Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043721_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:208292239:208298368:-1 gene:Zm00001d043721 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloride channel protein CLC-e
Sequence	ATGGCGGCATTCGCAGCCCCCTCCTTGTCCTCGCTCATCCTCCTCGCCTCGCCCCACTCC GCGCCCACTCTCCTCCGCCTGCGCCGCGCGGGCGGCCGCTCTCTGGAGCTGTCGTCACGG CGCGGCGGGAGCGCGCGCCTTCGGGTCGTTCGACGAGCGGTGACGGAGGAGGAGAGCGAG GCCGCGCGCGGAGACGAGGAGGTGGAGGAGGCCCCGGAGGAGCCAGTGGCTGGCCGCGAC CTCGTCACGCTCGCCGCCTGCCTCGTGGGCCTCCTCACCGGCGTCTCCATCGTGCTCTTC AACCTCTCGGTTCATGAAATACGTGACGTATTTTGGGACGGTATTCCTTTGCGAGGCGCT TCATGGCTGAGGGAAGAACCGATTGGTGAAGTCTGGCAGAGAGTGATATTTGTTCCGGTC AGTGGAGGTGTTATAGTGGGTGGATTGAACGCTCTAAGAAGTCAGATAGAAACTAACTCA GATGCCCCTGTGTCCAAGATAAAGAGTGCATTTAGACCATTCTTGAAAGCTGTGGCAGCA TCTTTCACTCTTGGAACTGGCAATTCACTGGGTCCTGAGGGTCCCAGTGTGGAAATTGGT TCTGCAATAGCCAAAGGATTTGGTGATGTATTTGAGTGGGACGGTGGGAAAAGGCTGTCT CTTGTGGCAGCTGGGTCAGCAGCTGGGCTTTCATCTGGTTTTAATGCTGCTGTTGCTGGG TGTTTTTTTGCTGTGGAATCTGTTTTGTGGCCTTCTGCGGATTCCTCATCCCTTGCCAAC TCGACACCTATGGTGATACTCAGTTCAGTGATAGCATCTGTTGTTTCAGAGATTGGTCTA GGTTCTGATCCCGCTTTCACTGTTCCGGAATATGATTTTCGCTCCCCAACAGAACTTCCT CTATACCTTTTGCTGGGTGTCTTCTGCGGGTTGGTGTCAATTGCATTATCAAGATGTACA TCACTTGCTATGAAGGCAGTTGAAAGTTTACAAAGGACAACAGGGTTACCGAAGGCTGCA TCTCCGGCTTTAGGTGGCCTCATTGTTGGTCTCCTTGCACTTTTGTACCCTGAAGTATTG TACTGGGGCTTTGAAAATGTTGATATCTTGCTGGAATCACGGCCATTTACAAGCGGCCTC TCAACGACCATATTGGTTCAGCTTATTGGAGTGAAAATATTAGCAACATCTTTGTGCAGG GCTTCTGGATTGGTTGGTGGTTATTATGCACCATCTCTTTTTATTGGTGCAGCTACAGGG ATGGCATATGGCAAATTCATGAAGTTTACATTTACTGGCCCTGAACCATTGCTGCATGTC CCATTCTTAGATGTGGCATCACCTCAAGCATATGGCCTGGTAGGTATGGCAGCTACCCTC GCCGGTGTATGCAAGGTGCCTCTGACATCTGTCCTACTACTTTTTGAGCTTACACAAGAC TATCGTATAGTTCTACCTTTGCTCGGGGCTGTTGGGTTATCATCCTGGATTGCTTCTCCT CAAAGGTTCTCTAAAAGAATTAGGAGTAAGCTGGATTCTTGGGAGGATAAATCGAGTATT CCTCAGCAAGCAAACGACATGCTCACTGAAAACAAAGAGGCCACTTCCATGGATGCAGCT GATTTGTCGTTAGAATTATATAAAATTGAAAGCTCCCTTTGTGTCTATGATGCCAACGAC AGCAATATGTTCAAAAATCTTACTGTTGGTGAGGCCATGAAAACTAACTACTTCTCTGTC TCAATGACAACCCCATTAATTGAGGCACTAGATCTTATGCTTGCCGAGAAGCAGCCCTTT