Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043997_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:3:216108823:216119782:1 gene:Zm00001d043997 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting protein 25

Sequence

ATGCAGAGGCTGGGGGATTTCAGGCTCCCTCCCTTCTTCAACTACCCGCCTTACTTCACT
TTACAGCCTGTGCGTGAGACGCGGGAAAAGCAAGTGCAGTTATGGAAGGATCTGATACTT
GATTACTGTAGAAGTCAAAAGATACATACAATATCTCTAGAAGAAGATTTCCCCTTGTTC
TCCAATGCAAAGATTGAGAGATCTCTTAGCTACGAAGCAAAGGAAGTGTTCCTCGCAGCT
CTCGTCAGTGAAGGTCGTGCAGAATGGATGGACAAAGGTCACAAGAAGTGCCTAATTCTT
TGGCTAAGGATACAGGATTGGGCAAATTTCATATTGAACTTTGTAAGGTAA

Peptide Sequence

PEP ID

Zm00001d043997_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:3:216108823:216119782:1 gene:Zm00001d043997 transcript:Zm00001d043997_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting protein 25

Sequence

MQRLGDFRLPPFFNYPPYFTLQPVRETREKQVQLWKDLILDYCRSQKIHTISLEEDFPLF
SNAKIERSLSYEAKEVFLAALVSEGRAEWMDKGHKKCLILWLRIQDWANFILNFVR

Transcript Sequence

Transcript ID

Zm00001d043997_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:216108823:216119782:1 gene:Zm00001d043997 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting protein 25

Sequence

ATTGTGAGCAGTTCTTCCGTAGGCAGCGCTCAGTCGCCGGCACCTGTTCTGGTTGCTGGG
GCACCTCCCGCGCCGCCCCCTAGGACAACTTCTCTTTTGGCCCTCGAGGCAACTCTTCAG
ACCCCTGGGGCACCTCGTGCTCCTTGAGGCACCTCCGTGTGCCGGCCCCCAAACATTTGT
TCTGCCGCTATGGAGCACCTCTTGTGTCGACCCCTAGGGCAACTCTTCTAGCCCCCGGGG
CACTTGTTTCGCCCCTCGAGGCACCTCATGCCTCGGTCCCTGGGACACCTCCTGTGTTGC
CCCCTAGGCCATCTCTTCCTACCTATGGGGCAACTCTTTAGACCCTCGAGGCACGTATTC
CGCCCCAGGGCACCTGTGCTTTGGGAACTTCCCATTGGGGTCTCTTGTAGGCGTGCACTG
CATAGCGCCACCGTCACTGACCGTCTCCACTGGTCATCGTTGCGACCACTCTTAGGTCTC
GACACCTGCTAAACTACACCATGGTATCTAGGTGGTTGTGCACATGCAACTCCATCGTTT
GGATGGTGCCCGTCTAAGATCCACGTCTCCATTGGAACATCGACATCTGCATCCATGGCC
ACCAACACAGCTCGGGAAAATTGCTTTTTTAGGTCACACTGCTGCTCACCAAAATACCCC
GGCATTCGTTGCACTCGTTAGAATTAATATATATGCTCTTGTGCTAGGATAGTATAGATG
AGCCTTTAGACTTCTAGATAGTCCGCTGTTGCTGACAAGCTAGCTAGCAGCAGTAGTCGG
CCACCAATAGTTGCCAGGCACTGTAGCAACCGGACAGCTCTAGCAAAGGTGGTTACTGTA
GCTAGTCAGATAGTAGGTCTTGTTAGTATGAATAATATAGTTTGTGTAATACACTGGCTG
CTCACTATTTATTTTTTGCTGATTTTTCTCTCATATTTACTTGGATTTTTTATACCTTTC
TTATTTCCATGATTCTTTTTAGTTTCGTTAGTTTTTTATTTAGCGCAGCAGCTCTTTCTT
TGTATGGATTGTTTCATTAGTTGTCAACTTACAAAGCACTCTGCTTGTTTGGTTATGAGC
AGAACAGAAAACGTGGGGGGTGGGAATGGTTTCTCGATGGTAACCACAGTTTGGCCAATG
GTTTGGTACATTTCAGGTTCCAGCTGAAGTAACATTAAAATCCGGTGCGACTTGTTTTCT
GTACATGGTGACTGGGTTGGGGTGGGTTGTTTTTTTGTTGTTGAATGTTAGTATAGATTG
GCATGGTTACGGTTTGGATTTCAGTCCACTAGCGGGGCTAGACGCAATCCTAAGTCCCCT
TCCAGTCCAGTCCACCACAGCACACCGTAGCCATTGCCTTCCTCACCTTATGCCTTACAT
CTGCTGGTGCAGGAGTGCAAATCCGTCAGCATTGGACTGTTTTACTCATCTATAGGATCT
GATTTTGGGTGGGCGCAGTTGCGGAGATGCAGAGGCTGGGGGATTTCAGGCTCCCTCCCT
TCTTCAACTACCCGCCTTACTTCACTTTACAGCCTGTGCGTGAGACGCGGGAAAAGCAAG
TGCAGTTATGGAAGGATCTGATACTTGATTACTGTAGAAGTCAAAAGATACATACAATAT
CTCTAGAAGAAGATTTCCCCTTGTTCTCCAATGCAAAGATTGAGAGATCTCTTAGCTACG
AAGCAAAGGAAGTGTTCCTCGCAGCTCTCGTCAGTGAAGGTCGTGCAGAATGGATGGACA
AAGGTCACAAGAAGTGCCTAATTCTTTGGCTAAGGATACAGGATTGGGCAAATTTCATAT
TGAACTTTGTAAGGTAAAGGATAACGGGTTGGAAGTAATGACTATCGAAGAAATACGCTC
TGGAATTGATACACGTGGAACTGAACTCGAGGGAATTGATCGTGGTGTTCTCATGCGGGC
TCTGCGGCAGTTGGAGCAAAAGGGAAAGGCAGCTATCTTCAAAGGCACCTCTGCTGATGA
CGAAGGCGTAAAGTTTTCGGTGTAATTCTTTTGCGATCCTTAAACTGGCAGACTAATAAT
CTCGTTCAGCCGGTGCCCTTGAACATGGCATGAGACACCCATAGCCTCGATCATTCAGTG
CCCTTTGAAAATGGCATGACACATCCTTGTAAAAAGCAGTAGGGCTGATCACATTCTTCC
CGAGTAGTATCCTCTTCAGTGCTGCGGTAAAATTTCCCAACTCATCTTTTGTTGTAGTGA
AAAATCGGCCAAGCCTGATTAAACATTGTGGAGTGGTTGGTAAGAAGAAGTTGAACTG