Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043953_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:214751851:214757049:1 gene:Zm00001d043953 gene_biotype:protein_coding transcript_biotype:protein_coding description:SCP1-like small phosphatase 4b
Sequence	ATGGTCAAGTTGCCTGCACTGAGAATGAAGAGGATGTTTCATGGTGATGATTGTGCTAAT GAGTTCAAAATCAGGACCATGAAATCCATGAAAGTTTCACACTTTCATGTCAGCGAGTTA GAGCAGTCAGCTATGTCGAACTTATCAGATAAAACTCCTCAAGATGAGCCAGACCCAACC ATTCAACTTGCTGACCAGGATATTAGGGTAACAGAAGCTTCTGGCTTGCATGATCTGATT GGAGGAAAATCCATGCTCGAGGATTTAACATCCGAAGTGATAGATTCACCAAATTCAGAG GGTGACTCCTCTGCTAATTATGATGACAACAAATCTGTGTTACATGCAGTGAATTATGTT GGCAAAGAGTTTGCAGATGATGGTGTAGATTCTTCATTCCAGAATTTCTGTTTTAGTGAT CATGAGGCGAACTGGGGTTTGAATGAGTGTTGCAGACTGATGGATATTTATAGTCCAGAT GACGATTTCTCTTATTTGCTTGATAGTCCACCTGATCTTCTGCCTAGTTATACTGGATTT TGTGATGAATTTGTATCAATAGATGCATTGATGAATATGAGTAGCAGATGTGGAATCTTC CCACTTATTGAGAGCGCTACGGAAGCCAGTGTTGATAATAAGCCATGCTCATCTGAGGTG GATTTGTGCTTTAATAATTCTGAGGTATTAGAGTGGCTCAACCCTAATCTATTGGAGGGG GATTTACCAGATCTTGTTGATTTTGCTGAGTTAAATTCAAATGCTACCCCTGCAAAAAAA GAGCAATGGACCAGGAATGTTACTCTCGTGCTTGATTTGGATGAAACCCTTGTTCATTCA ACTATGAAGCATTGTGATGACGCTGATTTCACATTTTCTATGTTCTATGATATGAAAGAG CATGTTGTATACGTGAAAAAGAGACCGCATGTCCATATGTTCCTCCAAAGGATGGTTGAA ATGTTTGAGGTAGTGATATTTACTGCCAGTCAAAGTGTTTATGCAGACCAGTTGCTTGAC ATGCTGGATCCAGAGAAGAAACTTTTCTCCAAGCGTTTCTTCCGGGAATCGTGTTTGATC ACAGACAGCGGCTACAGAAAAGATCTGACTGTTGTTGGAGTCGACCTTGCCAAGGTTGCC ATAATTGACAACACTCCACAGGTTTTTGAGCTGCAAGTGAACAATGGTATACCAATAGAG AGTTGGTATAGCAACCCCTTGGACGAGGCGTTACCTCAGTTGATCCCATTCTTGGAGACC CTCGCTGTAGCAGATGATGTCCGGCCTATCATTGCCAAGAAGTTTGGCAATATAATAGAT AATCGCTAA

Peptide Sequence

PEP ID	Zm00001d043953_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:214751851:214757049:1 gene:Zm00001d043953 transcript:Zm00001d043953_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:SCP1-like small phosphatase 4b
Sequence	MVKLPALRMKRMFHGDDCANEFKIRTMKSMKVSHFHVSELEQSAMSNLSDKTPQDEPDPT IQLADQDIRVTEASGLHDLIGGKSMLEDLTSEVIDSPNSEGDSSANYDDNKSVLHAVNYV GKEFADDGVDSSFQNFCFSDHEANWGLNECCRLMDIYSPDDDFSYLLDSPPDLLPSYTGF CDEFVSIDALMNMSSRCGIFPLIESATEASVDNKPCSSEVDLCFNNSEVLEWLNPNLLEG DLPDLVDFAELNSNATPAKKEQWTRNVTLVLDLDETLVHSTMKHCDDADFTFSMFYDMKE HVVYVKKRPHVHMFLQRMVEMFEVVIFTASQSVYADQLLDMLDPEKKLFSKRFFRESCLI TDSGYRKDLTVVGVDLAKVAIIDNTPQVFELQVNNGIPIESWYSNPLDEALPQLIPFLET LAVADDVRPIIAKKFGNIIDNR

