Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043922_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:3:213879640:213887358:1 gene:Zm00001d043922 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 12 description:Auxin response factor 3
Sequence	ATGGCGGGCATCGACCTCAACACCGTGGAGGAGGAGGACGAGGAGGAGGCGGAGGCGCTG CCTTTGCCCGGACCCGGTGGCCGTGGCGCCGTGTGCCTGGAGCTGTGGCACGCGTGCGCG GGCCCCGTCCCGCCGCTGCCGCGGAAGGGCAGCGCCGTCGTGTACCTGCCGCAGGGCCAC CTCGAGCACATCGGCGGCGACGCGGCGCGAGGAGCAGCAGCTTCGGCGGTGCCGCCGCAC GTGCTCTGCCGCGTCGTCGACGTCACCCTCCACCCGCTCGCACGGACGCCGCACATGTTC TGCAAGACGCTCACGGCATCCGATACCAGCACGCACGGCGGTTTCTCAGTGCCGCGCCGC GCCGCCGAGGACTGCTTCCCGCCGCTGGACTACAGCCAGCAGAGGCCGTCTCAGGAGCTC GTGGCCAAGGATCTACACGGCACGGAGTGGAAGTTCCGGCATATCTATCGAGGTCAGCCA CGAAGGCATCTCTTAACCACTGGATGGAGTGCATTTGTTAATAGGAAGAAGCTCATTTCT GGAGATGCAGTTCTCTTCCTTCGAGGCGAAGATGGAGTGCTTCGACTGGGAGTGCGCCGA GCAGCCCAGCTAAAAATTGTAACTCCTATTCCTGCACCTCATAACCAGTGCTCAAGTAAT AGCAATCTTGGAAACGTTGCACAAGCTGTGGCCACGAAGACTGTTTTCCACATCTACTAC AATCCCAGGTTAACTCAATCTGAATTCATTGTACCCTATTGGAAGTTCACAAGAAGCTTC AATCAACCAATTTCTGTTGGAATGAGGTGCAGAATGCGATATGAAAGTGACGATGCTTCT GAAAGAAGGTGCACTGGTATAATAATTGGAAGCAGAGAAGCTGATCCTATATGGTATGGT TCGAAATGGAAATGCTTGGTGGTTAGATGGGATGATGGTATAGAGTGCCGTTGGCCCAAT AGGGTATCTCCTTGGGAGATTGAGCTCACAGGATCTGTTTCAGGATCTCAAATGTGCGCT CCCAGTTCAAAACGTCTGAAACCATGCCTCCCCCAAGTTAATCCGGAGATTGTGCTTCCA AATGGAAGTGTTTCTTCAGATTTTGCGGGATCTGCCAGATTCCACAAGGTCTTGCAAGGT CAAGAATTGTTGGGTTTCAAAACCCATGATGGTCCTGCTATTTCTGCTTCTCAGGCAACT GAAGCAAGAAATTTGCAGTACAGTGATGAACGGAGTAACAATAACTTAGGGATCCCAAGA CTTGGTGTTAGGTCTCCAACTGGAATCCCTGGGTTTCCCTACCATTGCTCAGGCTTTGGG GAATCTCAAAGATTCCAAAAGGTCTTGCAAGGTCAAGAAGTGTTTCATCCTTTCCGAGGA GGATGTTTGGCTGATGGCCATATAAGAACTGCTGGCATGTATCAACCTGACGGTAGGCAT GTATCTGGTGCAGCTTATAAATGGTCTGCACCACAAGGGTATGATTTCCCACAGCCAGCA AAACCGGTTTTTCTGTTGCAAGAATCATCCCCATCATCTGTGATGATGTTTCCACAAACT AGATCTAAGATAACTCACTTGGAATATGAGTACTCAAGACATGAGGATGGTAGACTTGAT AGGACTGTTCCTACTCAAGACATGGGAAGAAGCAATCAAACATTATCTCTTTGGCCTCAT CTTGTTTCAGGCGAAGCAATAGAAGAATGTACTGGAACTGTGAATATGCACTCCCCCGTC AGTGGTGCAGAGCATGAATCAAACAATGAGAGTACAGTTGAAAATGGCTGCAAAATCTTT GGTATCTCATTGGCTGAAAAGATCCGATCATGCGATGAAGCAGACTCTTGTAGTGCAAAA TGTAATTCTCGGCTCCAGCCTTTGAAGTCACAAATGCCAAAATCGCTAGGCAGCTGTTGG GCCACTGTTCACGAGCAAAGGCCTGTTGTTGGCAGGGTGGTTGACGTCTCGGCGACAGAT ATGTGA

