Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043845_T082
CDS Infomation	cds chromosome:B73_RefGen_v4:3:211908426:211913626:1 gene:Zm00001d043845 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glutamate synthase 1 [NADH] chloroplastic
Sequence	ATGGAACCACTTCCTGATGGCTCAATGAATCCAAGACGAAGTGCAATCAAGCAAGTTGCC AGTGGACGGTTTGGAGTTTCCAGCTATTACCTGACTAATGCAGATGAGCTGCAGATAAAA ATGGCTCAGGGTGCCAAGCCTGGTGAAGGTGGTGAACTTCCAGGCCACAAGGTTATTGGT GACATTGCTGTCACAAGACACTCCACAGCTGGTGTAGGACTGATCAGTCCACCTCCGCAT CATGATATTTATTCGATTGAGGATCTTGCGCAGCTTATACATGACCTTAAGAATTCAAAT CCTGGAGCCCGCATCAGTGTCAAACTAGTTTCTGAGGCTGGTGTGGGAGTTGTTGCTAGT GGTGTTGTAAAAGGACATGCAGACCATGTTCTTATATCTGGCCATGATGGTGGCACTGGA GCTTCAAGATGGACCGGTATCAAGAATGCTGGACTTCCATGGGAACTTGGGTTGGCTGAG ACACATCAAACTCTAGTAGCAAATGGGCTTCGTGGTCGAGCTGTCCTGCAAACAGATGGA CAGTTGAAGACTGGTAGAGATGTTGCTGTTGCTTGCTTGCTTGGGGCAGAGGAATTTGGT TTCAGCACTGCCCCACTGATTACACTTGGCTGTATTATGATGCGAAAATGCCACATGAAC ACTTGTCCTGTTGGTATAGCTACTCAAGACCCAGTGCTTCGAGAAAAGTTTGCTGGAGAA CCAGAGCATGTCATCAACTTTTTCTTCATGCTTGCTGAGGAGCTAAGAGAAATCATGGCA AACCTTGGGTTCCGCACCATTACTGAAATGGTTGGACGTTCTGATATGCTTGAGGTTGAT CCAGAAGTAGTGAAGAGTAATGAGAAACTTGAGAACATTGATCTCTCACTAATCTTGAAA CCAGCTTCAGAGATTCGTCCAGGTGTTGCTCAGTACTGTGTTGAGAAGCAAGACCATGGC CTAGACATGGCATTAGATAACAAACTAATAGATCTGTCAAGAACTGCTATTGAAAAGCAA GTTCGTGTTTTCATTGAGACTCCAATCCAGAACACGAATCGAGCAGTTGGAACTATGCTC AGTCATCAAGTCACAAAACGTTATCACATGAATGGATTGCCTGCTGGTACAATTCATGTG AAGTTTACTGGAAGTGCTGGTCAAAGTTTTGGCGCTTTTCTTTGTCCTGGAATCACTCTT GAACTGGAAGGAGACAGCAATGATTATGTTGGTAAAGGATTATCTGGTGGAAAAATTGTT GTGTACCCACCAAGGAACAGTTCTTTTAGTCCAGAGGACAATATTGTCATTGGTAATGTG GCTCTGTATGGTGCTACCATGGGAGAGGCATATTTCAATGGTATGGCAGCAGAAAGATTT TGTGTTCGCAACTCAGGTGCTCAAGCAGTGGTTGAAGGAATTGGAGATCACGGGTGTGAG TACATGACTGGAGGCACTGTTGTTATCCTCGGAAAAACAGGGCGGAACTTTGCTGCTGGC ATGAGTGGAGGCATTGCCTATGTTTATGATGTTGATGGGAAATTCAGTGCTCGCTGCAAC AATGAGTTAGTTGATCTATATCATGTGGAGGAAGAGGATGACATCATCACATTGAAAATG ATGATTGAGCAACATCGTCGCAACACTGAGAGTGTTTTGGCTAGAGATATACTCTCCGAT TTTGATAACCTTCTTCCAAAATTTGTAAAAGTATATCCAAGGGACTATAAGAGGGTTCTA GAAAGCATGAAGGTGGAAAAGGCTGTTGCTAAGCATGCAAAGGAGCCTAAGATGGCAAAT GGAATTTCTGTGACAACTAAGAAAGTACAACCTGATCAGTCAGCAAGCCGACCAACACAT GTTGCCAATGCCAAAAAGTACAGGGGCTTTATTACATATGAGCGAGAGAGTATTTCATAC AGAGATCCAAAAGAGCGTGTTAGAGATTGGAAGGAAGTTGCAATCGAATCTACACCTGGT