Transcript Sequence

Transcript ID	Zm00001d043953_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:214751851:214757049:1 gene:Zm00001d043953 gene_biotype:protein_coding transcript_biotype:protein_coding description:SCP1-like small phosphatase 4b
Sequence	TTCCACCAGACCCGCACGTTTCTTTAACCGAAGGCACAGCCGCCGCCATTACTTCATCTT CCTCGCAGCGCCGGCGCCCCATCCTGCGGCCCTCGTGATCGGGCTCTCAGCGACGGCGTC AGCGGCTTCCCCTTCCGCCTCTCGCCAGTCGCCTCGCGCCCTCGCCTCCGGCCCTCCACA CACCGGCCTGCGACCTTGCGTGCCTGCCTCTCTCTCTCTCCTCCTTCCGGTGGAACGGCG CCCGGCTGCGCCGCGCGCGCCTTGAGGGTAGCGGGAGCCAACAGCCGCTGCTCCACCAAG GCGGTCGCGCCGCTCGAAGCGTCACCCGTCCGCTTAGCGCGCTGAAGCGCGCGCTTAGTG CCGCTTCTTGGAACCCTAACGGCTGTACCTGGCAAAAAGAGGGCAATTATTGTGTGTGCA ACAGAGCACATGCAGAAAGATCTGATTCAAGTGTGGAAACTTTGTGAGACGGCTATCTTT TTTTTCAAAGTCAGCGTCTTTTCGGTGGATCTGTAGAGGACTTTAATTCTCTGAAGGAGT GCAATGGTCAAGTTGCCTGCACTGAGAATGAAGAGGATGTTTCATGGTGATGATTGTGCT AATGAGTTCAAAATCAGGACCATGAAATCCATGAAAGTTTCACACTTTCATGTCAGCGAG TTAGAGCAGTCAGCTATGTCGAACTTATCAGATAAAACTCCTCAAGATGAGCCAGACCCA ACCATTCAACTTGCTGACCAGGATATTAGGGTAACAGAAGCTTCTGGCTTGCATGATCTG ATTGGAGGAAAATCCATGCTCGAGGATTTAACATCCGAAGTGATAGATTCACCAAATTCA GAGGGTGACTCCTCTGCTAATTATGATGACAACAAATCTGTGTTACATGCAGTGAATTAT GTTGGCAAAGAGTTTGCAGATGATGGTGTAGATTCTTCATTCCAGAATTTCTGTTTTAGT GATCATGAGGCGAACTGGGGTTTGAATGAGTGTTGCAGACTGATGGATATTTATAGTCCA GATGACGATTTCTCTTATTTGCTTGATAGTCCACCTGATCTTCTGCCTAGTTATACTGGA TTTTGTGATGAATTTGTATCAATAGATGCATTGATGAATATGAGTAGCAGATGTGGAATC TTCCCACTTATTGAGAGCGCTACGGAAGCCAGTGTTGATAATAAGCCATGCTCATCTGAG GTGGATTTGTGCTTTAATAATTCTGAGGTATTAGAGTGGCTCAACCCTAATCTATTGGAG GGGGATTTACCAGATCTTGTTGATTTTGCTGAGTTAAATTCAAATGCTACCCCTGCAAAA AAAGAGCAATGGACCAGGAATGTTACTCTCGTGCTTGATTTGGATGAAACCCTTGTTCAT TCAACTATGAAGCATTGTGATGACGCTGATTTCACATTTTCTATGTTCTATGATATGAAA GAGCATGTTGTATACGTGAAAAAGAGACCGCATGTCCATATGTTCCTCCAAAGGATGGTT GAAATGTTTGAGGTAGTGATATTTACTGCCAGTCAAAGTGTTTATGCAGACCAGTTGCTT GACATGCTGGATCCAGAGAAGAAACTTTTCTCCAAGCGTTTCTTCCGGGAATCGTGTTTG ATCACAGACAGCGGCTACAGAAAAGATCTGACTGTTGTTGGAGTCGACCTTGCCAAGGTT GCCATAATTGACAACACTCCACAGGTTTTTGAGCTGCAAGTGAACAATGGTATACCAATA GAGAGTTGGTATAGCAACCCCTTGGACGAGGCGTTACCTCAGTTGATCCCATTCTTGGAG ACCCTCGCTGTAGCAGATGATGTCCGGCCTATCATTGCCAAGAAGTTTGGCAATATAATA GATAATCGCTAAGGTTCTTAAATAAGTATAGGGTTAGTCTTGTTTACTGGAAGAACCTAG ATGACATCTTTAACTGGTCAAGGTGGGGGCATTTTTCTCTTAAGGGCTAGTTTGGGAACC CTATTTTCCTAAGTTTTTTTTTTCCATTTTCCCAAGTAAAATTAGTTCATTTTTTCTTGG GAAAATATAAATCCCTTGGAAAATGAAGTTCTCAAACCAACTCTAAGGGCTAGTTTGGGA GTCACTTCCGGTTTTGTGGCTCCCAAACTAGCCCTAAAAGGCAGGTTGGCCCGTAGGAAT TAAGAGTAGGAACTATTCCTTAGAAGAACTGTACATATCCTAA