Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043778_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:209949057:209951249:-1 gene:Zm00001d043778 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat protein152 description: pentatricopeptide repeat protein152
Sequence	ATGCTACGCTGCACGCGCTACTCGCTCCAGCTGCTCCAACCCCATCCCTCCTTCCCCGGT GGCGCCACCTGCTCTTGCTCATGCCCGTGCTCCCCGCCTTCTTCCTCCTTCGGCAACCAG CACCAGAGGCTCCATCAGCCAGCCGCTCTGTCCCCAGCTACTTCCCGCTCCAGCACACCA CTCACCCACGCGCCTGACCATGACGAAGATGGTCCCTCCGACGACGCCCTCCTGGCGCTC CTCCGCGCCCATGACACCGATGCCGCCTACAGCCTCTTCTCCTCGAAGCCGTCTCTCCTC CCTTCCTCCCCCACCACGGCGTCTCGCCTCCTCGCGCAGCTCTCCTTCAATTCCAACGGC CCCGATGGGTTTCCCCGCGCCGCCCGCCTCCTCCAGAGCCTCCGCGCCCGCGGTGCCCTC GACCTCCTCGACGCCAACTCCCTCTCCCTCGCGGCCGCGGCAGCCGCCCGCTGCCGTGAC GCCCGTCTCGCCCATTCCCTCCTCCTCTACATGCTCCGCCAGGGCCTCCTCCCCGACCGA CGCGCATACACCGCCGCCGTCTCCCGCCTCACGCCGCCCACCAAGGCGCTCCGCCTCTTC GACGCCGTCCTCCGCAACCTCCGCAGCGCACCACCAGAGCTCGTCTCCCCCTCCTGCCTC CCCGACGCGGCCGCATTCAACGCAGCCCTCAGCGCCTGCGCTGACGCGGGGGATTGCCGC CGATTCCGGCAGCTGTTCGACGCAATGAGCGAATGGAGCGCCGCCGCCGATGCGCTCACC TACAACGTCGTCATCAAGATGTGCGCGCGCGCCGGCCGAAAGGACCTCGTCGCGCGCGTG CTTGAGCGCATGCTCTTCTCCGGCCTCACCCCCTGCGCCACCACTTTCCACTCCCTCGTC GCCGCGTTCGTCGGCTTCGGTGACATCGCCACAGCGGAGAGGATCGTCCAGGCGATGCGG GAAGAGCGCAAAGACATATGCTTACTGCTCAGGGCTGTCTCTATGGACTGCGACGGTGTG ACCGACGTCGAGGAGGGTGCCGTGCTGCTCGACGACATTGTTGCCGGGGCCAAACAGGGA CAGGGCTCGGATGAGGTGCCGCTGCTCCCCAAGGCTTATCCGCCCAACGCCAGGGTGTAC ACCACGCTCATGAAGGGGTACACGAACGCAGGCCGCGTCGACGATGTCCTGGCCGTGCTG CGCGCGATGCGGCAAGAGGCGCAGACGGCACCCGCAAGCCGGCCGGACCATGTGACTTAC ACGACGGTGATATCAGCGCTTGTTGGTGCGGGCGACATGGCGCGCGCGCGCGCCGTGCTG AACGAGATGGCTGCGGCCAGAGTTCCAGCCAACCGTGTCACCTACAACGTCCTGCTCAAG GGCTACTGCCAGCAGCTGCAGATTGGCCAGGCCAGGGAGCTCTTTGAGGAGATGGTGACG GACGCCGGCATCCAGCCCGGCGTGGTGACGTACAACACCCTCATGGACGGGTGCGTTCTC ACGGACGACAGCGCGGGCGCGCTAGCCTTCTTCAACGAGATGCGGTCACGGGGCATCGCG CCGTCCACTGTGAGCTACACGACGTTGATGAAGGCGTTCGCCGTGTCGGGGCAGCCCAAG GTAGCGCACAAGGTGTTCGAGGAGATGGAGCGGGACCCCAGGGTGACGGTGGACAGAGCG GCGTGGAACATGCTGGTGGAGGGGTACTGCCGGCTGGGACTAGTGGAGACAGCGAAGCAG