CCACTATTAAATACACAATCTGCTCGTTGCATGGACTGTGGCACTCCTTTCTGTCATCAG GAAAGCTCAGGTGCTGGTTGTCCTCTTGGAAATAAGATCCCAGAATTCAATGAATTAGTT CACCAGAACAGATGGCGCGAAGCATTGGATCGACTACTTGAGACAAACAACTTCCCTGAA TTCACTGGACGAGTTTGCCCTGCTCCTTGTGAGGGGTCATGTGTTCTTGGGATTATTGAG AATCCGGTGTCTATCAAAAGTATAGAATGTGCAATCATAGACAAAGGTTTTGAAGAGGGA TGGATGATTCCACGACCTCCACTTCAAAGAACAGGAAGGAAGGTGGCCATTGTTGGCAGT GGACCATCTGGTTTGGCTGCTGCAGATCAACTAAATAAAATGGGCCACTTCGTAACTGTG TTCGAACGTGCAGATCGAATTGGAGGTTTAATGATGTATGGTGTGCCAAACATGAAGACA GACAAGATTGGCGTTGTCCAGCGCCGTGTTAATTTAATGGCTGAAGAGGGTGTCACATTT GTGGTGAATGCCAATGTTGGTAGTGATCCTTTGTACTCGATTGAACGTCTACGTTCTGAA AATGATGCGGTTATTTTGGCTTGTGGAGCAACAAAACCGAGAGATCTCACCATCCCTGGA CGCGAGCTATCTGGAGTTCATTTTGCAATGGAATTTCTCCATGCAAATACGAAAAGTTTA CTCGACAGCAACCTGGAGGATGGTAAATATATCTCCGCCCGTGGGAAAAAGGTGGTGGTT ATTGGTGGAGGTGATACAGGCACAGATTGCATTGGCACATCTATTAGGCATGGTTGCACC AGCCTTGTAAATCTTGAACTCCTGTCAAAACCACCAAGCACTAGAGCTGCTGACAACCCA TGGCCCCAGTGGCCAAGAATTTTCCGTGTTGACTATGGGCATCAAGAAGCTGCTACCAAG TTTGGGAAGGATCCAAGAACTTACGGAGTCTTGACAAAGCGTTTTATTGGCGATGGAAAT GGCAAGGTGAAGGCCCTTGAGGTAGTGCGTGTGAAGTGGGAGAAAGTAGATGGAAGATTT CAACTCAAGGAGATGGAAGGATCAGAAGAGATTATTGAGGCTGATCTCGTCCTCCTAGCT ATGGGATTCTTGGGTCCTGAAGCGACAATAGCTGAGAAATTGGGTTTGGAGAAGGACAAC AGATCAAACTTCAAAGCGCAGTTTGGAGACTTCGCTACCAGTGTCGATGGTGTGTTTGCC GCCGGGGACTGCAGACGTGGACAATCACTGGTGGTTTGGGCCATCACGGAGGGGCGGCAG GCTGCTGCAGCGGTAGACAAGTACTTGTCAAGGTATGATCAGAATGCTGCTGCTACAGGC GACAGCACTCCCTCCGGGACAGGGCTCGTTCAGCCGGTTGCGGCATAG

Peptide Sequence

PEP ID	Zm00001d043845_P082
PEP Infomation	pep chromosome:B73_RefGen_v4:3:211908426:211913626:1 gene:Zm00001d043845 transcript:Zm00001d043845_T082 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glutamate synthase 1 [NADH] chloroplastic
Sequence	MEPLPDGSMNPRRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIG DIAVTRHSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNSNPGARISVKLVSEAGVGVVAS GVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANGLRGRAVLQTDG QLKTGRDVAVACLLGAEEFGFSTAPLITLGCIMMRKCHMNTCPVGIATQDPVLREKFAGE PEHVINFFFMLAEELREIMANLGFRTITEMVGRSDMLEVDPEVVKSNEKLENIDLSLILK PASEIRPGVAQYCVEKQDHGLDMALDNKLIDLSRTAIEKQVRVFIETPIQNTNRAVGTML SHQVTKRYHMNGLPAGTIHVKFTGSAGQSFGAFLCPGITLELEGDSNDYVGKGLSGGKIV VYPPRNSSFSPEDNIVIGNVALYGATMGEAYFNGMAAERFCVRNSGAQAVVEGIGDHGCE YMTGGTVVILGKTGRNFAAGMSGGIAYVYDVDGKFSARCNNELVDLYHVEEEDDIITLKM