Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043889_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:213109041:213112135:-1 gene:Zm00001d043889 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 9
Sequence

ATGGTCGGTGGGTTCCTGCGGCGCGGCCACAGCCTCGACAGGCTCCTGTCGAGGAGGCGC
CGGGCCGTTTCGCCCAGCCCCTCGTTCTCGTCCTCCTCCTCCACGCCGTCGTCTCCGCGT
GGCAGCAGCGTCAGGAGCGGCATGATGGCAGAGGACGACGACGACGCGCCCACCACCGTG
GCGGCGCCACCGCTGCAGAGACGGGTGCTGTCCAGGAGCCACGGCTCGCGGGCCACTCCC
GGCCGGTCCCAGGACCTGCCGCCGGTGCCATCGAGGACCGTCCGCGACAGTGGGCCGCCT
TCAGATTTAGATTTGATGAAGGATAAGTTCGCCAAGCTGCTGCTCGGGGAGGACATGTCC
GGCACGGGCAAAGGGGTGTCCTCCGCTCTCGCTCTCTCCAACGCCATCACAAATCTCGCG
GCCTCCATATTCGGGGAGCAGCGCCGCCTCGAGCCCATGTCCGCGGAGCGGAGGGCGCGG
TGGAACAAGGAGATCGACTGGCTCTTGTCGGTCGCCGACCACATCGTCGAATTCTCTCCC
TCGCAGCAGGTGTCCGAGGACGGAACTAACATCGAGGTCAGCATAGCAATTGCGACGCCA
ATTTCACCCTGCGCGCTTGCACTGACATGTATTTCGTCCTCCAATCAGGTGATGGGCACT
CAGCAGCGCGGGGATCTCCTCGTCAACATCCCCGCCTTGCGAAAACTCGACGCGATGCTC
CTAGTAAGCACGACGATATCGTATCTTTCTTTACAGCACACGCAATCAAATATACAGATG
CAATGCAACGGCTCCGGCCGGGTTTTTCTGAATTCATCTCGACGTTTTGTTTTCTTTTCT
GCCGCGGAACAGGAGTATCTGGACAGTTTCGGCGAGGCCCAGGAGTTCTGGTACGTGGCG
AAGGACGCGGACGGGGGCGAGGACGACGACGACAGCACGTGCGACAAATGGTGGATCCCG
ACGGTGAGGGTCCCCGCCGAGGGCCTGTCGGACGCGTCCAGGAAGTGGCTCCAGCACCAG
AAGGACCTCGTGGGGCAAGTTCTCAAGGCGGCCATGGCCATCAACGCCGACGTCATCGCG
GAGATGGAGATCCCCGAGGAGTATATCGAGTCCCTGCCGAAGAACGGAAGGTCCATTCTT
GGAGACTCCATGTACAAGATCATAACCGACGACGTCTTCGACCCCAACGAGCTCCTGCAG
TCCGTGGACCTGTCGACGGAGCACAAGATCGTGGACCTCAAGGACCGGATCGAGGCCTCC
GTCGTCATCTGGCACCGGAAGATCAGCAACAAGCTCTCGTGGGGCCCCGCCGGCGTCAGC
CTGGAGAAGCGGGAGGAGTTCGAGGAGCGGGCGCAGACCGCCCTGCTCATCCTCAAGCAC
AGGTTCCCCGGCATCCCTCAGTCGGCGCTCGACATCAGCAAGATCCAGTACAACACGGAC
GTCGGGTACGCCATCCTGGAGAGCTACTCCAGGACCCTCGAGAGCCTAGCCTTCGCGGTT
CTGTCTCGGATCGAGGACGTCCTCCACGCCGACGCCGTCGCCTGCGACCCCAAGCGCACC
AAGTCCAGGAGGCGGCCTAGCCTAGAGTGTGACGCCGCCGCCGAAGCCGAAGCCGAAGCC
GAAGCCGAGACGGCGCACCACAGCGGTTCCGTGCACTGGCAGGACCATCAGGATGCCGAG
GACGACGGCGGCGAGAAGCATCCGGACGGCAACGGTAGGAAGCTGAAGAAGCTCCACAGG
GTGGCGACCAAGAAGTTTCTCCACACGCAGAAGATCGACGGTGTGGCCGGCGGGCTCAAG
AGCTTCGCACACAGGTAG

