Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043731_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:208601277:208604025:-1 gene:Zm00001d043731 gene_biotype:protein_coding transcript_biotype:protein_coding description:Subtilisin-like protease SBT5.3
Sequence	ATGAAGGCGTCGGGCGCGCTGGGCGACGGGGGGACGCCGCCGCCGAGCCAGGCGGACCTG TCGTCGCCGCGGGACTACGTGGGGCACGGCTCGCACACGCTGTCCACCGCGGGCGGCTCG CTCGTCCCGGGCGCCAGCGTGCTGGGCCACCACGGCAGGGGCGTGGCGGCGGGCGGCTCG CCCGGCGCGCGCGTGGCCGCGTACAAGGCGTGCTACGGGCCGGGCTGCTCCGGCGTCGAC ATCCTCGCCGCCATCGTCGCGGCGGTGGCCGACGGCGTGCACGTGCTCTCCCTCTCCCTC GGCGCGCCGCCCGCCGACTACCTCACGGACCTGACCGCCCTCGGCGCCTTCTTCGCGGTG CAGAGCGGGGTCACCGTCGTCTGCGCGGCCGGCAACTCCGGCCCGCAGCCGAGCACCGCT ACCAACCTTGCCCCGTGGATCCTGACGGTCGGCGCGAGCACCATGGACAGGGATTTCCCA GCTAATGTCAGCTTCAATGGAGACACCATCCAGGGACAAAGCCTCGCAGACAGCACTCTG CCCATTGGCCAGCCGTATCCGATTATCAGCGGGGGGAAGGCCAACGCCGCGAACCAGCCA ACCGGAAACTCGTGCGCATCTGATTCACAGCCTGCTGTTTGTTGTTCGGATCGACGTGTC CCGTACGAACTGAACGTCCTCCTTGTGCCTGCCTGCCTGCCTGCCTGCAGGTCGCTGTGC TTGCCCAGCTCTCTGGACCCTGCCAAGGTGAAGGGCAAGATCGTCGTCTGCGTCAGAGGG GTGAACGCCAGAGCGGAGAAGGGGTTCGTGGTCAAACAGGCGGGCGGCGTCGGCATGGTC CTCTGCAACGACGCCAGCACCGGGGACACCGTGGTCGCCGACGCGCACGTCCTCGCGGCG GCTCACTGCTCCTATTCGCAGTGCGTCCGGCTCTTCAACTACCTCCAGTCTACCAACGAT CCGTTGGGCTACATCAATGCGACAGACGCGAGCTTTGGCGTGAAACCTGCGCCGAAGATT GCAGCGTTCTCGTCCCGGGGACCAAACGCCATTACTCCTCAGATCCTCAAGCCAGACATC ACCGCACCGGGTGTCAGCGTGATCGCCGCGTACAGCGGCGCGGTCTCGCCAACGGAGCTC CCGTTCGATGACCGCCGTGTCCCCTACAACATAATGTCCGGCACCTCCATGTCGTGCCCC CACGTCGCTGGCATCGTCGGCCTCCTCAAGACGAAGTACCCAGCTTGGAGCCCCGCCATG ATCAAGTCGGCAATCATGACCACCGCGAACACCACGGCCAACGACGGCAACCCGATCCAA GACGAGACCGGCGCCGTCGCCACGCCGTTCGGCTACGGGTCTGGGCACGTGGACCCCGTC AAGGCGCTGGACCCGGGGCTGGTGTACGACACCACGCTGCTCGACTACACCAACTTCCTC TGCTCACTGAAGCCCACGCAGAACCCGCTTCCGAGCCTCCCGGTCGACCTCCTCCCGCTC CTGGGCAACCTCTCCCAGCCTCTCGTCGGCCTCCTGCTCCCACTGTTCGACGCCGCCGGC GAGCCGTGCAAGTGTAGCAAGGGCCCGTACGGCCGCCCCGAGGACCTGAACTACCCATCC