Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d044016_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:216679147:216698259:-1 gene:Zm00001d044016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 5
Sequence	ATGCAGAACGTGGTGGAGGTCGAGCCGGGCCGCCCGGCTGCCGATGGCCGGCCATCCGTG GGGCCCACCTACCGGAGCGCCTTCGCCCGCGACGGATTCCCGCCGCCCGTCCCCGGGATG GACAGCTGCTACGACATCTTCCGCATGGCCGTGGAGAAGTATCCAAACAACAGAATGCTT GGCCATCGTGAGATTGTTGATGGGAAGGCTGGTGCATATACTTGGAAGACATATAAGGAG GTGTTTGACATTGCAAACAAAATTGGTAACTCTATTAGGAGCTGTGGACTTGCGAAGGGT AGTCGTTGTGGTATCTATGGTGCTAATTGTCCTGAATGGATTATCACAATGGAGGCTTGC AACGCCCATGGAATCTACTGTGTTCCATTATATGACACACTTGGAGCTGGTGCGGTAGAG TTTATTCTGTGTCATGCAGAAGTTGAGATTGCTTTTGCGGAGGAAAAGAAAATTGATCTG CTCGTGAAGACTTTACCTAAGTCAAATGAGTTCTTAAAAACGATCATAAGTTTCGGCAAG GTAACTCAAGAACAGAAGGGAGAAGTCCAAAAATATGGGCTATCAATTTACTCGTGGGAT GAATTTCTGTCCCTGGCGGCTGACCAAGAATTTGATCTTCCAGTCAAGGAGAAGGCAGAC ATATGCACTATAATGTATACTAGTGGAACTACTGGTGACCCAAAAGGAGTACTGATATCA AATGCTAGCATTATTTGTCTCATTGCAGGTGTGGACCGGTTGCTTAACTATGTAAACGAA GAGTTGGCAGAAAGCGACGTTTACATGTCTTACCTTCCTCTTGCACACATCTTTGATCGC GTTGTGGAGGAATTGTTTATTTTCCATGGTGCCTCTATTGGATTCTGGCAAGGGGATGTT AAGCTACTAGTTGAAGATATAGGTGTGTTGAAACCAACAATTATGTGTGCTGTTCCTCGT GTTCTTGATCGGATATTCTCCGGGCTACAAGCTAAAATTTCCTCTGGTGGGTTTTTAAAG AGTACAGTGTTTAATCTTGCTTACAGATTCAAGCAGTTTAGAATGATGAGCGGAGCTAAG CACAATGAAGCTGCTTCCATATGTGACAAAGTAGTTTTTAGTAAGGTGAAAGAGGGTCTT GGTGGAAATGTTAGAGTTATTTTATCTGGAGCTGCTCCACTTGCTACCCATGTTGAAGAA TACTTGCGTGTGGTCACATGTGCACATGTCGTACAAGGATATGGCCTCACGGAAACTTGT GCTGGATCTTTCGTCTCGCTACCAAATCAAATGTCCATGATAGGAACTGTTGGCCCCCCA GTGCCAAACATCGATGTTCGTCTGGAGTCGGTCCCAGAAATGGGTTATGATGCACTTGCG AGCAAACCTCGTGGAGAGATATGCATCAGGGGAGAAACATTATTCTCAGGATACTACAAG CGTGAAGACCTTACAAAGGAGGTCCTCATTGATGGATGGTTCCACACTGGTGACATTGGT GAGTGGCAACCTGATGGATCTATGAAAATCATAGACCGTAAAAAGAATATATTCAAACTT TCACAGGGTGAATATGTGGCAGTTGAAAATTTGGAGAATGTTTATGGTCTTGTTTCTGCT ATAGACTCGATATGGATATATGGGAACAGCTTTGAGTCCTTTCTTGTTGCTGTGGTCAAT CCCAACAAGGAGGTTCTCGAGAGTTGGGCTGCAGCAAATGGAATAAGTGGTGATTTCGAG TCCTTGTGCAATAATCCAAGAACAAAAGAATACATTTTAGGAGAGCTGTCAAGAATAGGA AAAGAGAAGAGGCTCAAAGGTTTTGAATTCGTAAAGGATGTGCACCTGGAACCAGTACCG TTTGACATGGACCGTGATTTGATCACCCCGACATACAAAAAGAAGCGTCCGCAACTGCTC AAGTACTACCAGGGCGTGATTGACAACATGTACAAAAGTGCTAAGTGA