Peptide Sequence

PEP ID

Zm00001d043889_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:213109041:213112135:-1 gene:Zm00001d043889 transcript:Zm00001d043889_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 9
Sequence

MVGGFLRRGHSLDRLLSRRRRAVSPSPSFSSSSSTPSSPRGSSVRSGMMAEDDDDAPTTV
AAPPLQRRVLSRSHGSRATPGRSQDLPPVPSRTVRDSGPPSDLDLMKDKFAKLLLGEDMS
GTGKGVSSALALSNAITNLAASIFGEQRRLEPMSAERRARWNKEIDWLLSVADHIVEFSP
SQQVSEDGTNIEVSIAIATPISPCALALTCISSSNQVMGTQQRGDLLVNIPALRKLDAML
LVSTTISYLSLQHTQSNIQMQCNGSGRVFLNSSRRFVFFSAAEQEYLDSFGEAQEFWYVA
KDADGGEDDDDSTCDKWWIPTVRVPAEGLSDASRKWLQHQKDLVGQVLKAAMAINADVIA
EMEIPEEYIESLPKNGRSILGDSMYKIITDDVFDPNELLQSVDLSTEHKIVDLKDRIEAS
VVIWHRKISNKLSWGPAGVSLEKREEFEERAQTALLILKHRFPGIPQSALDISKIQYNTD
VGYAILESYSRTLESLAFAVLSRIEDVLHADAVACDPKRTKSRRRPSLECDAAAEAEAEA
EAETAHHSGSVHWQDHQDAEDDGGEKHPDGNGRKLKKLHRVATKKFLHTQKIDGVAGGLK
SFAHR

Transcript Sequence

Transcript ID

Zm00001d043889_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:213109041:213112135:-1 gene:Zm00001d043889 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rop guanine nucleotide exchange factor 9
Sequence

