Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043909_T029
CDS Infomation	cds chromosome:B73_RefGen_v4:3:213581732:213586248:1 gene:Zm00001d043909 gene_biotype:protein_coding transcript_biotype:protein_coding description:Callose synthase 11
Sequence	ATGCTGCTTGAGATCATAAAGGAGGGGACTGAGGAGCATGGTATTGTTACACAACTGTTC AGCGATTTTGATGGATCCATGAAGATGGAGAAGTTCACTGTGGAGTATAAGATGACTGAG CTGCACAATATCCATACAAGGCTTGTAGCTCTATTGGTCCTCATCCTCAAACCCACCAAA GATGTTACCAAGATAGTTAATGCTTTGCAGACTCTCTATGATGTTGTTGTTCGTGATTTC CAAGCTGAGAAGAGGAGCATGGAACAACTGAGAAGTGAAGGTCTTGCACAGTCAAGGCCC ACCAGGCTTCTCTTTGTGGATGCAGTTGTGCTTCCTGAAGAGGACAATGCTACCTTCTAT AAGCAAGTGAGGCGCATGCACACCATCCTGACCTCCAGAGACTCTATGATTAATGTCCCA CAGAACCTTGAAGCTCGTCGGAGGATTGCCTTTTTCAGCAATTCATTGTTTATGAACATA CCAAGGGCAACCCAGGTTGAGAAGATGATGTCTTTCAGTGTCTTGACGCCTTATTATAAG GAGGAGGTGTTGTACAGCAAGGACCAACTCTATAAAGAGAATGAAGATGGCATCTCAATA TTATACTATCTAAAACAGATTTACCCAGATGAGTGGGAGTACTTCGTAGAGCGAATGAAA CGTGAGGGGATGTCTGATATTAATGAGCTGTACAGTGAGAAGGAAAGGCTGAGGGATCTT CGGCACTGGGTCTCATATAGGGGACAGACATTATCACGTACTGTGAGAGGAATGATGTAC TATTATGAAGCTCTCAAGATGCTGACCTTTTTGGATTCTGCCTCTGAACATGATTTAAAG ACTGGATCAAGGGAGTTAGCTACTATGGGTTCCTCAAGAATTGGATCCTCAAGGCATGAC GGAGTTGCTGGTGGGTCAGGGTATTACAGCAGGGCATCTTCCTCTCATGCATTGAGTAGA GCAAGCAGTAGTGTGAGCTCCTTGTTTAAAGGAAGCGAATATGGGACTGTCCTCATGAAA TACACATATGTAGTTGCATGCCAGGTATATGGACAGCAGAAAGCTAAGAATGACCCCAAT GCTTTTGAAATATTGGAGCTAATGAAAAATTATGAAGCATTACGTGTTGCTTATGTTGAT GAAAGGCAGATCAATGGCAACGAAAAAGAGTTCTTCTCTGTTCTCGTGAAATATGACCAA CAATTGCAGCGGGAGGTTGAAATCTATCGGGTTAAGTTGCCTGGAGAGTTGAAGATTGGC GAAGGAAAGCCAGAAAATCAGAATCATGCACTCATCTTCACAAGGGGCGATGCAGTTCAA ACTATTGATATGAACCAAGACAACTACTTTGAAGAAGCTCTAAAGATGAGAAACCTACTA GAAGAGTTCAATCGTTATTATGGAATTCGCAAGCCTAAAATTCTTGGGGTTCGGGAACAC GTCTTCACGGGTTCAGTTTCTTCTCTTGCTTGGTTCATGTCTGCCCAGGAGACAAGTTTT GTCACTCTGGGGCAGCGTGTTCTGGCTGATCCACTTAAAGTCAGAATGCATTATGGCCAC CCAGATGTTTTTGATCGTCTTTGGTTTTTGGGCCGAGGTGGTATCAGTAAAGCATCAAGA ATAATCAACATTAGTGAGGACATTTTTGCTGGTTTCAACTGTACTCTCCGTGGTGGTAAT GTTACACACCACGAGTATATCCAGGTTGGTAAAGGTAGAGATGTGGGCCTCAACCAGGTC TCTATGTTTGAAGCCAAGGTTGCTAGTGGCAATGGTGAACAAACTTTGAGCCGAGATGTT TACAGGCTGGGCCACCGATTGGATTTCTTCCGGATGCTCTCTTTCTTCTATACAACTGTT GGATTCTATTTCAATACAATGATGGTTGTGCTAACTGTCTATGCATTTGTATGGGGGCGC