Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043955_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:214775698:214777826:-1 gene:Zm00001d043955 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit D
Sequence	ATGGGCTTCGACGTGGGCCTCGTCCCCTACAACCCCGACGGGTGGGGTCCACCTGAAGTT GCCGCCGCGCCGCCTTCCCTCGGTGGTGGCTCCTCGTCTGTCCCCTTCGCTCCCTTCTCC CGCTCCGACAAGCTGGGCCGCATCGCCGACTGGACGCGCAACCCGCCGGGCCCCGGGGCT TTCGCCGCAGCTCGCGACGCCGTCTTCGATTTCGCGGGGCTCGAGGACTCCATCGGGCTC GCGTCCGCGGACGACTCGTCCTTCCGCCTCGTCGATGGCAAACCGCCGCCGCGGCACCCG CGGTTTGGACCTCGCTGGCGCTTCCAGCAGCGGCCCCAACTCCCGCAGCGCCGCGACGAA GAGGTCGAGGCTCGGCGTCGCGAGGCCGAGAAGGAGCGCGCCCGCCGCGACCGCCACTGG CAGCAGAACCGCCGCACGCACCACCAGTTCAACCGCGGCGGGCCCTCCTCGTCGTCTGCC AAACCGTCCGTTGACATCCAGCCCGAGTGGTCGGTGAAGGAGCAGATCCCTTTCTCATCC TTCTCCAAGCTCTCCTTCGCCGTCGCCGACCAGCCCGAGGATCTCCTCGTCTGTGGCGCA GTCGAGTACTACGACCGGACCTACGATCGCGTCACCCCCAGGGCCGAGCGTCGCCTCGAG CGCTTCAAGTCGCGGAACTTCTTCAAGGTCACCACTACCGACGACCCCGTCATCCGCCGT CTTGCTGAGAATGACACGGCCACGGTCTTCGCCAATGACACCATCCTGGCCGCACTCATG TGTGCGCCCCGTAGCGTCCAGTCCTGGGATATCGTAATTCAGCGTGTTGGCAACAAGTTG TTCTTCGACAAGCGTGATGGCTCTCAGCTTGATCTTCTCACCGTCAACGAAACCGCCCAG GAGGCACTCCCTGAGGCCAAGGAAGACATCAACTCCGCGCATTCGCTGGCGGTTGAAGCC ACATACGTCAATCAGAACTTCTCGCAGCAGGTGCTGCTCCGCAATGGTGAGAAGGTCACG TTCGACGAGCCTAACCCGTTTGCCACTGAAGGGGAGGAAGCTGCTTCCGTTGCTTACCGC TACCGCCGCTGGAAGCTTGATGAGGAGACAAGCTTGGTTGCTCGGTGCGAGGTTCATGCC GTGAGCGTTGATCTACGCGGCGAGCGCCAGTTCCTTACACTCAACGCCCTCAACGAGTTC GATCCCAAGGTCACTGGTGTTGACTGGAGGAAGAAGCTTGAGACCCAGCGGGGTGCTGTG CTTGCCACTGAGCTCAAGAACAATGCCAACAAGCTTGCACGCTGGACTGCCCAGGCGCTG CTTGCCGGCGCAGACATGATGAAGTTGGGTTATGTGTCACGGCTGCACCCACGCGACCAG TACAACCATTCCATTCTCAGTGTGATCGGGTACAAGCCAAGGGATTTCGCTGCACAGATC AATCTCAACACCGCAAATATGTGGGGGATCGTGAAGTCTATTGTGGATGTCTGCATGAAG CTTGGAGAGGGGAAGTATGTGCTTGTGAAGGACCCAGTGAAACCACAGGTCCGGCTTTAT GAAGTGCCAAATGATGCATTCGAGAATGACTACGTTGAGGAACCACTCCCTGAGGAAGAG CAAGTGCGTCCCTTCTCCGAGGATGTTGATGCCAGCGCGAAGGAAATGGATGCTGCCGCA GAAGCGGAGGCTACTGGAACAACTGCAGGCGCTGAGAAGAGTGGTGATGTCGCTGCTGTG TGA

Peptide Sequence

PEP ID	Zm00001d043955_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:214775698:214777826:-1 gene:Zm00001d043955 transcript:Zm00001d043955_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit D
Sequence	MGFDVGLVPYNPDGWGPPEVAAAPPSLGGGSSSVPFAPFSRSDKLGRIADWTRNPPGPGA FAAARDAVFDFAGLEDSIGLASADDSSFRLVDGKPPPRHPRFGPRWRFQQRPQLPQRRDE EVEARRREAEKERARRDRHWQQNRRTHHQFNRGGPSSSSAKPSVDIQPEWSVKEQIPFSS FSKLSFAVADQPEDLLVCGAVEYYDRTYDRVTPRAERRLERFKSRNFFKVTTTDDPVIRR LAENDTATVFANDTILAALMCAPRSVQSWDIVIQRVGNKLFFDKRDGSQLDLLTVNETAQ EALPEAKEDINSAHSLAVEATYVNQNFSQQVLLRNGEKVTFDEPNPFATEGEEAASVAYR YRRWKLDEETSLVARCEVHAVSVDLRGERQFLTLNALNEFDPKVTGVDWRKKLETQRGAV LATELKNNANKLARWTAQALLAGADMMKLGYVSRLHPRDQYNHSILSVIGYKPRDFAAQI NLNTANMWGIVKSIVDVCMKLGEGKYVLVKDPVKPQVRLYEVPNDAFENDYVEEPLPEEE QVRPFSEDVDASAKEMDAAAEAEATGTTAGAEKSGDVAAV