GTTGTGGAGAGGATGAAGGAGCGCGGCGTGCAGCCGGACGTGGCGACGTACGGCAGCATG GCGAAGGGCATCGCGGTGGCGCGCAAGCCAGGGGAGGCTCTTGTGCTCTGGAACGAGGTG AAGGAGCGGTGCCTGAAGGAGGCCGACGAGGAACTGCTGGGGGCGCTGGCGGACGTGTGC GTGAGGGCGGCCTTCTTCAAGAAGGCGCTGGAGATCGTGGCGTGCATGGAGGAGAAGGGC ATCGCTCCCAACAAGACCAAGTACAAGAAGATGTACATTGAGATGCACTCCAGGATGTTC ACCAGCAAGCATGCATCGCAAGCGCGCCAGGACCGGCGCCGAGAGCGCAAGCGTGCCGCC GAGGCCTTCAAGTTCTGGCTTGGCCTGCCCAACTCCTACTATGGCAGCGAGTGGCAGATC GAGCCTCTGCTGGATGGCGATGACCTAAGTTGA

Peptide Sequence

PEP ID	Zm00001d043778_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:209949057:209951249:-1 gene:Zm00001d043778 transcript:Zm00001d043778_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat protein152 description: pentatricopeptide repeat protein152
Sequence	MLRCTRYSLQLLQPHPSFPGGATCSCSCPCSPPSSSFGNQHQRLHQPAALSPATSRSSTP LTHAPDHDEDGPSDDALLALLRAHDTDAAYSLFSSKPSLLPSSPTTASRLLAQLSFNSNG PDGFPRAARLLQSLRARGALDLLDANSLSLAAAAAARCRDARLAHSLLLYMLRQGLLPDR RAYTAAVSRLTPPTKALRLFDAVLRNLRSAPPELVSPSCLPDAAAFNAALSACADAGDCR RFRQLFDAMSEWSAAADALTYNVVIKMCARAGRKDLVARVLERMLFSGLTPCATTFHSLV AAFVGFGDIATAERIVQAMREERKDICLLLRAVSMDCDGVTDVEEGAVLLDDIVAGAKQG QGSDEVPLLPKAYPPNARVYTTLMKGYTNAGRVDDVLAVLRAMRQEAQTAPASRPDHVTY TTVISALVGAGDMARARAVLNEMAAARVPANRVTYNVLLKGYCQQLQIGQARELFEEMVT DAGIQPGVVTYNTLMDGCVLTDDSAGALAFFNEMRSRGIAPSTVSYTTLMKAFAVSGQPK VAHKVFEEMERDPRVTVDRAAWNMLVEGYCRLGLVETAKQVVERMKERGVQPDVATYGSM AKGIAVARKPGEALVLWNEVKERCLKEADEELLGALADVCVRAAFFKKALEIVACMEEKG IAPNKTKYKKMYIEMHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGLPNSYYGSEWQI EPLLDGDDLS

Transcript Sequence

Transcript ID	Zm00001d043778_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:209949057:209951249:-1 gene:Zm00001d043778 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat protein152 description: pentatricopeptide repeat protein152