Peptide Sequence

PEP ID	Zm00001d043922_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:3:213879640:213887358:1 gene:Zm00001d043922 transcript:Zm00001d043922_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 12 description:Auxin response factor 3
Sequence	MAGIDLNTVEEEDEEEAEALPLPGPGGRGAVCLELWHACAGPVPPLPRKGSAVVYLPQGH LEHIGGDAARGAAASAVPPHVLCRVVDVTLHPLARTPHMFCKTLTASDTSTHGGFSVPRR AAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNRKKLIS GDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQCSSNSNLGNVAQAVATKTVFHIYY NPRLTQSEFIVPYWKFTRSFNQPISVGMRCRMRYESDDASERRCTGIIIGSREADPIWYG SKWKCLVVRWDDGIECRWPNRVSPWEIELTGSVSGSQMCAPSSKRLKPCLPQVNPEIVLP NGSVSSDFAGSARFHKVLQGQELLGFKTHDGPAISASQATEARNLQYSDERSNNNLGIPR LGVRSPTGIPGFPYHCSGFGESQRFQKVLQGQEVFHPFRGGCLADGHIRTAGMYQPDGRH VSGAAYKWSAPQGYDFPQPAKPVFLLQESSPSSVMMFPQTRSKITHLEYEYSRHEDGRLD RTVPTQDMGRSNQTLSLWPHLVSGEAIEECTGTVNMHSPVSGAEHESNNESTVENGCKIF GISLAEKIRSCDEADSCSAKCNSRLQPLKSQMPKSLGSCWATVHEQRPVVGRVVDVSATD M

Transcript Sequence

Transcript ID	Zm00001d043922_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:213879640:213887358:1 gene:Zm00001d043922 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARF-transcription factor 12 description:Auxin response factor 3
Sequence	GCCGACGGGGGCCATGGCGGGCATCGACCTCAACACCGTGGAGGAGGAGGACGAGGAGGA GGCGGAGGCGCTGCCTTTGCCCGGACCCGGTGGCCGTGGCGCCGTGTGCCTGGAGCTGTG GCACGCGTGCGCGGGCCCCGTCCCGCCGCTGCCGCGGAAGGGCAGCGCCGTCGTGTACCT GCCGCAGGGCCACCTCGAGCACATCGGCGGCGACGCGGCGCGAGGAGCAGCAGCTTCGGC GGTGCCGCCGCACGTGCTCTGCCGCGTCGTCGACGTCACCCTCCACCCGCTCGCACGGAC GCCGCACATGTTCTGCAAGACGCTCACGGCATCCGATACCAGCACGCACGGCGGTTTCTC AGTGCCGCGCCGCGCCGCCGAGGACTGCTTCCCGCCGCTGGACTACAGCCAGCAGAGGCC GTCTCAGGAGCTCGTGGCCAAGGATCTACACGGCACGGAGTGGAAGTTCCGGCATATCTA