Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d044023_T045
CDS Infomation

cds chromosome:B73_RefGen_v4:3:217003272:217008683:1 gene:Zm00001d044023 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M50 family protein
Sequence

ATGGAAGTCCCTGAAATATCTCCTATGTCAGAATACTTGTCCACTCATGATGTTATTCTT
TCTGTGGATGGTCTGAAAATAACCAGAACTGATGATTGGATCAAGATTCTGAACCAAGGT
ACTACAGCGAAATCTAGGGATCCTGAATTCCTTGAAGGCTCTCATAGATATGTTGCCACT
AGTTCTACCAAGGGTTATTGCGTGCCCGATTCATGGATAGATGCAAGCAAAAATCTCTGG
CAGATAAGAGACAAGCTGCCTTGCCCAGATGAACTGATAGCCTTCGAAAAAGTTATCTGT
AACGTCTCAACCATTTTGACAGAGAAGACTAGCATAGGTAGTGACCAGAAGGAAGTTGAG
GGAAAATATTGTTTGATTGCGAAAGATGTAGTAAAGCTTAGAAGATGTGGAAACGGATGG
CACATGACTGAAGATGATGAAAGTAGCTGTGCATGTTTTGAGGATGAGCACTGTTTGGTA
CCTGTTCTGAACCCAGGCTTTTCATGGATTGAGGTCTCCTATGCCAGGCCATACTCTTTG
AGATGTTTACAAAAAGGAGGAAATTTGTTATCATCACATACTGCAAATAGTAACTTTGGA
CAGAGTCCTTGTGAAGGATCTTTTGTTTATGTGGGTGATCTGTCATCAGCAGCACGTTCG
GTTAGGTTATCCCGCTACCGACCTCGATGGGCACTTCTACTTTTCATTGCAGACATCCCA
TATATCTTGGAAAATGGTTTAAGTAGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATC
AATTGCCTACCGGTGTATTTTCTGGATGGTGAAGCGATTCTGGAGACTACCTTAAGCTAT
GTAGCTTGGTTTACCCCAAGACTGCAACGCAGAATTCTAAAAGTATGCAGCGTGGTGTGG
ACGGGTTTATTAGTCATTACTTTCTCAAGTATTTGTTATTCCACAGTGCTACATTATGGC
GTATAG

Peptide Sequence

PEP ID

Zm00001d044023_P045
PEP Infomation

pep chromosome:B73_RefGen_v4:3:217003272:217008683:1 gene:Zm00001d044023 transcript:Zm00001d044023_T045 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M50 family protein
Sequence

MEVPEISPMSEYLSTHDVILSVDGLKITRTDDWIKILNQGTTAKSRDPEFLEGSHRYVAT
SSTKGYCVPDSWIDASKNLWQIRDKLPCPDELIAFEKVICNVSTILTEKTSIGSDQKEVE
GKYCLIAKDVVKLRRCGNGWHMTEDDESSCACFEDEHCLVPVLNPGFSWIEVSYARPYSL
RCLQKGGNLLSSHTANSNFGQSPCEGSFVYVGDLSSAARSVRLSRYRPRWALLLFIADIP
YILENGLSSLLHASAALAVINCLPVYFLDGEAILETTLSYVAWFTPRLQRRILKVCSVVW
TGLLVITFSSICYSTVLHYGV

Transcript Sequence

Transcript ID

Zm00001d044023_T045
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:217003272:217008683:1 gene:Zm00001d044023 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M50 family protein
Sequence

