Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043855_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:212182979:212187895:1 gene:Zm00001d043855 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF1639 family protein
Sequence

ATGCGTGGTGCCGTCGAGGTCCACACGATTCGCAGAGACGTCGCCACGCCGAGTCCCCTG
AGGCTCAGAGACCCTCCGGCATTGGACATGATGAGGTACCAAAGGCTGAGCCCGGACTGC
CTCCCGCTCGGCAACGGCGGTGGCGGAGGCGGAGGCGCCGTGCCCCGCAAGCAGGCGTCC
AGATCCTCCTACATCAGAGAGGACGACGCCCCGGCCGTGGCCACGGATGGCTCCCGCCTC
GCATCGTACCTGGCGGCCTCCTCGCACGAGCCCAAGCCGCTGCGGGCCCGCGCGCCGCAG
CCGGCGCCTCTCTCCTCGGTGGCCGGCCGGAGCCCAGCGCGCGACCACGCACACCACCAC
CACACCTCCGACTCCTCCGACACCGCCTCCCCGAGCTCCACCGGCGGCGGCGGCGGCGCC
GTCGTCGGCGACGTGCTGCTGCAGTGGGGGCACAAGAAGCGGTCGAGCTGCCGGCGCGAC
TCGGCCACCGCCGCGGCGCCGTCCGCGCAGCGCCGACAGTCTGCCGTCGGTGGCGGGGTC
AAGATCCAGCGGCGCGCGTCGGCGCCAGCGCACGCGGAGAAGCTCATGCCGCCGCCGCCG
CCAGCCGCCACGCGTGGATCTAACTTGCGGTCGGCGTCCTCCTTCCCGTCCCGCGCCTCC
GCCTCCACCGCTGCCACCGGCAGCCACCACCCGCCCCACCACCACAGGACCGTCGAGGAT
CGATCAGGCGGGCAGAAGCGGTCGTCGCCGGACAAGACGCATAGGTCCACCATGGATGGC
GTCTACCACCATCACCACCACCAAGAGTCGCCGTTGACGGGCAACGGCGTCGCCACCGCC
GGTGAGAAGCTAGGCGTGGAGCGGTTCGAGCTGCCGCTGATCTACATCTCGCTGTCGCGG
AAGGAGAAGGAAGACGATTTCCTTGCGATGAAGGGCACCAAGCTGCCCCAGCGGCCCAAG
AAAAGGGCTAAGAACGTGGACAAGACCCTCCAATTTGTCTTCCCGGGTATGTGGTTGTCC
GATTTGACGAGGGGACGGTACGAGGTGCGGGAGAAGAAATGCGTGAAGAAGAAGCGAAGA
GGGCTGAAAGGGATGGAGAGCATGGACAGCGACTCGGAGTAA

Peptide Sequence

PEP ID

Zm00001d043855_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:212182979:212187895:1 gene:Zm00001d043855 transcript:Zm00001d043855_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF1639 family protein
Sequence

MRGAVEVHTIRRDVATPSPLRLRDPPALDMMRYQRLSPDCLPLGNGGGGGGGAVPRKQAS
RSSYIREDDAPAVATDGSRLASYLAASSHEPKPLRARAPQPAPLSSVAGRSPARDHAHHH
HTSDSSDTASPSSTGGGGGAVVGDVLLQWGHKKRSSCRRDSATAAAPSAQRRQSAVGGGV
KIQRRASAPAHAEKLMPPPPPAATRGSNLRSASSFPSRASASTAATGSHHPPHHHRTVED
RSGGQKRSSPDKTHRSTMDGVYHHHHHQESPLTGNGVATAGEKLGVERFELPLIYISLSR
KEKEDDFLAMKGTKLPQRPKKRAKNVDKTLQFVFPGMWLSDLTRGRYEVREKKCVKKKRR
GLKGMESMDSDSE

Transcript Sequence

Transcript ID

Zm00001d043855_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:212182979:212187895:1 gene:Zm00001d043855 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF1639 family protein
Sequence