MIEQHRRNTESVLARDILSDFDNLLPKFVKVYPRDYKRVLESMKVEKAVAKHAKEPKMAN GISVTTKKVQPDQSASRPTHVANAKKYRGFITYERESISYRDPKERVRDWKEVAIESTPG PLLNTQSARCMDCGTPFCHQESSGAGCPLGNKIPEFNELVHQNRWREALDRLLETNNFPE FTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKGFEEGWMIPRPPLQRTGRKVAIVGS GPSGLAAADQLNKMGHFVTVFERADRIGGLMMYGVPNMKTDKIGVVQRRVNLMAEEGVTF VVNANVGSDPLYSIERLRSENDAVILACGATKPRDLTIPGRELSGVHFAMEFLHANTKSL LDSNLEDGKYISARGKKVVVIGGGDTGTDCIGTSIRHGCTSLVNLELLSKPPSTRAADNP WPQWPRIFRVDYGHQEAATKFGKDPRTYGVLTKRFIGDGNGKVKALEVVRVKWEKVDGRF QLKEMEGSEEIIEADLVLLAMGFLGPEATIAEKLGLEKDNRSNFKAQFGDFATSVDGVFA AGDCRRGQSLVVWAITEGRQAAAAVDKYLSRYDQNAAATGDSTPSGTGLVQPVAA

Transcript Sequence

Transcript ID	Zm00001d043845_T082
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:211908426:211913626:1 gene:Zm00001d043845 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glutamate synthase 1 [NADH] chloroplastic
Sequence	AGGTGAGGGAGGGGAACAGCCCTCTCGGATGGAACCACTTCCTGATGGCTCAATGAATCC AAGACGAAGTGCAATCAAGCAAGTTGCCAGTGGACGGTTTGGAGTTTCCAGCTATTACCT GACTAATGCAGATGAGCTGCAGATAAAAATGGCTCAGGGTGCCAAGCCTGGTGAAGGTGG TGAACTTCCAGGCCACAAGGTTATTGGTGACATTGCTGTCACAAGACACTCCACAGCTGG TGTAGGACTGATCAGTCCACCTCCGCATCATGATATTTATTCGATTGAGGATCTTGCGCA GCTTATACATGACCTTAAGAATTCAAATCCTGGAGCCCGCATCAGTGTCAAACTAGTTTC TGAGGCTGGTGTGGGAGTTGTTGCTAGTGGTGTTGTAAAAGGACATGCAGACCATGTTCT TATATCTGGCCATGATGGTGGCACTGGAGCTTCAAGATGGACCGGTATCAAGAATGCTGG ACTTCCATGGGAACTTGGGTTGGCTGAGACACATCAAACTCTAGTAGCAAATGGGCTTCG TGGTCGAGCTGTCCTGCAAACAGATGGACAGTTGAAGACTGGTAGAGATGTTGCTGTTGC TTGCTTGCTTGGGGCAGAGGAATTTGGTTTCAGCACTGCCCCACTGATTACACTTGGCTG TATTATGATGCGAAAATGCCACATGAACACTTGTCCTGTTGGTATAGCTACTCAAGACCC AGTGCTTCGAGAAAAGTTTGCTGGAGAACCAGAGCATGTCATCAACTTTTTCTTCATGCT TGCTGAGGAGCTAAGAGAAATCATGGCAAACCTTGGGTTCCGCACCATTACTGAAATGGT TGGACGTTCTGATATGCTTGAGGTTGATCCAGAAGTAGTGAAGAGTAATGAGAAACTTGA GAACATTGATCTCTCACTAATCTTGAAACCAGCTTCAGAGATTCGTCCAGGTGTTGCTCA GTACTGTGTTGAGAAGCAAGACCATGGCCTAGACATGGCATTAGATAACAAACTAATAGA TCTGTCAAGAACTGCTATTGAAAAGCAAGTTCGTGTTTTCATTGAGACTCCAATCCAGAA CACGAATCGAGCAGTTGGAACTATGCTCAGTCATCAAGTCACAAAACGTTATCACATGAA TGGATTGCCTGCTGGTACAATTCATGTGAAGTTTACTGGAAGTGCTGGTCAAAGTTTTGG CGCTTTTCTTTGTCCTGGAATCACTCTTGAACTGGAAGGAGACAGCAATGATTATGTTGG TAAAGGATTATCTGGTGGAAAAATTGTTGTGTACCCACCAAGGAACAGTTCTTTTAGTCC AGAGGACAATATTGTCATTGGTAATGTGGCTCTGTATGGTGCTACCATGGGAGAGGCATA