ATCGCCGTGCCGTGCCTGTCCGGCAGCGCCACGGTGAAGCGCCGCCTCAAGAACGTCGGC GCGCCCGGCAAGTACAGGGTTAAAGTCACGGAGCCCGCGGGGATCAAGGTCACCGTAGTG CCGAGCGAATTGTACTTCGGGGTCGGAGAGGAGAAGGAGTTCACGGTGAAGATGGACGTG GACGTCAACGCCCCGGCGGCTAATAATGACTACGTGTTCGGCAGTGTTGTGTGGTCGGAT GCGGCCGCGTACGCGTCGGACGTGAGCAAGGCCCATCGCGTCCGGAGCCCCGTCGTGGTT AAGACCAAGTGCGGCTAG

Peptide Sequence

PEP ID	Zm00001d043731_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:208601277:208604025:-1 gene:Zm00001d043731 transcript:Zm00001d043731_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Subtilisin-like protease SBT5.3
Sequence	MKASGALGDGGTPPPSQADLSSPRDYVGHGSHTLSTAGGSLVPGASVLGHHGRGVAAGGS PGARVAAYKACYGPGCSGVDILAAIVAAVADGVHVLSLSLGAPPADYLTDLTALGAFFAV QSGVTVVCAAGNSGPQPSTATNLAPWILTVGASTMDRDFPANVSFNGDTIQGQSLADSTL PIGQPYPIISGGKANAANQPTGNSCASDSQPAVCCSDRRVPYELNVLLVPACLPACRSLC LPSSLDPAKVKGKIVVCVRGVNARAEKGFVVKQAGGVGMVLCNDASTGDTVVADAHVLAA AHCSYSQCVRLFNYLQSTNDPLGYINATDASFGVKPAPKIAAFSSRGPNAITPQILKPDI TAPGVSVIAAYSGAVSPTELPFDDRRVPYNIMSGTSMSCPHVAGIVGLLKTKYPAWSPAM IKSAIMTTANTTANDGNPIQDETGAVATPFGYGSGHVDPVKALDPGLVYDTTLLDYTNFL CSLKPTQNPLPSLPVDLLPLLGNLSQPLVGLLLPLFDAAGEPCKCSKGPYGRPEDLNYPS IAVPCLSGSATVKRRLKNVGAPGKYRVKVTEPAGIKVTVVPSELYFGVGEEKEFTVKMDV DVNAPAANNDYVFGSVVWSDAAAYASDVSKAHRVRSPVVVKTKCG

Transcript Sequence

Transcript ID	Zm00001d043731_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:208601277:208604025:-1 gene:Zm00001d043731 gene_biotype:protein_coding transcript_biotype:protein_coding description:Subtilisin-like protease SBT5.3
Sequence	GGCGTATGGCCGGAATCCCTGAGCTTCCAAAACGATACCATGCCAAACGCCCCATTGGGT TGGTGCGGCCCCTGCGAGAAAGGCAACGACACAACCTTCCAATGCAACAGGTAGGGCAGG CCGGGTATTTGCCTGCGAGAAAGGCAAATAACTAGGCAGCACAGCACAGGAATCGGGATC CCCGTTCTCCCGCAGGCCGGGGCCAAACTGACTGACGATGGTTCGTACTACGTACACGCA CGCACAGGAAGCTGATCGGCGCGAGGTTCTTCAGCGAAGGCATGAAGGCGTCGGGCGCGC TGGGCGACGGGGGGACGCCGCCGCCGAGCCAGGCGGACCTGTCGTCGCCGCGGGACTACG TGGGGCACGGCTCGCACACGCTGTCCACCGCGGGCGGCTCGCTCGTCCCGGGCGCCAGCG