TTTTACCTTGCACTCAGTGGGCTTGAGGACTACATCAACAAGAACACTTCCTCTTCCAAT AATGCAGCCCTGGGAGCTGTTCTCAATCAGCAGTTCGTCATACAGCTAGGCCTGTTCACA GCTTTACCCATGATTATTGAAAATTCACTTGAGCACGGGTTCCTCACTGCTGTGTGGGAT TTCATGAAAATGCAGCTACAGTTTGCATCTGTTTTCTACACATTCTCCATGGGAACAAAG ACACACTATTATGGGAGGACAATCCTTCACGGAGGAGCGAAATATCGAGCCACTGGCAGA GGTTTTGTTGTGGAGCATAAGAAGTTTGCTGAAAACTATAGGCTCTATGCTCGCAGCCAT TTCATCAAAGCTATAGAACTTGGTGTTATATTAACTCTTTATGCATCTTATGGCAGTGCA TCTGGGAATACATTGGTGTATATTCTGCTGACACTTTCAAGTTGGTTTCTTGTGTCATCA TGGATTCTTGCTCCATTCATTTTTAATCCCTCTGGTTTTGACTGGCTGAAGAATTTTAAT GACTTTGAGGATTTTCTAAACTGGATATGGTTCCGGGGTGGGATCTCAGTTCAGTCAGAT CAAAGCTGGGAGAAGTGGTGGGAGGATGAAACTGATCATCTCCGGACGACAGGTCTATGG GGCTGCATCTTGGAAATCATATTAGACCTTCGATTTTTCTTTTTTCAGTATGCAATTGTA TATCGGCTTCACATTGCTGATAATAGTAGAAGCATCCTTGTCTATCTTCTTTCGTGGACA TGCATCCTCCTAGCTTTTGTGGCTCTTGTGACAGTGGCTTACTTTCGAGACAGATATTCA GCAAAGAAGCACATACGGTATCGCCTTGTCCAGGCAATCATTGTTGGGAGCACTGTGGCT GCTATTGTTGTGCTGTTGGAATTCACAAAGTTTCAGTTTGTTGACACTTTTACTAGTCTT TTGGCTTTTCTGCCGACTGGCTGGGGAATCATATCTATTGCTCTGGTATTCAAGCCATAT CTGAGGAGATCTGAGATGGTCTGGAAAACTGTGGTTACCGTGGCACGTTTGTATGACATA TTGTTTGGAGTAATTGTTATGGCACCTGTGGCTGTATTATCATGGTTGCCTGGGCTTCAG GAAATGCAAACAAGGATCCTGTTCAATGAAGCTTTCAGCAGGGGACTTCACATTTCTCAA ATCATTACTGGCAAAAAGGCACATGTGTTTTGA

Peptide Sequence

PEP ID	Zm00001d043909_P029
PEP Infomation	pep chromosome:B73_RefGen_v4:3:213581732:213586248:1 gene:Zm00001d043909 transcript:Zm00001d043909_T029 gene_biotype:protein_coding transcript_biotype:protein_coding description:Callose synthase 11
Sequence	MLLEIIKEGTEEHGIVTQLFSDFDGSMKMEKFTVEYKMTELHNIHTRLVALLVLILKPTK DVTKIVNALQTLYDVVVRDFQAEKRSMEQLRSEGLAQSRPTRLLFVDAVVLPEEDNATFY KQVRRMHTILTSRDSMINVPQNLEARRRIAFFSNSLFMNIPRATQVEKMMSFSVLTPYYK EEVLYSKDQLYKENEDGISILYYLKQIYPDEWEYFVERMKREGMSDINELYSEKERLRDL RHWVSYRGQTLSRTVRGMMYYYEALKMLTFLDSASEHDLKTGSRELATMGSSRIGSSRHD GVAGGSGYYSRASSSHALSRASSSVSSLFKGSEYGTVLMKYTYVVACQVYGQQKAKNDPN AFEILELMKNYEALRVAYVDERQINGNEKEFFSVLVKYDQQLQREVEIYRVKLPGELKIG EGKPENQNHALIFTRGDAVQTIDMNQDNYFEEALKMRNLLEEFNRYYGIRKPKILGVREH VFTGSVSSLAWFMSAQETSFVTLGQRVLADPLKVRMHYGHPDVFDRLWFLGRGGISKASR IINISEDIFAGFNCTLRGGNVTHHEYIQVGKGRDVGLNQVSMFEAKVASGNGEQTLSRDV YRLGHRLDFFRMLSFFYTTVGFYFNTMMVVLTVYAFVWGRFYLALSGLEDYINKNTSSSN NAALGAVLNQQFVIQLGLFTALPMIIENSLEHGFLTAVWDFMKMQLQFASVFYTFSMGTK