TATTTTTTTCTCTCTTACATGTTGCGTGCTTTTTGTTCAGTTCACCTGGTACTCAAAACA
TCTGTAAGCGAGGAAAATAGGCGGCAAATAGTGGGTTTATTATGAGGGAATAAATTACTG
GATTATATAGGCAAGGATGTTCTAGGGTTTTAGTTTATAGAAATGACACCAATCACAGAG
GTCCTTGTGACCTTGCCTACCACAAAATTGATATGTGTGTGTGCGCGCGCGCGTGTGGTG
TGTGTGTGTGTGTGGGGGGGGGGGCACATGCACAGCAATAAGGCCCACAGCCTAAACCAA
TTATCTGTCTAAAAACTCTCATGAATTATTTTGTTTCATATTCTGACACATCATTTGCTA
CTTACACAACAGTGAGGGACTACAGATTGAATATGTTGCTATATTTGTCGCTGTACTTTT
TCCTGGGGCATTTGTTGCTCTGAACTATGACCTACTACAAAATATGCCTCTCTTTTCCAT
GCTTCGGATTTATTGTGCAGGGATTTGGAATAATGTTATGGTAAGTCATGCTGTTATGCA
TTTATTATTTCCAAAAGATAGAAATAAGTTCATTTATTGATTGTGCCTCTTTGTATCTTC
GTAATGCATTGTCATATACTTTTGATATTTGGGTACTTGATGCTACCTCATATAGAAGTA
GTTTAATCATTAAAAGGAAAATGCATAACTATTTGTTTACTTGCAATAATGAAGGCAACG
AGAAGTAAGAACAATATACTCTATGCAGTCTAGCGTAAGATGCAATTGGTCTCACTAAAT
ATTTGTTCGAAATAATGTGAGCAAAGTTATTGTAGAGAATTAGGGAACACCTCACACCCA
ATTAGGGGGTGGCTTTCATATATATGTAGTCATGTACAACTTGGAATACAATATGTGTTA
GACTATACATACCTCTAATACCTGCCCACAGTCACAACTGTAGGGAACTGAATGAGACTG
GACCTGAAGACATTGAACTACTGTGTAAGCAGTCTCTTAGTCATAATGTACGTGAACTGA
TTAGTTGAGGCCACATGGAGTACCCTAAAGCCACCTTCTCACGAACAAAGTGGATGTCAA
TTGTCAATGTCTATATGCTTCGTACGACGATGGTGAACCGAATTGGCAGTCATATAGACT
GTGGTGACATTGTCACAATAGACAATGGTCGCCAAACCGAGTGATAGTCTGAAATTGACC
ATCGACTATGTTAAAGCTATCGTGAGGGAGGCTACACTTGAGGCTTCGTCGGGCAAACGG
GAGCCCTTGCCCCCATCGGTTGCGGCAAGTCCAGAGCAGCAACCTTCTTCAGCGATGGAG
GCGGAAAAGAACGCCGCTGAGGAACTATCTTTTCTAAAGCACGCAACTTTGGGAAAATAT
TGTCTGATTGTGGCGAAGAAGAAAGATGAAGGCTCTTTGGCGCGACCTGTTGACTAGGTG
TAAATTTTGTACACTAGGCCATGCTGAAGATTCGTTAGGTTGAGTTTTGCTTGAAGGCCT
TGGAAAATATTATGTCTGATTGTCTGCCACGCTTCAATTGTCGACCAATACATCATGCAC
GGTGAAGCTTATATTACAGTTGATTACCATGATATTGCTGTGTGGGTAATATCTTAGCCG
AAGGTCATCTTGAGTGAATGTTACAGGCATATGAACCACTTAGATCTGATATAGGACCCC
TGAACACCTATATGTTGGACCCTCCTTTGAAGTTCTTGTTTTTATCTCTTATTGAGTGGC
CCGAAGCTTGATCTTCTCATTATTGGGAATATGTGCTTTGCTGGTGGAACTAAGTTGTTG
ACGTCTGAGCTTTGGGCTCTTCCCTTCTACTGAGCTGGCTATGTTCTCGTATGTGGCGTT
TTTGTGGAGGTTGATTATATAACATTGGATCATATTGTGATGGGTCTGGTAGTTGGGGGT
TGTAAGCTTCCCACTGTTGTGACTGATGTTGCACAATTGGGCTTGAGGACGAAGAATGTG
AGTTCTGCCCTTGATGCTGGATGTATGACACATCATAGTTAGTCGAGCATTAAGATGATG
TATGGCACACATTCTTCGGCTGGCCTTCCTGCTTCACGGTTGCCAATTCCTTATGCTTTT
GGATGGTGATGCTACAATATTTTGTTGTATGCTCTTTATTCTCCCCGCAAAATACACAAT
ACTAGTCAATGGCGCGCGCCAGCGCTTGCATAGGATTTCCCTTTTTTTACTGGGAAGGTA
GAGCGGCACAACAACAGTCGTCGCCCACGCGTGCGGCTAGATGTACCAACGGCCAAGATT
TTTCGCGCGACATGGATAGTGCGAATGTCGAGGAAGTTGCATCGGTTTAATAAGAAGAAA
TAGCTTTCTTGATTGACCGTTGTTGGAGTACCTGCCTCCAAAGGTGTGGCCCCCCTTCTG
