Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043660_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:206187330:206189862:1 gene:Zm00001d043660 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN-formed protein8 description: PIN-formed protein8
Sequence

ATGATCTCTTGGCCAACCATCTACCATGTTCTTGAAGAAACGGTTCCCCTGTATGTAGCT
ATGATAGTGGCCTACCTATCCATACAATGGTGGAAGCTGTTCACGCCAGAGCAGTGCTCC
GGTATCAACAAGTTCGTGGCGAAGTTTTCCATCCCTTTGCTCTCTTTCCAGATCCTCTCT
ACAAACAATCCTTACAGCATGAACCTGAAGCTCATATTCTCAGATGTCCTACAGAAATCG
CTCTCCTTGCTGGGGTTTGCAGTTGCCTCTAGGGTGTGCTGCGAGGAGAAGTTTGATTGG
CTGATTACAGGTTTTTCTCTATCAACGCTGCCAAATACCTTGATTGTTGGAATCCCATTG
CTCAAAGGAATGTATGGCGATGAAGCTGTGAAGCTGCTAAGCCAGATAGTTGCCTTGCAA
AGCCTGATTTGGTACACACTTCTGTTGTTTCTGTTTGAGTTTCGGGCTGCTAGAGGAATG
GCTATCACAACATCATCTGAAGCTATAGATGAAGCAGAATCAGGTACTCCAGGACCTATG
CAGCAAGGACACGAAGAGGGGCAAGCGAAAGGAGTCTCGGCAAGATGTTATGGTGCCTTC
CACTTCTTACTGGTGGTCAGTAGGAAGCTGGTGACAAATCCCAACATGTATGCAAGCCTA
GCCGGCCTGATCTGGGCTCTGATCAGCTTCAGGTGGCGAATACAGTTACCATCGATCGTC
AACAACTCCATAAGAATACTTTCAGATGGAGGGCTAGGGATGGCGATGTTCAGCTTAGGT
GTCTTCACTGCCCTGCAAACGAAAATCGTGGCATGTGGAACCAAAAGGATGCTGCTATCA
CTAGGCATCAGGTTCTTCCTCGGGCCAGGCCTGATGGTGATCTCTTCCTATCTAATCGGT
ATGCGTGGAACTTTGCTGAAGGTGGCCATAATACAGGCAGCTCTACCTCAAGGAATAGTG
CCGTTTGTGTTTGCCAAAGAGTATAACGTGCATGCGGATATTCTGAGCACTGCGATAATT
CTGGGAATGATGGTTGCGGTTCCGGTGGCCCTGGGTTATTACTTCGTCATGGATCATCCC
AGACTCTAA

Peptide Sequence

PEP ID

Zm00001d043660_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:206187330:206189862:1 gene:Zm00001d043660 transcript:Zm00001d043660_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN-formed protein8 description: PIN-formed protein8
Sequence

MISWPTIYHVLEETVPLYVAMIVAYLSIQWWKLFTPEQCSGINKFVAKFSIPLLSFQILS
TNNPYSMNLKLIFSDVLQKSLSLLGFAVASRVCCEEKFDWLITGFSLSTLPNTLIVGIPL
LKGMYGDEAVKLLSQIVALQSLIWYTLLLFLFEFRAARGMAITTSSEAIDEAESGTPGPM
QQGHEEGQAKGVSARCYGAFHFLLVVSRKLVTNPNMYASLAGLIWALISFRWRIQLPSIV
NNSIRILSDGGLGMAMFSLGVFTALQTKIVACGTKRMLLSLGIRFFLGPGLMVISSYLIG
MRGTLLKVAIIQAALPQGIVPFVFAKEYNVHADILSTAIILGMMVAVPVALGYYFVMDHP
RL

Transcript Sequence

Transcript ID

Zm00001d043660_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:206187330:206189862:1 gene:Zm00001d043660 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN-formed protein8 description: PIN-formed protein8
Sequence

GGACATTTGGAGTATTCTTCAGTTCAGGTCCCTCCAATTCCCACCATGATCTCTTGGCCA
ACCATCTACCATGTTCTTGAAGAAACGGTTCCCCTGTATGTAGCTATGATAGTGGCCTAC
CTATCCATACAATGGTGGAAGCTGTTCACGCCAGAGCAGTGCTCCGGTATCAACAAGTTC
GTGGCGAAGTTTTCCATCCCTTTGCTCTCTTTCCAGATCCTCTCTACAAACAATCCTTAC
AGCATGAACCTGAAGCTCATATTCTCAGATGTCCTACAGAAATCGCTCTCCTTGCTGGGG
TTTGCAGTTGCCTCTAGGGTGTGCTGCGAGGAGAAGTTTGATTGGCTGATTACAGGTTTT
TCTCTATCAACGCTGCCAAATACCTTGATTGTTGGAATCCCATTGCTCAAAGGAATGTAT
GGCGATGAAGCTGTGAAGCTGCTAAGCCAGATAGTTGCCTTGCAAAGCCTGATTTGGTAC
ACACTTCTGTTGTTTCTGTTTGAGTTTCGGGCTGCTAGAGGAATGGCTATCACAACATCA
TCTGAAGCTATAGATGAAGCAGAATCAGGTACTCCAGGACCTATGCAGCAAGGACACGAA
GAGGGGCAAGCGAAAGGAGTCTCGGCAAGATGTTATGGTGCCTTCCACTTCTTACTGGTG
GTCAGTAGGAAGCTGGTGACAAATCCCAACATGTATGCAAGCCTAGCCGGCCTGATCTGG
GCTCTGATCAGCTTCAGGTGGCGAATACAGTTACCATCGATCGTCAACAACTCCATAAGA
ATACTTTCAGATGGAGGGCTAGGGATGGCGATGTTCAGCTTAGGTGTCTTCACTGCCCTG
CAAACGAAAATCGTGGCATGTGGAACCAAAAGGATGCTGCTATCACTAGGCATCAGGTTC
TTCCTCGGGCCAGGCCTGATGGTGATCTCTTCCTATCTAATCGGTATGCGTGGAACTTTG
CTGAAGGTGGCCATAATACAGGCAGCTCTACCTCAAGGAATAGTGCCGTTTGTGTTTGCC
AAAGAGTATAACGTGCATGCGGATATTCTGAGCACTGCGATAATTCTGGGAATGATGGTT
GCGGTTCCGGTGGCCCTGGGTTATTACTTCGTCATGGATCATCCCAGACTCTAACCATGT
CCCATTTGCGGAAAGGATTATCCTCTAGATTCATATTGCGGGCGTGCTTGTGATATTATA
TCTTTGTGGAGGCTGTATATATCTGGATTCGTGTTAGTTGACCCAAGCTAATGATAACAA
CCAGCTTGGTTTCGGTGAATTGTTCGGCCAGTACTTGATTAGTAAATAATTGATGCAAAA
GAAGGAAGAA