THYYGRTILHGGAKYRATGRGFVVEHKKFAENYRLYARSHFIKAIELGVILTLYASYGSA SGNTLVYILLTLSSWFLVSSWILAPFIFNPSGFDWLKNFNDFEDFLNWIWFRGGISVQSD QSWEKWWEDETDHLRTTGLWGCILEIILDLRFFFFQYAIVYRLHIADNSRSILVYLLSWT CILLAFVALVTVAYFRDRYSAKKHIRYRLVQAIIVGSTVAAIVVLLEFTKFQFVDTFTSL LAFLPTGWGIISIALVFKPYLRRSEMVWKTVVTVARLYDILFGVIVMAPVAVLSWLPGLQ EMQTRILFNEAFSRGLHISQIITGKKAHVF

Transcript Sequence

Transcript ID	Zm00001d043909_T029
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:213581732:213586248:1 gene:Zm00001d043909 gene_biotype:protein_coding transcript_biotype:protein_coding description:Callose synthase 11
Sequence	GGATCTGATCGTAGGCTATGGAGGAAGATATGTAAGAATGATTATCGTCGTTGTGCAGTG ATTGAGGTCTATGATAGTGCAAAACACATGCTGCTTGAGATCATAAAGGAGGGGACTGAG GAGCATGGTATTGTTACACAACTGTTCAGCGATTTTGATGGATCCATGAAGATGGAGAAG TTCACTGTGGAGTATAAGATGACTGAGCTGCACAATATCCATACAAGGCTTGTAGCTCTA TTGGTCCTCATCCTCAAACCCACCAAAGATGTTACCAAGATAGTTAATGCTTTGCAGACT CTCTATGATGTTGTTGTTCGTGATTTCCAAGCTGAGAAGAGGAGCATGGAACAACTGAGA AGTGAAGGTCTTGCACAGTCAAGGCCCACCAGGCTTCTCTTTGTGGATGCAGTTGTGCTT CCTGAAGAGGACAATGCTACCTTCTATAAGCAAGTGAGGCGCATGCACACCATCCTGACC TCCAGAGACTCTATGATTAATGTCCCACAGAACCTTGAAGCTCGTCGGAGGATTGCCTTT TTCAGCAATTCATTGTTTATGAACATACCAAGGGCAACCCAGGTTGAGAAGATGATGTCT TTCAGTGTCTTGACGCCTTATTATAAGGAGGAGGTGTTGTACAGCAAGGACCAACTCTAT AAAGAGAATGAAGATGGCATCTCAATATTATACTATCTAAAACAGATTTACCCAGATGAG TGGGAGTACTTCGTAGAGCGAATGAAACGTGAGGGGATGTCTGATATTAATGAGCTGTAC AGTGAGAAGGAAAGGCTGAGGGATCTTCGGCACTGGGTCTCATATAGGGGACAGACATTA TCACGTACTGTGAGAGGAATGATGTACTATTATGAAGCTCTCAAGATGCTGACCTTTTTG GATTCTGCCTCTGAACATGATTTAAAGACTGGATCAAGGGAGTTAGCTACTATGGGTTCC TCAAGAATTGGATCCTCAAGGCATGACGGAGTTGCTGGTGGGTCAGGGTATTACAGCAGG GCATCTTCCTCTCATGCATTGAGTAGAGCAAGCAGTAGTGTGAGCTCCTTGTTTAAAGGA AGCGAATATGGGACTGTCCTCATGAAATACACATATGTAGTTGCATGCCAGGTATATGGA CAGCAGAAAGCTAAGAATGACCCCAATGCTTTTGAAATATTGGAGCTAATGAAAAATTAT GAAGCATTACGTGTTGCTTATGTTGATGAAAGGCAGATCAATGGCAACGAAAAAGAGTTC TTCTCTGTTCTCGTGAAATATGACCAACAATTGCAGCGGGAGGTTGAAATCTATCGGGTT AAGTTGCCTGGAGAGTTGAAGATTGGCGAAGGAAAGCCAGAAAATCAGAATCATGCACTC ATCTTCACAAGGGGCGATGCAGTTCAAACTATTGATATGAACCAAGACAACTACTTTGAA GAAGCTCTAAAGATGAGAAACCTACTAGAAGAGTTCAATCGTTATTATGGAATTCGCAAG CCTAAAATTCTTGGGGTTCGGGAACACGTCTTCACGGGTTCAGTTTCTTCTCTTGCTTGG TTCATGTCTGCCCAGGAGACAAGTTTTGTCACTCTGGGGCAGCGTGTTCTGGCTGATCCA