GTTATGATAACTGAGAATAACACATCTGCAAGAGGCTTGCTGGCACTAAAGAATATCCAA GATTTTTGCAAAGCTGCAAAAACTACCAGATCACAAGCTGAGGTAAAGGAACTCCTGATA TCTCATGTTTGCCAAGCAGGCAAGTGTAAATCGTGGTCTGTGACGCCTCAGATGCCACTT ACTACTGCAGAGAAGATTATGGACTCTCATGATGTGGATCACCTACCTGTAGTTTCTGAG GATGCTAATCTTCAGGACAGAGGACTTTTGATAGGTTTTGTAGACCGAGAATGCATTGCC ATTGCTCGAAGAGCCATGGCAACAAAAGAAATTTTCAGTTCTATGTATGGGATCAGGAAG GAAGAGAGGTAG

Peptide Sequence

PEP ID	Zm00001d043721_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:208292239:208298368:-1 gene:Zm00001d043721 transcript:Zm00001d043721_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloride channel protein CLC-e
Sequence	MAAFAAPSLSSLILLASPHSAPTLLRLRRAGGRSLELSSRRGGSARLRVVRRAVTEEESE AARGDEEVEEAPEEPVAGRDLVTLAACLVGLLTGVSIVLFNLSVHEIRDVFWDGIPLRGA SWLREEPIGEVWQRVIFVPVSGGVIVGGLNALRSQIETNSDAPVSKIKSAFRPFLKAVAA SFTLGTGNSLGPEGPSVEIGSAIAKGFGDVFEWDGGKRLSLVAAGSAAGLSSGFNAAVAG CFFAVESVLWPSADSSSLANSTPMVILSSVIASVVSEIGLGSDPAFTVPEYDFRSPTELP LYLLLGVFCGLVSIALSRCTSLAMKAVESLQRTTGLPKAASPALGGLIVGLLALLYPEVL YWGFENVDILLESRPFTSGLSTTILVQLIGVKILATSLCRASGLVGGYYAPSLFIGAATG MAYGKFMKFTFTGPEPLLHVPFLDVASPQAYGLVGMAATLAGVCKVPLTSVLLLFELTQD YRIVLPLLGAVGLSSWIASPQRFSKRIRSKLDSWEDKSSIPQQANDMLTENKEATSMDAA DLSLELYKIESSLCVYDANDSNMFKNLTVGEAMKTNYFSVSMTTPLIEALDLMLAEKQPF VMITENNTSARGLLALKNIQDFCKAAKTTRSQAEVKELLISHVCQAGKCKSWSVTPQMPL TTAEKIMDSHDVDHLPVVSEDANLQDRGLLIGFVDRECIAIARRAMATKEIFSSMYGIRK EER

Transcript Sequence

Transcript ID	Zm00001d043721_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:208292239:208298368:-1 gene:Zm00001d043721 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloride channel protein CLC-e
Sequence	GCCGGCGTGCCGTTTCTCTCCCCCCCTTCACCCTTTGCCTTCGTGAGCCAGTGGCTCAGC GCGCAATTCACGATTTACGAGATGAGGCTGAGATAGCCGGTGAACGATCAGAGCCCCCCA TGGCGGCATTCGCAGCCCCCTCCTTGTCCTCGCTCATCCTCCTCGCCTCGCCCCACTCCG CGCCCACTCTCCTCCGCCTGCGCCGCGCGGGCGGCCGCTCTCTGGAGCTGTCGTCACGGC GCGGCGGGAGCGCGCGCCTTCGGGTCGTTCGACGAGCGGTGACGGAGGAGGAGAGCGAGG CCGCGCGCGGAGACGAGGAGGTGGAGGAGGCCCCGGAGGAGCCAGTGGCTGGCCGCGACC TCGTCACGCTCGCCGCCTGCCTCGTGGGCCTCCTCACCGGCGTCTCCATCGTGCTCTTCA