TTTCAATGGTATGGCAGCAGAAAGATTTTGTGTTCGCAACTCAGGTGCTCAAGCAGTGGT TGAAGGAATTGGAGATCACGGGTGTGAGTACATGACTGGAGGCACTGTTGTTATCCTCGG AAAAACAGGGCGGAACTTTGCTGCTGGCATGAGTGGAGGCATTGCCTATGTTTATGATGT TGATGGGAAATTCAGTGCTCGCTGCAACAATGAGTTAGTTGATCTATATCATGTGGAGGA AGAGGATGACATCATCACATTGAAAATGATGATTGAGCAACATCGTCGCAACACTGAGAG TGTTTTGGCTAGAGATATACTCTCCGATTTTGATAACCTTCTTCCAAAATTTGTAAAAGT ATATCCAAGGGACTATAAGAGGGTTCTAGAAAGCATGAAGGTGGAAAAGGCTGTTGCTAA GCATGCAAAGGAGCCTAAGATGGCAAATGGAATTTCTGTGACAACTAAGAAAGTACAACC TGATCAGTCAGCAAGCCGACCAACACATGTTGCCAATGCCAAAAAGTACAGGGGCTTTAT TACATATGAGCGAGAGAGTATTTCATACAGAGATCCAAAAGAGCGTGTTAGAGATTGGAA GGAAGTTGCAATCGAATCTACACCTGGTCCACTATTAAATACACAATCTGCTCGTTGCAT GGACTGTGGCACTCCTTTCTGTCATCAGGAAAGCTCAGGTGCTGGTTGTCCTCTTGGAAA TAAGATCCCAGAATTCAATGAATTAGTTCACCAGAACAGATGGCGCGAAGCATTGGATCG ACTACTTGAGACAAACAACTTCCCTGAATTCACTGGACGAGTTTGCCCTGCTCCTTGTGA GGGGTCATGTGTTCTTGGGATTATTGAGAATCCGGTGTCTATCAAAAGTATAGAATGTGC AATCATAGACAAAGGTTTTGAAGAGGGATGGATGATTCCACGACCTCCACTTCAAAGAAC AGGAAGGAAGGTGGCCATTGTTGGCAGTGGACCATCTGGTTTGGCTGCTGCAGATCAACT AAATAAAATGGGCCACTTCGTAACTGTGTTCGAACGTGCAGATCGAATTGGAGGTTTAAT GATGTATGGTGTGCCAAACATGAAGACAGACAAGATTGGCGTTGTCCAGCGCCGTGTTAA TTTAATGGCTGAAGAGGGTGTCACATTTGTGGTGAATGCCAATGTTGGTAGTGATCCTTT GTACTCGATTGAACGTCTACGTTCTGAAAATGATGCGGTTATTTTGGCTTGTGGAGCAAC AAAACCGAGAGATCTCACCATCCCTGGACGCGAGCTATCTGGAGTTCATTTTGCAATGGA ATTTCTCCATGCAAATACGAAAAGTTTACTCGACAGCAACCTGGAGGATGGTAAATATAT CTCCGCCCGTGGGAAAAAGGTGGTGGTTATTGGTGGAGGTGATACAGGCACAGATTGCAT TGGCACATCTATTAGGCATGGTTGCACCAGCCTTGTAAATCTTGAACTCCTGTCAAAACC ACCAAGCACTAGAGCTGCTGACAACCCATGGCCCCAGTGGCCAAGAATTTTCCGTGTTGA CTATGGGCATCAAGAAGCTGCTACCAAGTTTGGGAAGGATCCAAGAACTTACGGAGTCTT GACAAAGCGTTTTATTGGCGATGGAAATGGCAAGGTGAAGGCCCTTGAGGTAGTGCGTGT GAAGTGGGAGAAAGTAGATGGAAGATTTCAACTCAAGGAGATGGAAGGATCAGAAGAGAT TATTGAGGCTGATCTCGTCCTCCTAGCTATGGGATTCTTGGGTCCTGAAGCGACAATAGC TGAGAAATTGGGTTTGGAGAAGGACAACAGATCAAACTTCAAAGCGCAGTTTGGAGACTT CGCTACCAGTGTCGATGGTGTGTTTGCCGCCGGGGACTGCAGACGTGGACAATCACTGGT GGTTTGGGCCATCACGGAGGGGCGGCAGGCTGCTGCAGCGGTAGACAAGTACTTGTCAAG GTATGATCAGAATGCTGCTGCTACAGGCGACAGCACTCCCTCCGGGACAGGGCTCGTTCA GCCGGTTGCGGCATAGTAGCATAAACTGGAGCAAGTTTTACGTTTGTCAGTGTATCCTGT GGTTCCACACAGCAAACACCGTTCTTGTATTTTTTTGACGATAGATAAACAGTTGAAAGT TTTGGTGGCTATTGTCTCTTTTTTCTGCTGCATGTGGTTTTGTAGTCCAAACAATGTACA GTTTCCCCTTTCTTAAATAGATGTAAATTTGTCGTGTGAT