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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043929_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:214131859:214132767:1 gene:Zm00001d043929 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fasciclin-like arabinogalactan protein 6
Sequence

ATGGCGAGGCGCATCGCCGTGGCGGCAGCGTTCCTGGCGCTGGCCGTGGTGGCTCCCGCC
GCGCTGGCGCAGGCTCCCGGGCCCGCGGCGACGCCTAGCGGGCCGCCGAACGTGACGGCG
ATCCTGGAGAAGGGCGGGCAGTTCACCATGTTCATGCGGCTGATGAAGGAGACGCAGCAG
GACACGCAGCTGAACAGCCAGCTGAACAGCTCGTACGCCAGCAGCGGCGGCGGGTACACG
GTGTTCGCGCCCACCGACAACGCCTTCAACAACCTCAAGCCCGGCACGCTCAACTCGCTG
ACGCAGCAGCAGCAGGTGGCGCTGGTGCAGGGCCACGTCCTGCCCCAGTTCTACAGCATG
GACTCCTTCCAGACCGCCAGCAACCCCGTCCGCACCCAGGCCTCCGGCCGCGACGGGCCC
TACACGCTCAACATCACCGCCACCGCCAACAACCAGGTCAACGTCTCCTCGGGCGTCGCC
GAGGTCACCATCAACAACGCGCTCAGCGCCGTCAAGCCCCTCGCCGTCTACTCCGTCGAC
AAGGTGCTCCTGCCCCTGGAGCTGTTCGGGGCCAAGGCGCCCGCCGCCGCGCCCGCCGCG
TCCCAGGGGAAGCCCAAGAAGGGCGGGTCCTCGGACGCTCCCTCCGGGTCGGCCGGTTCC
GACGACGCCGCGCCCACGGGCGCCGCCGGCGCCAGGGTCGTCGGCTGGAGCTTCGCCGGC
CTCGCCGCCGTCCTTGGCTGTCTGTTGTGA

Peptide Sequence

PEP ID

Zm00001d043929_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:214131859:214132767:1 gene:Zm00001d043929 transcript:Zm00001d043929_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fasciclin-like arabinogalactan protein 6
Sequence

MARRIAVAAAFLALAVVAPAALAQAPGPAATPSGPPNVTAILEKGGQFTMFMRLMKETQQ
DTQLNSQLNSSYASSGGGYTVFAPTDNAFNNLKPGTLNSLTQQQQVALVQGHVLPQFYSM
DSFQTASNPVRTQASGRDGPYTLNITATANNQVNVSSGVAEVTINNALSAVKPLAVYSVD
KVLLPLELFGAKAPAAAPAASQGKPKKGGSSDAPSGSAGSDDAAPTGAAGARVVGWSFAG
LAAVLGCLL

Transcript Sequence

Transcript ID

Zm00001d043929_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:214131859:214132767:1 gene:Zm00001d043929 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fasciclin-like arabinogalactan protein 6
Sequence

CCCCGCCCCCGCTTTCAGCCGAGCCCCTATATCAACCAACCCCACCACTCTCTACCCTCT
GTACCCATCGCTCACTACGCGACCGCTAGCTACTCCGATCGGATCCTGACCACGCCCGCC
TACCAGGCCACCACCACCACCACCACCCACAAATCCCCAATGGCGAGGCGCATCGCCGTG
GCGGCAGCGTTCCTGGCGCTGGCCGTGGTGGCTCCCGCCGCGCTGGCGCAGGCTCCCGGG
CCCGCGGCGACGCCTAGCGGGCCGCCGAACGTGACGGCGATCCTGGAGAAGGGCGGGCAG
TTCACCATGTTCATGCGGCTGATGAAGGAGACGCAGCAGGACACGCAGCTGAACAGCCAG
CTGAACAGCTCGTACGCCAGCAGCGGCGGCGGGTACACGGTGTTCGCGCCCACCGACAAC
GCCTTCAACAACCTCAAGCCCGGCACGCTCAACTCGCTGACGCAGCAGCAGCAGGTGGCG
CTGGTGCAGGGCCACGTCCTGCCCCAGTTCTACAGCATGGACTCCTTCCAGACCGCCAGC
AACCCCGTCCGCACCCAGGCCTCCGGCCGCGACGGGCCCTACACGCTCAACATCACCGCC
ACCGCCAACAACCAGGTCAACGTCTCCTCGGGCGTCGCCGAGGTCACCATCAACAACGCG
CTCAGCGCCGTCAAGCCCCTCGCCGTCTACTCCGTCGACAAGGTGCTCCTGCCCCTGGAG
CTGTTCGGGGCCAAGGCGCCCGCCGCCGCGCCCGCCGCGTCCCAGGGGAAGCCCAAGAAG
GGCGGGTCCTCGGACGCTCCCTCCGGGTCGGCCGGTTCCGACGACGCCGCGCCCACGGGC
GCCGCCGGCGCCAGGGTCGTCGGCTGGAGCTTCGCCGGCCTCGCCGCCGTCCTTGGCTGT
CTGTTGTGA