ACCTCTCGGTTCATGAAATACGTGACGTATTTTGGGACGGTATTCCTTTGCGAGGCGCTT CATGGCTGAGGGAAGAACCGATTGGTGAAGTCTGGCAGAGAGTGATATTTGTTCCGGTCA GTGGAGGTGTTATAGTGGGTGGATTGAACGCTCTAAGAAGTCAGATAGAAACTAACTCAG ATGCCCCTGTGTCCAAGATAAAGAGTGCATTTAGACCATTCTTGAAAGCTGTGGCAGCAT CTTTCACTCTTGGAACTGGCAATTCACTGGGTCCTGAGGGTCCCAGTGTGGAAATTGGTT CTGCAATAGCCAAAGGATTTGGTGATGTATTTGAGTGGGACGGTGGGAAAAGGCTGTCTC TTGTGGCAGCTGGGTCAGCAGCTGGGCTTTCATCTGGTTTTAATGCTGCTGTTGCTGGGT GTTTTTTTGCTGTGGAATCTGTTTTGTGGCCTTCTGCGGATTCCTCATCCCTTGCCAACT CGACACCTATGGTGATACTCAGTTCAGTGATAGCATCTGTTGTTTCAGAGATTGGTCTAG GTTCTGATCCCGCTTTCACTGTTCCGGAATATGATTTTCGCTCCCCAACAGAACTTCCTC TATACCTTTTGCTGGGTGTCTTCTGCGGGTTGGTGTCAATTGCATTATCAAGATGTACAT CACTTGCTATGAAGGCAGTTGAAAGTTTACAAAGGACAACAGGGTTACCGAAGGCTGCAT CTCCGGCTTTAGGTGGCCTCATTGTTGGTCTCCTTGCACTTTTGTACCCTGAAGTATTGT ACTGGGGCTTTGAAAATGTTGATATCTTGCTGGAATCACGGCCATTTACAAGCGGCCTCT CAACGACCATATTGGTTCAGCTTATTGGAGTGAAAATATTAGCAACATCTTTGTGCAGGG CTTCTGGATTGGTTGGTGGTTATTATGCACCATCTCTTTTTATTGGTGCAGCTACAGGGA TGGCATATGGCAAATTCATGAAGTTTACATTTACTGGCCCTGAACCATTGCTGCATGTCC CATTCTTAGATGTGGCATCACCTCAAGCATATGGCCTGGTAGGTATGGCAGCTACCCTCG CCGGTGTATGCAAGGTGCCTCTGACATCTGTCCTACTACTTTTTGAGCTTACACAAGACT ATCGTATAGTTCTACCTTTGCTCGGGGCTGTTGGGTTATCATCCTGGATTGCTTCTCCTC AAAGGTTCTCTAAAAGAATTAGGAGTAAGCTGGATTCTTGGGAGGATAAATCGAGTATTC CTCAGCAAGCAAACGACATGCTCACTGAAAACAAAGAGGCCACTTCCATGGATGCAGCTG ATTTGTCGTTAGAATTATATAAAATTGAAAGCTCCCTTTGTGTCTATGATGCCAACGACA GCAATATGTTCAAAAATCTTACTGTTGGTGAGGCCATGAAAACTAACTACTTCTCTGTCT CAATGACAACCCCATTAATTGAGGCACTAGATCTTATGCTTGCCGAGAAGCAGCCCTTTG TTATGATAACTGAGAATAACACATCTGCAAGAGGCTTGCTGGCACTAAAGAATATCCAAG ATTTTTGCAAAGCTGCAAAAACTACCAGATCACAAGCTGAGGTAAAGGAACTCCTGATAT CTCATGTTTGCCAAGCAGGCAAGTGTAAATCGTGGTCTGTGACGCCTCAGATGCCACTTA CTACTGCAGAGAAGATTATGGACTCTCATGATGTGGATCACCTACCTGTAGTTTCTGAGG ATGCTAATCTTCAGGACAGAGGACTTTTGATAGGTTTTGTAGACCGAGAATGCATTGCCA TTGCTCGAAGAGCCATGGCAACAAAAGAAATTTTCAGTTCTATGTATGGGATCAGGAAGG AAGAGAGGTAGCACGAAAGGAAGGAATGACACGACACAGAAGCACTCCCTACTTGGCAAA TCTGGCTTCTTTTCCTGGTCAAGGCTAATACCTCTCCAGGTTATTAGTTGCTAAGTAAAA ACGTGCTTCAGGCATGTGGTTAAGGTGG