CCGTCGCCATTGCTGCCTCTTCTCCTCCTTCCTCCGTCCCTCCCTCCCTCGCTCTCCCAT
CCTCCTCTGTTCTCACAATTTTTGCTTCTGAATTTCCTGCCGGTGTGCCGGCATCTTCTT
TCTACTGAGGCGTAGACCAAGGAGGAGAGTAATTGGCGAGCGGTTGGAGAACGAATACGA
GACGGCTCCGGCGGCCGGAGGCCCATTTTTTGATGCGTGGTGCCGTCGAGGTCCACACGA
TTCGCAGAGACGTCGCCACGCCGAGTCCCCTGAGGCTCAGAGACCCTCCGGCATTGGACA
TGATGAGGTACCAAAGGCTGAGCCCGGACTGCCTCCCGCTCGGCAACGGCGGTGGCGGAG
GCGGAGGCGCCGTGCCCCGCAAGCAGGCGTCCAGATCCTCCTACATCAGAGAGGACGACG
CCCCGGCCGTGGCCACGGATGGCTCCCGCCTCGCATCGTACCTGGCGGCCTCCTCGCACG
AGCCCAAGCCGCTGCGGGCCCGCGCGCCGCAGCCGGCGCCTCTCTCCTCGGTGGCCGGCC
GGAGCCCAGCGCGCGACCACGCACACCACCACCACACCTCCGACTCCTCCGACACCGCCT
CCCCGAGCTCCACCGGCGGCGGCGGCGGCGCCGTCGTCGGCGACGTGCTGCTGCAGTGGG
GGCACAAGAAGCGGTCGAGCTGCCGGCGCGACTCGGCCACCGCCGCGGCGCCGTCCGCGC
AGCGCCGACAGTCTGCCGTCGGTGGCGGGGTCAAGATCCAGCGGCGCGCGTCGGCGCCAG
CGCACGCGGAGAAGCTCATGCCGCCGCCGCCGCCAGCCGCCACGCGTGGATCTAACTTGC
GGTCGGCGTCCTCCTTCCCGTCCCGCGCCTCCGCCTCCACCGCTGCCACCGGCAGCCACC
ACCCGCCCCACCACCACAGGACCGTCGAGGATCGATCAGGCGGGCAGAAGCGGTCGTCGC
CGGACAAGACGCATAGGTCCACCATGGATGGCGTCTACCACCATCACCACCACCAAGAGT
CGCCGTTGACGGGCAACGGCGTCGCCACCGCCGGTGAGAAGCTAGGCGTGGAGCGGTTCG
AGCTGCCGCTGATCTACATCTCGCTGTCGCGGAAGGAGAAGGAAGACGATTTCCTTGCGA
TGAAGGGCACCAAGCTGCCCCAGCGGCCCAAGAAAAGGGCTAAGAACGTGGACAAGACCC
TCCAATTTGTCTTCCCGGGTATGTGGTTGTCCGATTTGACGAGGGGACGGTACGAGGTGC
GGGAGAAGAAATGCGTGAAGAAGAAGCGAAGAGGGCTGAAAGGGATGGAGAGCATGGACA
GCGACTCGGAGTAATAAGGTGGAGGCGCGGCGCAGCCATCTTCCATGGGGGTGGGAGTCG
AGGAAGAAGGGGCCCTAGAGAAGGAGGAAAGGAGGAGACGTTGAGGGCAAGAGTGAGCGG
TCGCGCCTGCTCACCTTGAGCCGCCGCCGCGCTGGAAGCGTCGGAGGACGGCGGTGCTTG
CCACACACAGGGCTGTGTTTCTGGCGGTCGTGAGGTTTTTTTGTTCCTTGATGCTGAGCT
GCGTCTCCGCGGCCGCTGTTTGCAGCATGTAACCCTGAAACTCTGCGATCCGTCTATCTC
TGCCTTCTTCATTTTTTCTCATGCGCTTTCGAGCCACCTGAAACGAGACGGTTGGATTCA
TTCGATTGCACCGGTGACGGTAAGG