CTTAAAGTCAGAATGCATTATGGCCACCCAGATGTTTTTGATCGTCTTTGGTTTTTGGGC CGAGGTGGTATCAGTAAAGCATCAAGAATAATCAACATTAGTGAGGACATTTTTGCTGGT TTCAACTGTACTCTCCGTGGTGGTAATGTTACACACCACGAGTATATCCAGGTTGGTAAA GGTAGAGATGTGGGCCTCAACCAGGTCTCTATGTTTGAAGCCAAGGTTGCTAGTGGCAAT GGTGAACAAACTTTGAGCCGAGATGTTTACAGGCTGGGCCACCGATTGGATTTCTTCCGG ATGCTCTCTTTCTTCTATACAACTGTTGGATTCTATTTCAATACAATGATGGTTGTGCTA ACTGTCTATGCATTTGTATGGGGGCGCTTTTACCTTGCACTCAGTGGGCTTGAGGACTAC ATCAACAAGAACACTTCCTCTTCCAATAATGCAGCCCTGGGAGCTGTTCTCAATCAGCAG TTCGTCATACAGCTAGGCCTGTTCACAGCTTTACCCATGATTATTGAAAATTCACTTGAG CACGGGTTCCTCACTGCTGTGTGGGATTTCATGAAAATGCAGCTACAGTTTGCATCTGTT TTCTACACATTCTCCATGGGAACAAAGACACACTATTATGGGAGGACAATCCTTCACGGA GGAGCGAAATATCGAGCCACTGGCAGAGGTTTTGTTGTGGAGCATAAGAAGTTTGCTGAA AACTATAGGCTCTATGCTCGCAGCCATTTCATCAAAGCTATAGAACTTGGTGTTATATTA ACTCTTTATGCATCTTATGGCAGTGCATCTGGGAATACATTGGTGTATATTCTGCTGACA CTTTCAAGTTGGTTTCTTGTGTCATCATGGATTCTTGCTCCATTCATTTTTAATCCCTCT GGTTTTGACTGGCTGAAGAATTTTAATGACTTTGAGGATTTTCTAAACTGGATATGGTTC CGGGGTGGGATCTCAGTTCAGTCAGATCAAAGCTGGGAGAAGTGGTGGGAGGATGAAACT GATCATCTCCGGACGACAGGTCTATGGGGCTGCATCTTGGAAATCATATTAGACCTTCGA TTTTTCTTTTTTCAGTATGCAATTGTATATCGGCTTCACATTGCTGATAATAGTAGAAGC ATCCTTGTCTATCTTCTTTCGTGGACATGCATCCTCCTAGCTTTTGTGGCTCTTGTGACA GTGGCTTACTTTCGAGACAGATATTCAGCAAAGAAGCACATACGGTATCGCCTTGTCCAG GCAATCATTGTTGGGAGCACTGTGGCTGCTATTGTTGTGCTGTTGGAATTCACAAAGTTT CAGTTTGTTGACACTTTTACTAGTCTTTTGGCTTTTCTGCCGACTGGCTGGGGAATCATA TCTATTGCTCTGGTATTCAAGCCATATCTGAGGAGATCTGAGATGGTCTGGAAAACTGTG GTTACCGTGGCACGTTTGTATGACATATTGTTTGGAGTAATTGTTATGGCACCTGTGGCT GTATTATCATGGTTGCCTGGGCTTCAGGAAATGCAAACAAGGATCCTGTTCAATGAAGCT TTCAGCAGGGGACTTCACATTTCTCAAATCATTACTGGCAAAAAGGCACATGTGTTTTGA GTTATATTATATTTGCCCGTGCTACTGTTTGTATGCCATGTTGAAAACAGGATGATCTTG CACACTGAACTGCAGATTAAGAGAGTATGCACTTGCTTTATGTTCTTGCAGCTAAATACA TATTCCAACTGACCATTTTCCAAAGTGAGCTGCTTCGTCATTCTGGAGGACTAGTTTGTC TCCATGGCCTATGGTTTATACAAGCTTTATGGCGTGTAGAGTAGATGGATGATAGCTCTT CCCTGTACAGGCAATCTATTTGTCGCCGATTCTTCTTAACTTTCGATATACACTTGGATG TTCATGCTAGAGATGATAGTCCATCTAATGAGATGTCGATGCTGTCCGTATTCGTAAAAT CGTAACTCCAGATTTTTGGTAGCCTTTAGATATCTAGTTAAGGCTGTACAAAACTTCATC ATGAGCGCTATTCAAGCTATGGTTTCTGTCCCCTACTCTTTTGTTGTAAAGGGTACGATA TTTCTGCATACCTGCACATATCTCAGCGTTATGTGGAGGACTAATCCTGTACACCTAAAT TACTGCCTGAAATGTCATCTTGCTTGG