Peptide Sequence

PEP ID	Zm00001d044016_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:216679147:216698259:-1 gene:Zm00001d044016 transcript:Zm00001d044016_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 5
Sequence	MQNVVEVEPGRPAADGRPSVGPTYRSAFARDGFPPPVPGMDSCYDIFRMAVEKYPNNRML GHREIVDGKAGAYTWKTYKEVFDIANKIGNSIRSCGLAKGSRCGIYGANCPEWIITMEAC NAHGIYCVPLYDTLGAGAVEFILCHAEVEIAFAEEKKIDLLVKTLPKSNEFLKTIISFGK VTQEQKGEVQKYGLSIYSWDEFLSLAADQEFDLPVKEKADICTIMYTSGTTGDPKGVLIS NASIICLIAGVDRLLNYVNEELAESDVYMSYLPLAHIFDRVVEELFIFHGASIGFWQGDV KLLVEDIGVLKPTIMCAVPRVLDRIFSGLQAKISSGGFLKSTVFNLAYRFKQFRMMSGAK HNEAASICDKVVFSKVKEGLGGNVRVILSGAAPLATHVEEYLRVVTCAHVVQGYGLTETC AGSFVSLPNQMSMIGTVGPPVPNIDVRLESVPEMGYDALASKPRGEICIRGETLFSGYYK REDLTKEVLIDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLENVYGLVSA IDSIWIYGNSFESFLVAVVNPNKEVLESWAAANGISGDFESLCNNPRTKEYILGELSRIG KEKRLKGFEFVKDVHLEPVPFDMDRDLITPTYKKKRPQLLKYYQGVIDNMYKSAK

Transcript Sequence

Transcript ID	Zm00001d044016_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:216679147:216698259:-1 gene:Zm00001d044016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 5
Sequence	AGCGTCCAGCAATCGGAGTCCCCCACTCGCTCGTGCTCGTGAGCGAACGGAGTCCAAGGC AGACGCTGCGATTCACAAGCGCCGAGGAGCGAGATGCAGAACGTGGTGGAGGTCGAGCCG GGCCGCCCGGCTGCCGATGGCCGGCCATCCGTGGGGCCCACCTACCGGAGCGCCTTCGCC CGCGACGGATTCCCGCCGCCCGTCCCCGGGATGGACAGCTGCTACGACATCTTCCGCATG GCCGTGGAGAAGTATCCAAACAACAGAATGCTTGGCCATCGTGAGATTGTTGATGGGAAG GCTGGTGCATATACTTGGAAGACATATAAGGAGGTGTTTGACATTGCAAACAAAATTGGT AACTCTATTAGGAGCTGTGGACTTGCGAAGGGTAGTCGTTGTGGTATCTATGGTGCTAAT TGTCCTGAATGGATTATCACAATGGAGGCTTGCAACGCCCATGGAATCTACTGTGTTCCA TTATATGACACACTTGGAGCTGGTGCGGTAGAGTTTATTCTGTGTCATGCAGAAGTTGAG