Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043841_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:3:211611084:211613691:-1 gene:Zm00001d043841 gene_biotype:protein_coding transcript_biotype:protein_coding description:Katanin p60 ATPase-containing subunit A1
Sequence

ATGGATGCGTTCTTGTCATGCCTGGACGACGGCCCGACGGCTTCGCCGCCGCGCGCCGCC
CCGCCGCCATCCCCGGCGCTTAGCGCGCGGGACCTCTACAGCTTCATATGCAGCGGTCCA
CTGGTGGACAGGATCGGCTATACCAAAGAGAAGGTCGCCGACTCCATCGGCCGGTGGCTT
CGCTGCGGGGTTGACGTGGCGCGCCTCCTCCGCCTCGACGAGCTCCAGCTGTCGGAGGCC
GAGAAGGCCCGGGTTTACCAGTTCTACATCCCCGTCTTCCTCTGGTGCGAGGACCAGGTC
ATAGAGCACAGAGCCAAGTACAGCGAGGGCGACGACATCCCGCCATTGGTGATCGGGGTC
AGCGCTCCCCAAGGAAGTGGAAAGACGACTCTGGTCTTCGCACTTGATTATCTTTTTCAG
GTTGCTGGTAGGAAATCCGCCACATTGTCTATAGATGACTTCTATTTGACAGCAAAAGAG
CAGAATGAACTGAGGGACAGATACCCTGGAAATGCTCTTTTGGAGCTCCGTGGAAATGCT
GGAAGCCACAATCTCCAATTCAGTGTTGAAACACTTGAGTCACTGATGAAACTAACAAAA
GAAGGCATCAAGATGAAGGTTCCACGGTATGACAAGTCTGCTTTTGGGGGAAGAGGTGAT
CGTGCTGATCCTTCTGTGTGGCCGGAGGTTGAAGGGCCGTTAGAGCTCGAGGTGGTTAAC
AACAACCTTGAAGCATACTATGACGCTTGGGACAGGTTCATCGACTCGTGGATCGTTATA
AAAATAAGAGAACCTAGTTCTGTCTATCAGTGGAGGCTGCAGGCGGAGATAGCTATGAGA
GCAGATGGAAAACCTGGAATGTCTGATGAGGAGGTGCGTTCTCTGACAAAACTATTCGCT
CCTTAG

Peptide Sequence

PEP ID

Zm00001d043841_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:3:211611084:211613691:-1 gene:Zm00001d043841 transcript:Zm00001d043841_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Katanin p60 ATPase-containing subunit A1
Sequence

MDAFLSCLDDGPTASPPRAAPPPSPALSARDLYSFICSGPLVDRIGYTKEKVADSIGRWL
RCGVDVARLLRLDELQLSEAEKARVYQFYIPVFLWCEDQVIEHRAKYSEGDDIPPLVIGV
SAPQGSGKTTLVFALDYLFQVAGRKSATLSIDDFYLTAKEQNELRDRYPGNALLELRGNA
GSHNLQFSVETLESLMKLTKEGIKMKVPRYDKSAFGGRGDRADPSVWPEVEGPLELEVVN
NNLEAYYDAWDRFIDSWIVIKIREPSSVYQWRLQAEIAMRADGKPGMSDEEVRSLTKLFA
P

Transcript Sequence

Transcript ID

Zm00001d043841_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:211611084:211613691:-1 gene:Zm00001d043841 gene_biotype:protein_coding transcript_biotype:protein_coding description:Katanin p60 ATPase-containing subunit A1
Sequence

ATTTTTTCTATCTCTCTCCCTTTTGATATTTTTCCAGCTGTCCACCACCTCCCTCGCTCG
AGTACATTTTGTTACTATTATTTGATTATTTCTGCCCTTGGTATACAATGTTCGATGATG
CGCTATAAACAAAAAAATATCCCGCACCCACTCTGTCGCTAAACTAATATACTGGAGAAC
CGATCTTCTGTTAGCCGCTCCTACTAATATACTGGTTAGCCGATCGATTGTTCAGGTCCT
CGGATCTTGACTGTATGGATGCGTTCTTGTCATGCCTGGACGACGGCCCGACGGCTTCGC
CGCCGCGCGCCGCCCCGCCGCCATCCCCGGCGCTTAGCGCGCGGGACCTCTACAGCTTCA
TATGCAGCGGTCCACTGGTGGACAGGATCGGCTATACCAAAGAGAAGGTCGCCGACTCCA
TCGGCCGGTGGCTTCGCTGCGGGGTTGACGTGGCGCGCCTCCTCCGCCTCGACGAGCTCC
AGCTGTCGGAGGCCGAGAAGGCCCGGGTTTACCAGTTCTACATCCCCGTCTTCCTCTGGT
GCGAGGACCAGGTCATAGAGCACAGAGCCAAGTACAGCGAGGGCGACGACATCCCGCCAT
TGGTGATCGGGGTCAGCGCTCCCCAAGGAAGTGGAAAGACGACTCTGGTCTTCGCACTTG
ATTATCTTTTTCAGGTTGCTGGTAGGAAATCCGCCACATTGTCTATAGATGACTTCTATT
TGACAGCAAAAGAGCAGAATGAACTGAGGGACAGATACCCTGGAAATGCTCTTTTGGAGC
TCCGTGGAAATGCTGGAAGCCACAATCTCCAATTCAGTGTTGAAACACTTGAGTCACTGA
TGAAACTAACAAAAGAAGGCATCAAGATGAAGGTTCCACGGTATGACAAGTCTGCTTTTG
GGGGAAGAGGTGATCGTGCTGATCCTTCTGTGTGGCCGGAGGTTGAAGGGCCGTTAGAGC
TCGAGGTGGTTAACAACAACCTTGAAGCATACTATGACGCTTGGGACAGGTTCATCGACT
CGTGGATCGTTATAAAAATAAGAGAACCTAGTTCTGTCTATCAGTGGAGGCTGCAGGCGG
AGATAGCTATGAGAGCAGATGGAAAACCTGGAATGTCTGATGAGGAGGTGCGTTCTCTGA
CAAAACTATTCGCTCCTTAG