TCGAGGTCAGCCACGAAGGCATCTCTTAACCACTGGATGGAGTGCATTTGTTAATAGGAA GAAGCTCATTTCTGGAGATGCAGTTCTCTTCCTTCGAGGCGAAGATGGAGTGCTTCGACT GGGAGTGCGCCGAGCAGCCCAGCTAAAAATTGTAACTCCTATTCCTGCACCTCATAACCA GTGCTCAAGTAATAGCAATCTTGGAAACGTTGCACAAGCTGTGGCCACGAAGACTGTTTT CCACATCTACTACAATCCCAGGTTAACTCAATCTGAATTCATTGTACCCTATTGGAAGTT CACAAGAAGCTTCAATCAACCAATTTCTGTTGGAATGAGGTGCAGAATGCGATATGAAAG TGACGATGCTTCTGAAAGAAGGTGCACTGGTATAATAATTGGAAGCAGAGAAGCTGATCC TATATGGTATGGTTCGAAATGGAAATGCTTGGTGGTTAGATGGGATGATGGTATAGAGTG CCGTTGGCCCAATAGGGTATCTCCTTGGGAGATTGAGCTCACAGGATCTGTTTCAGGATC TCAAATGTGCGCTCCCAGTTCAAAACGTCTGAAACCATGCCTCCCCCAAGTTAATCCGGA GATTGTGCTTCCAAATGGAAGTGTTTCTTCAGATTTTGCGGGATCTGCCAGATTCCACAA GGTCTTGCAAGGTCAAGAATTGTTGGGTTTCAAAACCCATGATGGTCCTGCTATTTCTGC TTCTCAGGCAACTGAAGCAAGAAATTTGCAGTACAGTGATGAACGGAGTAACAATAACTT AGGGATCCCAAGACTTGGTGTTAGGTCTCCAACTGGAATCCCTGGGTTTCCCTACCATTG CTCAGGCTTTGGGGAATCTCAAAGATTCCAAAAGGTCTTGCAAGGTCAAGAAGTGTTTCA TCCTTTCCGAGGAGGATGTTTGGCTGATGGCCATATAAGAACTGCTGGCATGTATCAACC TGACGGTAGGCATGTATCTGGTGCAGCTTATAAATGGTCTGCACCACAAGGGTATGATTT CCCACAGCCAGCAAAACCGGTTTTTCTGTTGCAAGAATCATCCCCATCATCTGTGATGAT GTTTCCACAAACTAGATCTAAGATAACTCACTTGGAATATGAGTACTCAAGACATGAGGA TGGTAGACTTGATAGGACTGTTCCTACTCAAGACATGGGAAGAAGCAATCAAACATTATC TCTTTGGCCTCATCTTGTTTCAGGCGAAGCAATAGAAGAATGTACTGGAACTGTGAATAT GCACTCCCCCGTCAGTGGTGCAGAGCATGAATCAAACAATGAGAGTACAGTTGAAAATGG CTGCAAAATCTTTGGTATCTCATTGGCTGAAAAGATCCGATCATGCGATGAAGCAGACTC TTGTAGTGCAAAATGTAATTCTCGGCTCCAGCCTTTGAAGTCACAAATGCCAAAATCGCT AGGCAGCTGTTGGGCCACTGTTCACGAGCAAAGGCCTGTTGTTGGCAGGGTGGTTGACGT CTCGGCGACAGATATGTGATCTGATCCACATGGCATATCCTTGTAGAATATGCAGGAAGG ACTACCGAGTGCAACTTTCATGGCCTGAACCACATCCTGGATGAAAGATTGCTGAAGGTG ACCTTATGATTCTTGAAACAGGGATGTTTGACAAATTTGTAATGTACTTTTGGGCTTTAA GTATCTTATTATCTTAAGCTACCTAGTAATCAGCACTTGTACCTTAAGGTGTGCGTTATG GCAAGTTCTTTTAGAGGGCTTGTTTGGACTAGCACCATCTCCCAAGTACTCGTTGCATTG TTTCTTTGCCCCGGGAAACAAGTCCGTTTTGGAAGTTCGGCTCCAGTCCTGTTGGTACCA TTTGTTGCATCGTGTGTGCTTGTACAATTGCACATCTCAAGCGGTAAAGCATGATTTGAC CAGCTAGTTGCTGCCT