ATTGCTTTTGCGGAGGAAAAGAAAATTGATCTGCTCGTGAAGACTTTACCTAAGTCAAAT GAGTTCTTAAAAACGATCATAAGTTTCGGCAAGGTAACTCAAGAACAGAAGGGAGAAGTC CAAAAATATGGGCTATCAATTTACTCGTGGGATGAATTTCTGTCCCTGGCGGCTGACCAA GAATTTGATCTTCCAGTCAAGGAGAAGGCAGACATATGCACTATAATGTATACTAGTGGA ACTACTGGTGACCCAAAAGGAGTACTGATATCAAATGCTAGCATTATTTGTCTCATTGCA GGTGTGGACCGGTTGCTTAACTATGTAAACGAAGAGTTGGCAGAAAGCGACGTTTACATG TCTTACCTTCCTCTTGCACACATCTTTGATCGCGTTGTGGAGGAATTGTTTATTTTCCAT GGTGCCTCTATTGGATTCTGGCAAGGGGATGTTAAGCTACTAGTTGAAGATATAGGTGTG TTGAAACCAACAATTATGTGTGCTGTTCCTCGTGTTCTTGATCGGATATTCTCCGGGCTA CAAGCTAAAATTTCCTCTGGTGGGTTTTTAAAGAGTACAGTGTTTAATCTTGCTTACAGA TTCAAGCAGTTTAGAATGATGAGCGGAGCTAAGCACAATGAAGCTGCTTCCATATGTGAC AAAGTAGTTTTTAGTAAGGTGAAAGAGGGTCTTGGTGGAAATGTTAGAGTTATTTTATCT GGAGCTGCTCCACTTGCTACCCATGTTGAAGAATACTTGCGTGTGGTCACATGTGCACAT GTCGTACAAGGATATGGCCTCACGGAAACTTGTGCTGGATCTTTCGTCTCGCTACCAAAT CAAATGTCCATGATAGGAACTGTTGGCCCCCCAGTGCCAAACATCGATGTTCGTCTGGAG TCGGTCCCAGAAATGGGTTATGATGCACTTGCGAGCAAACCTCGTGGAGAGATATGCATC AGGGGAGAAACATTATTCTCAGGATACTACAAGCGTGAAGACCTTACAAAGGAGGTCCTC ATTGATGGATGGTTCCACACTGGTGACATTGGTGAGTGGCAACCTGATGGATCTATGAAA ATCATAGACCGTAAAAAGAATATATTCAAACTTTCACAGGGTGAATATGTGGCAGTTGAA AATTTGGAGAATGTTTATGGTCTTGTTTCTGCTATAGACTCGATATGGATATATGGGAAC AGCTTTGAGTCCTTTCTTGTTGCTGTGGTCAATCCCAACAAGGAGGTTCTCGAGAGTTGG GCTGCAGCAAATGGAATAAGTGGTGATTTCGAGTCCTTGTGCAATAATCCAAGAACAAAA GAATACATTTTAGGAGAGCTGTCAAGAATAGGAAAAGAGAAGAGGCTCAAAGGTTTTGAA TTCGTAAAGGATGTGCACCTGGAACCAGTACCGTTTGACATGGACCGTGATTTGATCACC CCGACATACAAAAAGAAGCGTCCGCAACTGCTCAAGTACTACCAGGGCGTGATTGACAAC ATGTACAAAAGTGCTAAGTGAACTCACTCTACAGTACACATCCCGATGAAGATTCCCAAC GTTGAATCTTGTTTGAGCAGCCAGAAGTTCTGCTTTGTATATGCTCGTAGTTTGTATGCG AGAATTCTTTCCTGTATCAGTTTTTTCAGAAACGATTTGCCTTGGGCATATATATAGCAA AACCGGCAATGTGGCCAGCAGCCAAGTGGAGACACCGTTTCAAATTGATTGAACTATGGC GAATACTGATTGACAGAAGGGTTAGGGCATGCTTGGTACCTTTACCAGGTACTATTCTAC CTGGCCGAGCAAATTGATTAAGGCCAACTGTTTGGATCCAATTTAGGCCTTCTTTGAAAT GTGGGATTTTTTTCCCATTTCCTATGTATTTCCTGTGAAAATAAACTGATTCCTATAAAA TTCCTTTACGACTCATCTAATTTTTTT