ACCGTCGACGGTGGCAGACAATCGTGCGCGCGCCTGTGCCGGTCCGGGGGGGAGGGCTGG
CCATGCACGCGCGCACAAGGCACGCACAGCAACACAAAAGTTCCAAGGCCTCCCCTTCCT
CTAGCAGTGGCGAGGCAGGAAGGCAGGCCGGGTGTCCTGCCTCCCTTGCGCGCGCTCTCA
CGACCCATCCCGTCGTGCGTCATCGAGCTCCGGCGGGCGGGCCATGCACGCGTCCAGCTA
GCTCACACAGCGCCGTCTCGACCTGCTGCCGGTGCTCCACCCGGCCCGCGTCAACATCAC
GGCGGGCGGGCGCGCGCGTGAACGGTTTCCTCTCCGCATGACCCTGTGATGGTCGGTGGG
TTCCTGCGGCGCGGCCACAGCCTCGACAGGCTCCTGTCGAGGAGGCGCCGGGCCGTTTCG
CCCAGCCCCTCGTTCTCGTCCTCCTCCTCCACGCCGTCGTCTCCGCGTGGCAGCAGCGTC
AGGAGCGGCATGATGGCAGAGGACGACGACGACGCGCCCACCACCGTGGCGGCGCCACCG
CTGCAGAGACGGGTGCTGTCCAGGAGCCACGGCTCGCGGGCCACTCCCGGCCGGTCCCAG
GACCTGCCGCCGGTGCCATCGAGGACCGTCCGCGACAGTGGGCCGCCTTCAGATTTAGAT
TTGATGAAGGATAAGTTCGCCAAGCTGCTGCTCGGGGAGGACATGTCCGGCACGGGCAAA
GGGGTGTCCTCCGCTCTCGCTCTCTCCAACGCCATCACAAATCTCGCGGCCTCCATATTC
GGGGAGCAGCGCCGCCTCGAGCCCATGTCCGCGGAGCGGAGGGCGCGGTGGAACAAGGAG
ATCGACTGGCTCTTGTCGGTCGCCGACCACATCGTCGAATTCTCTCCCTCGCAGCAGGTG
TCCGAGGACGGAACTAACATCGAGGTCAGCATAGCAATTGCGACGCCAATTTCACCCTGC
GCGCTTGCACTGACATGTATTTCGTCCTCCAATCAGGTGATGGGCACTCAGCAGCGCGGG
GATCTCCTCGTCAACATCCCCGCCTTGCGAAAACTCGACGCGATGCTCCTAGTAAGCACG
ACGATATCGTATCTTTCTTTACAGCACACGCAATCAAATATACAGATGCAATGCAACGGC
TCCGGCCGGGTTTTTCTGAATTCATCTCGACGTTTTGTTTTCTTTTCTGCCGCGGAACAG
GAGTATCTGGACAGTTTCGGCGAGGCCCAGGAGTTCTGGTACGTGGCGAAGGACGCGGAC
GGGGGCGAGGACGACGACGACAGCACGTGCGACAAATGGTGGATCCCGACGGTGAGGGTC
CCCGCCGAGGGCCTGTCGGACGCGTCCAGGAAGTGGCTCCAGCACCAGAAGGACCTCGTG
GGGCAAGTTCTCAAGGCGGCCATGGCCATCAACGCCGACGTCATCGCGGAGATGGAGATC
CCCGAGGAGTATATCGAGTCCCTGCCGAAGAACGGAAGGTCCATTCTTGGAGACTCCATG
TACAAGATCATAACCGACGACGTCTTCGACCCCAACGAGCTCCTGCAGTCCGTGGACCTG
TCGACGGAGCACAAGATCGTGGACCTCAAGGACCGGATCGAGGCCTCCGTCGTCATCTGG
CACCGGAAGATCAGCAACAAGCTCTCGTGGGGCCCCGCCGGCGTCAGCCTGGAGAAGCGG
GAGGAGTTCGAGGAGCGGGCGCAGACCGCCCTGCTCATCCTCAAGCACAGGTTCCCCGGC
ATCCCTCAGTCGGCGCTCGACATCAGCAAGATCCAGTACAACACGGACGTCGGGTACGCC
ATCCTGGAGAGCTACTCCAGGACCCTCGAGAGCCTAGCCTTCGCGGTTCTGTCTCGGATC
GAGGACGTCCTCCACGCCGACGCCGTCGCCTGCGACCCCAAGCGCACCAAGTCCAGGAGG
CGGCCTAGCCTAGAGTGTGACGCCGCCGCCGAAGCCGAAGCCGAAGCCGAAGCCGAGACG
GCGCACCACAGCGGTTCCGTGCACTGGCAGGACCATCAGGATGCCGAGGACGACGGCGGC
GAGAAGCATCCGGACGGCAACGGTAGGAAGCTGAAGAAGCTCCACAGGGTGGCGACCAAG
AAGTTTCTCCACACGCAGAAGATCGACGGTGTGGCCGGCGGGCTCAAGAGCTTCGCACAC
AGGTAGCGTTTTTGCGTGCGTGCGTGCGTGCAATGGTGCCATACTGTTTGGAAACGAAGA
ACGTGTGTAAATAGTTCCAAGTTTATTTATATGCAAAAATAGGACCACGGGGTGCGGGTC
TTGCCCGAGGGATGATGACATGCGTTCTTCCTGTCCACGTCTGATCTGACATCTACCCAA
GAGCTGGCTGTGTCACGACGAAGTGACGAACCGAAAGTTTTACTCGAACCGGCGAACTGT
GCACAACTCAACGACGACAGTTTAATATATTACATGCATGGGACTAGATCTTGTCAAATG
ACAGGTTATTCAAAGACATGAGTGCCAATTAGACTGATGTACTCCACATCATCGATGTGC
TTCTAGCTAGAGGAGATCAAATTAAACTCCTAAAGTGCTTTCAGGATGTCTTCACAGATT
GTGAACTGCCCACCTTTCCTCGACGTTCGCAACAACTGCATAAAAGTTTCAGAGTTTGTT
CGGTTTTACCGTAATCCATATGGATTGAGAGGGATTGAGGGGGTTTTAATCTCTAGTAAG
TCAAAATATCTCATAATCCGTATCAATCTCCTTCAATCTATATGGATTGAAAAT