Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043815_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:3:210944628:210954298:-1 gene:Zm00001d043815 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methionyl-tRNA formyltransferase
Sequence

ATGGCACGGTACTCCCCACCGTCGCTGCGCTGCTTCTTCCGCTGCGCCGCCAGCTCCGCC
TCCCGAGCCGTAGGCAGCGGCACTCGGAAGAAGAACCTTGTATTCTTGGGCTCTCCCCAG
GTCGCCGCCTCGGTCCTGGACAAGCTGCTGGGCGCGTCCGGCTCCCCGGAATCCGCATTT
CAGGTGGCTGCCGTCGTGACGCAGCCGCCGGCCGCCAAGAACAGGGGGAGGAAGTTGATG
CCGTCGGCCGTCGCGCAGTTAGCGCTCGATCGCGGGTTCCCAGAGGAACTCATCTTCACG
CCAGAACGAGCCCGAGAAGAGTCGTTCCTGTCGGCCTTGAAGGAAGTGGAACCGGATGTT
TGCATAACTGCTGCTTACGGGAACATTCTGCCCCAGAAATTTCTTGATATCCCATCGTGC
GGCACAGTTAATATACACCCAAGTTTGTTGCCTCTATATCGTGGTGCAGCTCCTGTGCAG
AGGGCACTGCAGGATGGTGTTGCAGAAACAGGTGTTTCCCTTGCATATACTGTCCGTGCA
TTGGATGCAGGTCCAGTGATTGCGTGTGAAAGGTTTTCTGTTGATGAATGTATTAAGGCA
CCAGAGCTACTTTCTATGCTGTTTCATTTAGGATCCAAGCTATTGATTAATGAACTTCCA
TCCATTCTTGATGGTTCGGCTAAAGATAAGGCACAACCACAGGATGACTCCAAAGCTACA
CTGGCACCAAAGTTAAATTCTGAGGAGTCATGGCTATCGTTTGACGAAGAAGCTAAAGTG
CTGCATAACAAGGTGCGGGCATTTGCAGGATGGCCTGGGACGCGCGCAAAGCTGCAACTC
ATAAACCAAAACAGTGTACCCGATGTACTAGAGATTAAGGTTATCAGCACGAAGGTTTCA
ACATCATGTGTCAAAGTTGGAGATGAAAACGAGATACTATTCTCTGGGAGCTCGTTGCTG
ATTCCTTGCAGTGGTTCGACCTGGCTCGAGGTGTTGGAGCTTCAACTCCCTGGAAAGAAA
GTAACAAAGGCACAAGATTTTTGGAATGGTTTGCGTGGTCAGAAGCTGATGAAATTGCCA
TAG

Peptide Sequence

PEP ID

Zm00001d043815_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:3:210944628:210954298:-1 gene:Zm00001d043815 transcript:Zm00001d043815_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methionyl-tRNA formyltransferase
Sequence

MARYSPPSLRCFFRCAASSASRAVGSGTRKKNLVFLGSPQVAASVLDKLLGASGSPESAF
QVAAVVTQPPAAKNRGRKLMPSAVAQLALDRGFPEELIFTPERAREESFLSALKEVEPDV
CITAAYGNILPQKFLDIPSCGTVNIHPSLLPLYRGAAPVQRALQDGVAETGVSLAYTVRA
LDAGPVIACERFSVDECIKAPELLSMLFHLGSKLLINELPSILDGSAKDKAQPQDDSKAT
LAPKLNSEESWLSFDEEAKVLHNKVRAFAGWPGTRAKLQLINQNSVPDVLEIKVISTKVS
TSCVKVGDENEILFSGSSLLIPCSGSTWLEVLELQLPGKKVTKAQDFWNGLRGQKLMKLP

Transcript Sequence

Transcript ID

Zm00001d043815_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:210944628:210954298:-1 gene:Zm00001d043815 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methionyl-tRNA formyltransferase
Sequence

ACCAATCTTTTCTTTCCAGCCTCAAATCCCGTTTTTCCCATCCCGTGAAGAACCATGGCA
CGGTACTCCCCACCGTCGCTGCGCTGCTTCTTCCGCTGCGCCGCCAGCTCCGCCTCCCGA
GCCGTAGGCAGCGGCACTCGGAAGAAGAACCTTGTATTCTTGGGCTCTCCCCAGGTCGCC
GCCTCGGTCCTGGACAAGCTGCTGGGCGCGTCCGGCTCCCCGGAATCCGCATTTCAGGTG
GCTGCCGTCGTGACGCAGCCGCCGGCCGCCAAGAACAGGGGGAGGAAGTTGATGCCGTCG
GCCGTCGCGCAGTTAGCGCTCGATCGCGGGTTCCCAGAGGAACTCATCTTCACGCCAGAA
CGAGCCCGAGAAGAGTCGTTCCTGTCGGCCTTGAAGGAAGTGGAACCGGATGTTTGCATA
ACTGCTGCTTACGGGAACATTCTGCCCCAGAAATTTCTTGATATCCCATCGTGCGGCACA
GTTAATATACACCCAAGTTTGTTGCCTCTATATCGTGGTGCAGCTCCTGTGCAGAGGGCA
CTGCAGGATGGTGTTGCAGAAACAGGTGTTTCCCTTGCATATACTGTCCGTGCATTGGAT
GCAGGTCCAGTGATTGCGTGTGAAAGGTTTTCTGTTGATGAATGTATTAAGGCACCAGAG
CTACTTTCTATGCTGTTTCATTTAGGATCCAAGCTATTGATTAATGAACTTCCATCCATT
CTTGATGGTTCGGCTAAAGATAAGGCACAACCACAGGATGACTCCAAAGCTACACTGGCA
CCAAAGTTAAATTCTGAGGAGTCATGGCTATCGTTTGACGAAGAAGCTAAAGTGCTGCAT
AACAAGGTGCGGGCATTTGCAGGATGGCCTGGGACGCGCGCAAAGCTGCAACTCATAAAC
CAAAACAGTGTACCCGATGTACTAGAGATTAAGGTTATCAGCACGAAGGTTTCAACATCA
TGTGTCAAAGTTGGAGATGAAAACGAGATACTATTCTCTGGGAGCTCGTTGCTGATTCCT
TGCAGTGGTTCGACCTGGCTCGAGGTGTTGGAGCTTCAACTCCCTGGAAAGAAAGTAACA
AAGGCACAAGATTTTTGGAATGGTTTGCGTGGTCAGAAGCTGATGAAATTGCCATAGGGG
GATATCTGCATTCGCAGCACAGGAGTGTGCCTATATGCATAGCAAGGGTTATTGAGGTCA
GTCATTGCGCGAACATAAGCAGGGTAGTGCTAGAAGCCTATATGCGGAGATCTCGGTTTT
ATGACTACCTTTTCCTTCTGGTAAACTTGGTGCTATAAACTCGTAACTCAGTTACATTAG
GCATGCCATTTGTATTGCTTCCTCAATTTCAGAAAACACACTGCTGTAACTATTTCAGTT
ATTCAATTTTTCACTGTCATAACTGAGCTACAAACATTTGAGAAATAATACAGTTATGTG
GTGAGTAATAAGGCAATAATTTGCCGTACCTTC