TCCCTTTGTGTTGAGCCACCCCAGAAACTACTTTGCTGGCTTTGCTAAGGTCCGTTCGAA
GGTTGGCTTGTTGTTGGAGTTTGCGGAAACTACTTTTCTCCATCAAACTAGGGTGTAGTC
TGAATTGTTCGGGCTTCCCTTGCATCCTTGTTGAAAACCCTCATGATCTCTCTGTGTTTC
TGTTGTTCTTGTCAACGCTGTCGAAAGTCATTGTGTGCTCTAATATATTCATCCATCTTC
TGAAACAGCTTCTTCAAGGTTTGCGGAGGCTTTCAGGTGAAGTATTATGAGCATGGGTCA
ACTTTGAGCTCCTTGATTGTTGACTTAATGACAATTTTAACTAGTACTCCTTGTGCATGT
ACTTTGACTTAGACAAACCTTCACATATAACTTTGAAGGGATTCATCTACTTCTTGAAAA
CATGGAACAATGCATGTGCCATGACTAGGTTTGTTTGAAAGCCTTGGAAACTTGCAATCG
ATTGTTTCTTAAGTTGTTCCCATGTGGTTATCGATCTGGACAAAGGGATGAGTACTAGGT
TTGAGCTATGCCTTTTGTTGACGGAGGGATGAGTACCAGGTTTGAGCTATGCCTTTTGCG
GCCATAATATGATTTGGCTAACATTGTTGTGTTTCTGCCGAATTATGCAATGGTTGCTTC
GTAACTCATGAGGAATTGCTTTGATTTCGACTGCCCATCATTCAGAGGAAGCATGGACAG
TTTATATGCAGCTTGCCATGGGGCTACCTGCAAATCCCTTGAGAACGAAGATGCACTATC
ATAGATGAAATTACATTTTTACCTTTCCCTATTTCATAGTCACCCTTTGCAATTAAGGGA
GTACAATAATGTCATTTTACTGCGTAGACGTGTCGCACACATCTTCTCTTCGTAGAAGCT
TCTTATGTCTCCTCTCCTTCGAAGTCCTCTTTATCGACGACAAAGCTTTGCTTTCAATGC
CTTCGGCTTCATGCACCTTTGGCTCATTCAGATCTACCGAAGCTTTTTCAAGGAGAGCGG
TGATCTTCCTTTGGCCTTCATTAGCTTTCTGGACCTGAAAAACCATCTAAATATTGATTT
CATCATTTTGGACCTTCGACTAGAGACCTCCCCAACAACAACCAAATAGAAACAATTGCT
GGTTTACAAATGCCATTAAACCCTGGTTAGAGAAGTGCAAATATAATTCTAATGCAGTCT
TAGACATACTTCACGCGAGTGTGAAATGTAACGTTATATACTTGTATACTGACCTTGTTA
CTTAATCATTGTGATGTTTTATAATTTTTTTGTTATGATTTCATGTTTAATAGCTCTGTA
CAGCATGTGTGATGATAACATTGTTACTTCCTGTGATGTTATATCCTCTCTATGTGAGTG
GTGATGGCCTCATGGTAAGTCTACTTCTAGTTCTATGTGTTTACATTATTTTAATTTTGG
CAATCTTCACAATCTAAAAGTCTGTCAGAACAGGTCATGGAAGTCCCTGAAATATCTCCT
ATGTCAGAATACTTGTCCACTCATGATGTTATTCTTTCTGTGGATGGTCTGAAAATAACC
AGAACTGATGATTGGATCAAGATTCTGAACCAAGGTACTACAGCGAAATCTAGGGATCCT
GAATTCCTTGAAGGCTCTCATAGATATGTTGCCACTAGTTCTACCAAGGGTTATTGCGTG
CCCGATTCATGGATAGATGCAAGCAAAAATCTCTGGCAGATAAGAGACAAGCTGCCTTGC
CCAGATGAACTGATAGCCTTCGAAAAAGTTATCTGTAACGTCTCAACCATTTTGACAGAG
AAGACTAGCATAGGTAGTGACCAGAAGGAAGTTGAGGGAAAATATTGTTTGATTGCGAAA
GATGTAGTAAAGCTTAGAAGATGTGGAAACGGATGGCACATGACTGAAGATGATGAAAGT
AGCTGTGCATGTTTTGAGGATGAGCACTGTTTGGTACCTGTTCTGAACCCAGGCTTTTCA
TGGATTGAGGTCTCCTATGCCAGGCCATACTCTTTGAGATGTTTACAAAAAGGAGGAAAT
TTGTTATCATCACATACTGCAAATAGTAACTTTGGACAGAGTCCTTGTGAAGGATCTTTT
GTTTATGTGGGTGATCTGTCATCAGCAGCACGTTCGGTTAGGTTATCCCGCTACCGACCT
CGATGGGCACTTCTACTTTTCATTGCAGACATCCCATATATCTTGGAAAATGGTTTAAGT
AGCTTGCTTCATGCATCTGCAGCATTGGCTGTAATCAATTGCCTACCGGTGTATTTTCTG
GATGGTGAAGCGATTCTGGAGACTACCTTAAGCTATGTAGCTTGGTTTACCCCAAGACTG
CAACGCAGAATTCTAAAAGTATGCAGCGTGGTGTGGACGGGTTTATTAGTCATTACTTTC
TCAAGTATTTGTTATTCCACAGTGCTACATTATGGCGTATAGCAAATAA