGTTGATTTTGGAGCCAAGGGTGACGGAGTTACAGACGATACTAAGGCTTTTCAAGG AGCGTGGGCTGCTGCCTGCACCCAGGGGGCATCTACACTTCTCGTACCACCAGAACTAGA GTTCCTTGTTGGGCCAATCTCGTTCTCTGGGCCTTACTGCAAACCGAATATTGTCTTTCA GTTGGAAGGAACAATCCTAGCTCCAATCAGTGCTAAATCCTGGGGTTCTGGCTTGCTCCA GTGGCTCGAGTTCACCAAACTAAATGGGATAGTTATTCAAGGGAACGGCATTATAAATGG CAGAGGGCAACAATGGTGGACCTACTCAGACCCAGAGGATGAGGATGATGATGACACGTA CCATGTAGAGTTTCAAAGAATGCCACAGATTAAACCTACAGCGTTGAGGTTTTATGGTAG TTTCAACGTTGTAGTGTCTGGTATCACTATTGTCAACAGCTCACAGTGCCATCTTAAGTT CGACAACTGTCAAGGAGTGATGGTCCATGATGTGACCATATCCTCCCCTGAGAACAGTCT CAACACTGACGGAATACACCTGCAGAACTCCAAAGATGTCAGCATTCATCATACAACCCT GGCTTGTGGTGATGATTGCATCTCCATCCAGACAGGATGCAGCAACATAAATATACACAA CGTGAATTGTGGACCAGGCCATGGAATCAGCATAGGTGGACTAGGCCGAGACAACACAAA AGCATGTGTATCAAATGTTACAGTAAGAGATGTCAACATGTTCAGAACCATGAATGGTGT CAGAATCAAGACCTGGCAGGGTGGCGTAGGATTGGTTCAAGACATAAGGTTCTCAAATAT ACAAGTCTCAGAGGTTCAAACACCCATTATCATAGATCAGTTTTATTGTGACAGAAGCAC TTGCAGGAATCAAACATCAGCAGTGGCAGTATCAGGGGTTCAATACGAGAATATCAGAGG AACATTTACAATCAAGCCTGTCCATTTTGCATGCAGTGACAGCTTACCTTGTTCAGGAAT CTCTCTTACTGGTGTGCAACTCAGGCCAGTGCAAGTACCCCACTACCACCTGAATAACCC ATTCTGCTGGCAAGCTTTTGGGGAGCTCTACACTCCAACCGTCCCTCCCATAGCTTGCTT GCAGATTGGAAAACCTGCTGGCAATAACTTACAGTCATATGACGACATATGTTGAGAAAC TGAAAGTGCCTTTGTCTGTTCATTGGTGCTTATCCATGAGTGGTCGTTGTGATACATGCG ACCCCATTTGCACCATTGCTTGTTGATGTGCACATATACAGTTATTTTGAGGTCATCATA TCACAACATTTTAATCTTTTCATCAAAGTAAACATAAATATATTCATATGAAATGG