Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043843_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:3:211643764:211669315:-1 gene:Zm00001d043843 gene_biotype:protein_coding transcript_biotype:protein_coding description:Splicing factor SF3a60 homolog
Sequence	ATGGCGTCAACGGTGCTGGAGGCGACGCGGGCGGCCCATGAGGATCTGGAGAGGCTGGAG CGGCTCGCGGTGAGCGAGCTGCAACGGGAGCCCGCTAACCCGCGTGACCGCCTCTTTCAG TCCCACCGCGTCCGCCACATGCTCGACCTCGTCGTCTCCACCTCCGGCAAGCTCGTGGAA ATTTACGAGGACAAGGACAATGCTAGGAAGGATGAGATCAACACTCATCTTACTGCACCC ACGCAAAGTGGACTGTTTAGCAAGTACTATGAAAGGCTCAAAGAGATCCGTGAATATCAT CGGCGGAACCCATCTGCCCGCTTTGTTAGTACAACTGATGACTATGAAGAGCTTCTAAAG GAGGAACCAGTTATTGAATTCACTGGCGAGGAAACTTTTGGCCGTTACCTTGACTTGCAT GAGCTTTATAATGAGTTCATAAATTCCAAGTTCGGAACACTGATGGAATATTCAGCTTAT GTTGGCTGTTTCTCCCAGACGGACAAGATCTCACATAGTCATAAAGCTACCAGAAAATAC AGAGAATACTTGGAACATATTTTGGAATATCTGACATCATTTCTGTATCGCACAGAGCCA TTGCAAGACATTGATAAGATTTTTTTAAAGCTGGAGAGTGAATTCGAGGAACAATGGGCC AATGAAGGAATACTTGGATGGGGGAATAAAGGGACAGAAAAAGAGTCTGAAATAGATCTC GATTACTACAGCACAGTTGAAGAACTTGTTGAGCTTGGCCCAGAAAAATTAAAACAGGCT TTAGCTGCTCGAGGTTTGAAGAGTGGCGGTACTGTTCAACAGCGTGCAGATCGTCTTTTC TTGTTGAAGGTTACACCGTTGGAACAACTAGATAGGAAGCATTTTGCCAAAGTTCCACAT ACTAAAGATGGCTCAAACACAGCTCCTAATGGTAATGCTTTCAAGGAGGATATGAAGAAA GAAATTGCATTGATGGAAGTGAAGATGAAACGTCTTTGTGAGCTGCTAGATGAGGCCTTT GTAAGGACAAAGGAAAATGCGGAGAAGAAGCTTACTTTGACATATGAAGAGATGGAAGCA GAACGGGAAGAGGAGGAGGTACAAGTTGACACTGAGAGTGATGACGAAGAGCAACAAATC TACAATCCTCTCAAGTTGCCGATGGGTTGGGATGGCAAACCTATCCCCTACTGGCTGTAC AAGCTACATGGCCTTGGGCAGGAATTCAAGTGTGAGATATGTGGAAACCATAGCTATTGG GGGCGAAGGGCTTATGAGCGTCATTTCAAGGAATGGCGTCATCAGCATGGGATGCGATGC CTTGGCATTCCCAATACTAAGAATTTCAATGAAATTACATCCATCGAGAAAAAACGACCG GAAAAGACACTTGTTTTCTCTGTGGGCCATGACTCCGTCACGTGA

Peptide Sequence

PEP ID	Zm00001d043843_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:3:211643764:211669315:-1 gene:Zm00001d043843 transcript:Zm00001d043843_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Splicing factor SF3a60 homolog
Sequence	MASTVLEATRAAHEDLERLERLAVSELQREPANPRDRLFQSHRVRHMLDLVVSTSGKLVE IYEDKDNARKDEINTHLTAPTQSGLFSKYYERLKEIREYHRRNPSARFVSTTDDYEELLK EEPVIEFTGEETFGRYLDLHELYNEFINSKFGTLMEYSAYVGCFSQTDKISHSHKATRKY REYLEHILEYLTSFLYRTEPLQDIDKIFLKLESEFEEQWANEGILGWGNKGTEKESEIDL DYYSTVEELVELGPEKLKQALAARGLKSGGTVQQRADRLFLLKVTPLEQLDRKHFAKVPH TKDGSNTAPNGNAFKEDMKKEIALMEVKMKRLCELLDEAFVRTKENAEKKLTLTYEEMEA EREEEEVQVDTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYW GRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEKKRPEKTLVFSVGHDSVT

Transcript Sequence

Transcript ID	Zm00001d043843_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:211643764:211669315:-1 gene:Zm00001d043843 gene_biotype:protein_coding transcript_biotype:protein_coding description:Splicing factor SF3a60 homolog
Sequence	ATCGCAAACAGGCCTCGTCTCGTCCTCGTCCTCGTCCGCCGCCAAATCGAACCCCCCCAA ACCCTAGCTACCCGGCGCAACGTCCCCTTCCCGCCTCTCCGCGGCGCTGCGTGACACCCG GCCTCCGCTACGAAACACCGGGGCGGGTGTAGCCTAGCGGGCGGGCCATGGCGTCAACGG TGCTGGAGGCGACGCGGGCGGCCCATGAGGATCTGGAGAGGCTGGAGCGGCTCGCGGTGA GCGAGCTGCAACGGGAGCCCGCTAACCCGCGTGACCGCCTCTTTCAGTCCCACCGCGTCC GCCACATGCTCGACCTCGTCGTCTCCACCTCCGGCAAGCTCGTGGAAATTTACGAGGACA AGGACAATGCTAGGAAGGATGAGATCAACACTCATCTTACTGCACCCACGCAAAGTGGAC TGTTTAGCAAGTACTATGAAAGGCTCAAAGAGATCCGTGAATATCATCGGCGGAACCCAT CTGCCCGCTTTGTTAGTACAACTGATGACTATGAAGAGCTTCTAAAGGAGGAACCAGTTA TTGAATTCACTGGCGAGGAAACTTTTGGCCGTTACCTTGACTTGCATGAGCTTTATAATG AGTTCATAAATTCCAAGTTCGGAACACTGATGGAATATTCAGCTTATGTTGGCTGTTTCT CCCAGACGGACAAGATCTCACATAGTCATAAAGCTACCAGAAAATACAGAGAATACTTGG AACATATTTTGGAATATCTGACATCATTTCTGTATCGCACAGAGCCATTGCAAGACATTG ATAAGATTTTTTTAAAGCTGGAGAGTGAATTCGAGGAACAATGGGCCAATGAAGGAATAC TTGGATGGGGGAATAAAGGGACAGAAAAAGAGTCTGAAATAGATCTCGATTACTACAGCA CAGTTGAAGAACTTGTTGAGCTTGGCCCAGAAAAATTAAAACAGGCTTTAGCTGCTCGAG GTTTGAAGAGTGGCGGTACTGTTCAACAGCGTGCAGATCGTCTTTTCTTGTTGAAGGTTA CACCGTTGGAACAACTAGATAGGAAGCATTTTGCCAAAGTTCCACATACTAAAGATGGCT CAAACACAGCTCCTAATGGTAATGCTTTCAAGGAGGATATGAAGAAAGAAATTGCATTGA TGGAAGTGAAGATGAAACGTCTTTGTGAGCTGCTAGATGAGGCCTTTGTAAGGACAAAGG AAAATGCGGAGAAGAAGCTTACTTTGACATATGAAGAGATGGAAGCAGAACGGGAAGAGG AGGAGGTACAAGTTGACACTGAGAGTGATGACGAAGAGCAACAAATCTACAATCCTCTCA AGTTGCCGATGGGTTGGGATGGCAAACCTATCCCCTACTGGCTGTACAAGCTACATGGCC TTGGGCAGGAATTCAAGTGTGAGATATGTGGAAACCATAGCTATTGGGGGCGAAGGGCTT ATGAGCGTCATTTCAAGGAATGGCGTCATCAGCATGGGATGCGATGCCTTGGCATTCCCA ATACTAAGAATTTCAATGAAATTACATCCATCGAGAAAAAACGACCGGAAAAGACACTTG TTTTCTCTGTGGGCCATGACTCCGTCACGTGAAGAATCTGAACCGTGGTGAGATTTGGTG ACGGGGACGCATGGCGCCAAGCCGACCTCGCGACTGCCGGCAGGTTTGGCGGATTTGTCT GCACAAAAGCGTCGCTGCTTCCTATGTTTACGTCTAGCGATCCAGCCTCAAGCTAGTTTG ACAGTGGTCAAAGTCGGCGAGGGGTCATTTCAAACAACATAAGGTGGTATTTGTAAAAAT ATGACGTGGGACGATCGTTGAAACTGGTGCTTTAATATAGTAGAGATGAGATTTGCCCAT ATCATATTGGCTTCCACATTTCCTTGTCCTTTATTTATTCTGTTTCCTTATTTGAAACAG AATGCAAAAGAATGCATGTCTGCCATATTCTTGACATTGGCCGGTTTATTGTATATTGTA TGTGCTTTAACATTTATTTCTACTCTCAGGAGGCGAAAGCGCTCTGGGAGAAAATTCAAG CACGACAAGGGGTGAATAAGTGGCGGCCAGACCTAGAGGAAGAGTATGAAGATCAGGAAG GCAACATCTACAACAAGAAGACCTACACTGACCTGCAGCGTCAAGGCCTGATCTAGGGCT CCTGCTGGTTAAAGTTGTCGGGATTTGTTCAGAACTTATCTCATGTAGTTGTAACTCTGA AAATATTGGCCCATCTGGCATACATTTTATGTAATAACATGATTCTCCGGAACTCATGTG