Sequence	ATGCTACGCTGCACGCGCTACTCGCTCCAGCTGCTCCAACCCCATCCCTCCTTCCCCGGT GGCGCCACCTGCTCTTGCTCATGCCCGTGCTCCCCGCCTTCTTCCTCCTTCGGCAACCAG CACCAGAGGCTCCATCAGCCAGCCGCTCTGTCCCCAGCTACTTCCCGCTCCAGCACACCA CTCACCCACGCGCCTGACCATGACGAAGATGGTCCCTCCGACGACGCCCTCCTGGCGCTC CTCCGCGCCCATGACACCGATGCCGCCTACAGCCTCTTCTCCTCGAAGCCGTCTCTCCTC CCTTCCTCCCCCACCACGGCGTCTCGCCTCCTCGCGCAGCTCTCCTTCAATTCCAACGGC CCCGATGGGTTTCCCCGCGCCGCCCGCCTCCTCCAGAGCCTCCGCGCCCGCGGTGCCCTC GACCTCCTCGACGCCAACTCCCTCTCCCTCGCGGCCGCGGCAGCCGCCCGCTGCCGTGAC GCCCGTCTCGCCCATTCCCTCCTCCTCTACATGCTCCGCCAGGGCCTCCTCCCCGACCGA CGCGCATACACCGCCGCCGTCTCCCGCCTCACGCCGCCCACCAAGGCGCTCCGCCTCTTC GACGCCGTCCTCCGCAACCTCCGCAGCGCACCACCAGAGCTCGTCTCCCCCTCCTGCCTC CCCGACGCGGCCGCATTCAACGCAGCCCTCAGCGCCTGCGCTGACGCGGGGGATTGCCGC CGATTCCGGCAGCTGTTCGACGCAATGAGCGAATGGAGCGCCGCCGCCGATGCGCTCACC TACAACGTCGTCATCAAGATGTGCGCGCGCGCCGGCCGAAAGGACCTCGTCGCGCGCGTG CTTGAGCGCATGCTCTTCTCCGGCCTCACCCCCTGCGCCACCACTTTCCACTCCCTCGTC GCCGCGTTCGTCGGCTTCGGTGACATCGCCACAGCGGAGAGGATCGTCCAGGCGATGCGG GAAGAGCGCAAAGACATATGCTTACTGCTCAGGGCTGTCTCTATGGACTGCGACGGTGTG ACCGACGTCGAGGAGGGTGCCGTGCTGCTCGACGACATTGTTGCCGGGGCCAAACAGGGA CAGGGCTCGGATGAGGTGCCGCTGCTCCCCAAGGCTTATCCGCCCAACGCCAGGGTGTAC ACCACGCTCATGAAGGGGTACACGAACGCAGGCCGCGTCGACGATGTCCTGGCCGTGCTG CGCGCGATGCGGCAAGAGGCGCAGACGGCACCCGCAAGCCGGCCGGACCATGTGACTTAC ACGACGGTGATATCAGCGCTTGTTGGTGCGGGCGACATGGCGCGCGCGCGCGCCGTGCTG AACGAGATGGCTGCGGCCAGAGTTCCAGCCAACCGTGTCACCTACAACGTCCTGCTCAAG GGCTACTGCCAGCAGCTGCAGATTGGCCAGGCCAGGGAGCTCTTTGAGGAGATGGTGACG GACGCCGGCATCCAGCCCGGCGTGGTGACGTACAACACCCTCATGGACGGGTGCGTTCTC ACGGACGACAGCGCGGGCGCGCTAGCCTTCTTCAACGAGATGCGGTCACGGGGCATCGCG CCGTCCACTGTGAGCTACACGACGTTGATGAAGGCGTTCGCCGTGTCGGGGCAGCCCAAG GTAGCGCACAAGGTGTTCGAGGAGATGGAGCGGGACCCCAGGGTGACGGTGGACAGAGCG GCGTGGAACATGCTGGTGGAGGGGTACTGCCGGCTGGGACTAGTGGAGACAGCGAAGCAG GTTGTGGAGAGGATGAAGGAGCGCGGCGTGCAGCCGGACGTGGCGACGTACGGCAGCATG GCGAAGGGCATCGCGGTGGCGCGCAAGCCAGGGGAGGCTCTTGTGCTCTGGAACGAGGTG AAGGAGCGGTGCCTGAAGGAGGCCGACGAGGAACTGCTGGGGGCGCTGGCGGACGTGTGC GTGAGGGCGGCCTTCTTCAAGAAGGCGCTGGAGATCGTGGCGTGCATGGAGGAGAAGGGC ATCGCTCCCAACAAGACCAAGTACAAGAAGATGTACATTGAGATGCACTCCAGGATGTTC ACCAGCAAGCATGCATCGCAAGCGCGCCAGGACCGGCGCCGAGAGCGCAAGCGTGCCGCC GAGGCCTTCAAGTTCTGGCTTGGCCTGCCCAACTCCTACTATGGCAGCGAGTGGCAGATC GAGCCTCTGCTGGATGGCGATGACCTAAGTTGA