TGCTGGGCCACCACGGCAGGGGCGTGGCGGCGGGCGGCTCGCCCGGCGCGCGCGTGGCCG CGTACAAGGCGTGCTACGGGCCGGGCTGCTCCGGCGTCGACATCCTCGCCGCCATCGTCG CGGCGGTGGCCGACGGCGTGCACGTGCTCTCCCTCTCCCTCGGCGCGCCGCCCGCCGACT ACCTCACGGACCTGACCGCCCTCGGCGCCTTCTTCGCGGTGCAGAGCGGGGTCACCGTCG TCTGCGCGGCCGGCAACTCCGGCCCGCAGCCGAGCACCGCTACCAACCTTGCCCCGTGGA TCCTGACGGTCGGCGCGAGCACCATGGACAGGGATTTCCCAGCTAATGTCAGCTTCAATG GAGACACCATCCAGGGACAAAGCCTCGCAGACAGCACTCTGCCCATTGGCCAGCCGTATC CGATTATCAGCGGGGGGAAGGCCAACGCCGCGAACCAGCCAACCGGAAACTCGTGCGCAT CTGATTCACAGCCTGCTGTTTGTTGTTCGGATCGACGTGTCCCGTACGAACTGAACGTCC TCCTTGTGCCTGCCTGCCTGCCTGCCTGCAGGTCGCTGTGCTTGCCCAGCTCTCTGGACC CTGCCAAGGTGAAGGGCAAGATCGTCGTCTGCGTCAGAGGGGTGAACGCCAGAGCGGAGA AGGGGTTCGTGGTCAAACAGGCGGGCGGCGTCGGCATGGTCCTCTGCAACGACGCCAGCA CCGGGGACACCGTGGTCGCCGACGCGCACGTCCTCGCGGCGGCTCACTGCTCCTATTCGC AGTGCGTCCGGCTCTTCAACTACCTCCAGTCTACCAACGATCCGTTGGGCTACATCAATG CGACAGACGCGAGCTTTGGCGTGAAACCTGCGCCGAAGATTGCAGCGTTCTCGTCCCGGG GACCAAACGCCATTACTCCTCAGATCCTCAAGCCAGACATCACCGCACCGGGTGTCAGCG TGATCGCCGCGTACAGCGGCGCGGTCTCGCCAACGGAGCTCCCGTTCGATGACCGCCGTG TCCCCTACAACATAATGTCCGGCACCTCCATGTCGTGCCCCCACGTCGCTGGCATCGTCG GCCTCCTCAAGACGAAGTACCCAGCTTGGAGCCCCGCCATGATCAAGTCGGCAATCATGA CCACCGCGAACACCACGGCCAACGACGGCAACCCGATCCAAGACGAGACCGGCGCCGTCG CCACGCCGTTCGGCTACGGGTCTGGGCACGTGGACCCCGTCAAGGCGCTGGACCCGGGGC TGGTGTACGACACCACGCTGCTCGACTACACCAACTTCCTCTGCTCACTGAAGCCCACGC AGAACCCGCTTCCGAGCCTCCCGGTCGACCTCCTCCCGCTCCTGGGCAACCTCTCCCAGC CTCTCGTCGGCCTCCTGCTCCCACTGTTCGACGCCGCCGGCGAGCCGTGCAAGTGTAGCA AGGGCCCGTACGGCCGCCCCGAGGACCTGAACTACCCATCCATCGCCGTGCCGTGCCTGT CCGGCAGCGCCACGGTGAAGCGCCGCCTCAAGAACGTCGGCGCGCCCGGCAAGTACAGGG TTAAAGTCACGGAGCCCGCGGGGATCAAGGTCACCGTAGTGCCGAGCGAATTGTACTTCG GGGTCGGAGAGGAGAAGGAGTTCACGGTGAAGATGGACGTGGACGTCAACGCCCCGGCGG CTAATAATGACTACGTGTTCGGCAGTGTTGTGTGGTCGGATGCGGCCGCGTACGCGTCGG ACGTGAGCAAGGCCCATCGCGTCCGGAGCCCCGTCGTGGTTAAGACCAAGTGCGGCTAGC GGACTAGCAGAGCACACAAGGCATGCTCATTGCTCGATTAAGAACACTCCTAAAGATTCT TCCAAAAGCTAATGTAATTGGTAAACTAGCAACT