Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043994_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:215948160:215950590:-1 gene:Zm00001d043994 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphinganine C4-monooxygenase 1
Sequence	ATGGGGTTCATGGACGCCGAGGAGCTGGTGGTGACGCTGGCGCCGGTGGCCGTGTACTGG GCGTACGCGGGCATGTACGAGGCGCTGCTGGCGCGCACCACGGCGCTGGACAAGTACAGG CTGCACTCGAGGCGGGACGAGGAGACCAAGAACATCGCCTCCCGGAAGGACGTCGTCAGA GGGGTGCTCCTGCAGCAGTGTATCCAGGTCGCCATCTCCGTCGCCGTCCTCAAGCTGGAA GGACACGGACACGGACACGGACACGGACACGGTGCCGCTGCCGACGGTCTCGCCGCGGCG CCGGCGGAGGCGGAGCCGTTCCTGGTGTCGGCGGCGCGGTTCGGCGTGGCGATGCTGGTG CTGGACGCGTGGCAGTACTTCATGCACAGGCTCATGCACTCCGTCCCGTACATGTACCGG CGGTTCCACTCGTGGCACCACCGCGTGGCGGCGCCCTACGCGTACGCGGCGCAGTACGGC CACCCCGTGGACGCCGTGCTCACGGAGACGCTGTCGGGCGCCGCGGCCTACCTGGCCTCC GGCATGTCCCCGCGCGTCGCCGCGGCCTTCTTCGTCTTCGCCACCGTCAAGGGCGTCGAC GACCACTGCGGCGTCGCCGCGCCGTGGAACCCGTTCCACGCCGCGTTCCGCAACAACACC GCCTACCACGACGTGCACCACCAGCGCGGCGGCGGCCGCCGCAACTTCTCCCAGCCCTTC TTCGTGGTCTGGGACCGCCTGCTCGGCACACACACGCCGTACGCGCTCAGACAGAGGGAC GGCGGCGGCCTCGAGGTCAAGGCCTTCAAGGGTCGTCAGATGCAATAG

Peptide Sequence

PEP ID	Zm00001d043994_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:215948160:215950590:-1 gene:Zm00001d043994 transcript:Zm00001d043994_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphinganine C4-monooxygenase 1
Sequence	MGFMDAEELVVTLAPVAVYWAYAGMYEALLARTTALDKYRLHSRRDEETKNIASRKDVVR GVLLQQCIQVAISVAVLKLEGHGHGHGHGHGAAADGLAAAPAEAEPFLVSAARFGVAMLV LDAWQYFMHRLMHSVPYMYRRFHSWHHRVAAPYAYAAQYGHPVDAVLTETLSGAAAYLAS GMSPRVAAAFFVFATVKGVDDHCGVAAPWNPFHAAFRNNTAYHDVHHQRGGGRRNFSQPF FVVWDRLLGTHTPYALRQRDGGGLEVKAFKGRQMQ

Transcript Sequence

Transcript ID	Zm00001d043994_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:215948160:215950590:-1 gene:Zm00001d043994 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphinganine C4-monooxygenase 1
Sequence	GGTCGATCGAGCGCACAAGCTGTCAAAAAAAATCTGAACACAAGCAGGGCCGGGTTCGCA GGCGCGCGTCGCCGTTGACAGCAACTAGCATATATAGCTAGAGCTAGCTCGATCGATCTG CTGTGCTTACACCACCAGTCCACCGCTTCTCTTGCTTTGCCGGTGTCGTCGGCCAGCGCG CGCGCTAGCGCTATCCGATCCGATCCGGCCGGCCGGCGACCTACCGATGGGGTTCATGGA CGCCGAGGAGCTGGTGGTGACGCTGGCGCCGGTGGCCGTGTACTGGGCGTACGCGGGCAT GTACGAGGCGCTGCTGGCGCGCACCACGGCGCTGGACAAGTACAGGCTGCACTCGAGGCG GGACGAGGAGACCAAGAACATCGCCTCCCGGAAGGACGTCGTCAGAGGGGTGCTCCTGCA GCAGTGTATCCAGGTCGCCATCTCCGTCGCCGTCCTCAAGCTGGAAGGACACGGACACGG ACACGGACACGGACACGGTGCCGCTGCCGACGGTCTCGCCGCGGCGCCGGCGGAGGCGGA GCCGTTCCTGGTGTCGGCGGCGCGGTTCGGCGTGGCGATGCTGGTGCTGGACGCGTGGCA GTACTTCATGCACAGGCTCATGCACTCCGTCCCGTACATGTACCGGCGGTTCCACTCGTG GCACCACCGCGTGGCGGCGCCCTACGCGTACGCGGCGCAGTACGGCCACCCCGTGGACGC CGTGCTCACGGAGACGCTGTCGGGCGCCGCGGCCTACCTGGCCTCCGGCATGTCCCCGCG CGTCGCCGCGGCCTTCTTCGTCTTCGCCACCGTCAAGGGCGTCGACGACCACTGCGGCGT CGCCGCGCCGTGGAACCCGTTCCACGCCGCGTTCCGCAACAACACCGCCTACCACGACGT GCACCACCAGCGCGGCGGCGGCCGCCGCAACTTCTCCCAGCCCTTCTTCGTGGTCTGGGA CCGCCTGCTCGGCACACACACGCCGTACGCGCTCAGACAGAGGGACGGCGGCGGCCTCGA GGTCAAGGCCTTCAAGGGTCGTCAGATGCAATAGTATCTTAATTGTTTTAGGTTG