Transcript Sequence

Transcript ID	Zm00001d043955_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:214775698:214777826:-1 gene:Zm00001d043955 gene_biotype:protein_coding transcript_biotype:protein_coding description:Eukaryotic translation initiation factor 3 subunit D
Sequence	ATGGGCTTCGACGTGGGCCTCGTCCCCTACAACCCCGACGGGTGGGGTCCACCTGAAGTT GCCGCCGCGCCGCCTTCCCTCGGTGGTGGCTCCTCGTCTGTCCCCTTCGCTCCCTTCTCC CGCTCCGACAAGCTGGGCCGCATCGCCGACTGGACGCGCAACCCGCCGGGCCCCGGGGCT TTCGCCGCAGCTCGCGACGCCGTCTTCGATTTCGCGGGGCTCGAGGACTCCATCGGGCTC GCGTCCGCGGACGACTCGTCCTTCCGCCTCGTCGATGGCAAACCGCCGCCGCGGCACCCG CGGTTTGGACCTCGCTGGCGCTTCCAGCAGCGGCCCCAACTCCCGCAGCGCCGCGACGAA GAGGTCGAGGCTCGGCGTCGCGAGGCCGAGAAGGAGCGCGCCCGCCGCGACCGCCACTGG CAGCAGAACCGCCGCACGCACCACCAGTTCAACCGCGGCGGGCCCTCCTCGTCGTCTGCC AAACCGTCCGTTGACATCCAGCCCGAGTGGTCGGTGAAGGAGCAGATCCCTTTCTCATCC TTCTCCAAGCTCTCCTTCGCCGTCGCCGACCAGCCCGAGGATCTCCTCGTCTGTGGCGCA GTCGAGTACTACGACCGGACCTACGATCGCGTCACCCCCAGGGCCGAGCGTCGCCTCGAG CGCTTCAAGTCGCGGAACTTCTTCAAGGTCACCACTACCGACGACCCCGTCATCCGCCGT CTTGCTGAGAATGACACGGCCACGGTCTTCGCCAATGACACCATCCTGGCCGCACTCATG TGTGCGCCCCGTAGCGTCCAGTCCTGGGATATCGTAATTCAGCGTGTTGGCAACAAGTTG TTCTTCGACAAGCGTGATGGCTCTCAGCTTGATCTTCTCACCGTCAACGAAACCGCCCAG GAGGCACTCCCTGAGGCCAAGGAAGACATCAACTCCGCGCATTCGCTGGCGGTTGAAGCC ACATACGTCAATCAGAACTTCTCGCAGCAGGTGCTGCTCCGCAATGGTGAGAAGGTCACG TTCGACGAGCCTAACCCGTTTGCCACTGAAGGGGAGGAAGCTGCTTCCGTTGCTTACCGC TACCGCCGCTGGAAGCTTGATGAGGAGACAAGCTTGGTTGCTCGGTGCGAGGTTCATGCC GTGAGCGTTGATCTACGCGGCGAGCGCCAGTTCCTTACACTCAACGCCCTCAACGAGTTC GATCCCAAGGTCACTGGTGTTGACTGGAGGAAGAAGCTTGAGACCCAGCGGGGTGCTGTG CTTGCCACTGAGCTCAAGAACAATGCCAACAAGCTTGCACGCTGGACTGCCCAGGCGCTG CTTGCCGGCGCAGACATGATGAAGTTGGGTTATGTGTCACGGCTGCACCCACGCGACCAG TACAACCATTCCATTCTCAGTGTGATCGGGTACAAGCCAAGGGATTTCGCTGCACAGATC AATCTCAACACCGCAAATATGTGGGGGATCGTGAAGTCTATTGTGGATGTCTGCATGAAG CTTGGAGAGGGGAAGTATGTGCTTGTGAAGGACCCAGTGAAACCACAGGTCCGGCTTTAT GAAGTGCCAAATGATGCATTCGAGAATGACTACGTTGAGGAACCACTCCCTGAGGAAGAG CAAGTGCGTCCCTTCTCCGAGGATGTTGATGCCAGCGCGAAGGAAATGGATGCTGCCGCA GAAGCGGAGGCTACTGGAACAACTGCAGGCGCTGAGAAGAGTGGTGATGTCGCTGCTGTG TGAAGGCGGTGGCTACAACCTGAAGAGGTCTTTTTCGGACCTTGAATAAGGTTACCTTGG CTAGCTATCTACTACAATCATGGGCATCTGGATACAGGTTTGATGTTTCTACCATCGAAG GTTATGCTATTATTGTTCGCTGAATCTTGAGTTGTGTTCCCTTTATGTGTCCTTATGGCT GGACTTAAATGGAATCCTCAAACTATATTGCACTTTCCAAGACTCACATGTTGTGGATTG CCAGTTCTGTTTACTGTGATTTGAGTTGTGGTGATTGCATTTGCATTTACTTGGCCATAT TAGTACCTTCAGTTTGTTGGATGAATACATGATGCCATGTGAATATTGCCATTTGTGCAA ATCCATTGTTTCGAATCTGTCCAATACGC