Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043625_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:205468692:205471845:-1 gene:Zm00001d043625 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plasminogen activator inhibitor 1 RNA-binding protein

Sequence

ATGGCCACCCTCAACCCTTTCGAACTCCTCGGCGCCGACGACAACGACGACCCGTCGCTG
TTGATTGCGGCGGCGGCGGCTGCTGCTCAGAAAGCCGAGGCGAAGAAGTCCGCCGTGGCG
CCTGCTGGGAAGGCTGCCCAGCCTGCGGCGACCACCAAGTTCCCGACCAAGCCCGCTCCT
CCCTCGCAGACGGTTCGGGATGCACGCGGCGGTGGCTCATCAGCTCGTGGAGGCTTTGGC
CGTGGTGAACGTGGCCGTGGCAGAGGTGGACGGGGATATGGTCAGAACCGTGGCTTCAGT
GGTGACAATGGCAATGAGTTCCAGGGAGGTTATGGTGGCGGAGGCTATGGGGATGGTGCT
GTAACTGGTGGATCTGAAGGAGAAAGGGAGAGAGACACTCGTCCCCCGTACCGTGGCGGA
GGCAGACGTGGTGGTTACAGGAATGTTGAGTTTGGTGATGACTCTGAGAGGCCACCACGG
AGAAACTATGAGCGCCACAGCGGGACTGGCCATGGCTATGAGATGAAGCGTGATGGCGCA
GGGCGTGGGAACTGGGGCACTGCCACTGATGAGCTTATTGCCCAGGATGCAGAGGACTCT
CCGAAGATGGAGGAGGCTGCTCCTGTTGCTGAGAAACAAGGTGAGCAGATCGATGCCCCA
GCAGCAGATGAGAACAAAGATAACAAGGATGCTACTGCAAATGAGGAGGAAGAAAAGGAA
GAGGACAAGGAGATGACTCTGGAGGAATTTGAGAAAATAAGAGAGGAGAAGAGGAAAGCA
CTACTTGCGTTGAAGGCTGAGGAGAGGAAAGTTGAAGTTGACAAGGATCTGCGTTCTCTG
CAGCCACTTTCAAACAAGAAAGAAAATGATGAAGTTTTCATTAAGCTGGGTTCTGACAAG
GATAAGAAGAAGGAAAATGCTGAGCGTGATGAGCGTGCCAAGAAGTCGGTGAGCATCAAC
GAGTTCCTGAAACCTGCTGAAGGAGAAAGGTACTACGGCGGCCGTGGCCGTGGAAGGGGC
CGTGGGGATCGTGGTGGTTTTAGAGGCGGATACGGAGGGGGATACAGTCGTGGCCCAGCT
GCTGCTGCTCCATCCATTGAAGATCAAGCTCAGTTCCCAAGCCTTGGTGGGAAGTGA

Peptide Sequence

PEP ID

Zm00001d043625_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:205468692:205471845:-1 gene:Zm00001d043625 transcript:Zm00001d043625_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plasminogen activator inhibitor 1 RNA-binding protein

Sequence

MATLNPFELLGADDNDDPSLLIAAAAAAAQKAEAKKSAVAPAGKAAQPAATTKFPTKPAP
PSQTVRDARGGGSSARGGFGRGERGRGRGGRGYGQNRGFSGDNGNEFQGGYGGGGYGDGA
VTGGSEGERERDTRPPYRGGGRRGGYRNVEFGDDSERPPRRNYERHSGTGHGYEMKRDGA
GRGNWGTATDELIAQDAEDSPKMEEAAPVAEKQGEQIDAPAADENKDNKDATANEEEEKE
EDKEMTLEEFEKIREEKRKALLALKAEERKVEVDKDLRSLQPLSNKKENDEVFIKLGSDK
DKKKENAERDERAKKSVSINEFLKPAEGERYYGGRGRGRGRGDRGGFRGGYGGGYSRGPA
AAAPSIEDQAQFPSLGGK

Transcript Sequence

Transcript ID

Zm00001d043625_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:205468692:205471845:-1 gene:Zm00001d043625 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plasminogen activator inhibitor 1 RNA-binding protein

Sequence

GCCTCTCAAGCTCAAGGGCTCAAGGCCATTAGCGTAATTGCAAAATTGTAATTAATTCTC
AATCTCAAGGTTAGTAACGTAATTCTAGAGCTTCTGAGCAGAAAAGGTACGGAGTCGGAA
GGATATGATCGCTTAGGAGTGCGGCTAGGGTTTTTTCCTGTCACACCTTCCCTCGGTCCC
TTCCATCTCCTAGCCGCCGCCGCCGCCGCCCAAAACCCTACCTACCCTCTTCTCCCCCTC
ACTCTCCTTTCATCTCCATTCTAATGGCGGCCCAACCCGTCCGGCGAAGCTGCTAGTGCT
TGTATCTACTATCTTCATCAGGTACTTCGCGATCCTACTGAAGTATTCCCCGCCGCCGCT
GCCATGGCCACCCTCAACCCTTTCGAACTCCTCGGCGCCGACGACAACGACGACCCGTCG
CTGTTGATTGCGGCGGCGGCGGCTGCTGCTCAGAAAGCCGAGGCGAAGAAGTCCGCCGTG
GCGCCTGCTGGGAAGGCTGCCCAGCCTGCGGCGACCACCAAGTTCCCGACCAAGCCCGCT
CCTCCCTCGCAGACGGTTCGGGATGCACGCGGCGGTGGCTCATCAGCTCGTGGAGGCTTT
GGCCGTGGTGAACGTGGCCGTGGCAGAGGTGGACGGGGATATGGTCAGAACCGTGGCTTC
AGTGGTGACAATGGCAATGAGTTCCAGGGAGGTTATGGTGGCGGAGGCTATGGGGATGGT
GCTGTAACTGGTGGATCTGAAGGAGAAAGGGAGAGAGACACTCGTCCCCCGTACCGTGGC
GGAGGCAGACGTGGTGGTTACAGGAATGTTGAGTTTGGTGATGACTCTGAGAGGCCACCA
CGGAGAAACTATGAGCGCCACAGCGGGACTGGCCATGGCTATGAGATGAAGCGTGATGGC
GCAGGGCGTGGGAACTGGGGCACTGCCACTGATGAGCTTATTGCCCAGGATGCAGAGGAC
TCTCCGAAGATGGAGGAGGCTGCTCCTGTTGCTGAGAAACAAGGTGAGCAGATCGATGCC
CCAGCAGCAGATGAGAACAAAGATAACAAGGATGCTACTGCAAATGAGGAGGAAGAAAAG
GAAGAGGACAAGGAGATGACTCTGGAGGAATTTGAGAAAATAAGAGAGGAGAAGAGGAAA
GCACTACTTGCGTTGAAGGCTGAGGAGAGGAAAGTTGAAGTTGACAAGGATCTGCGTTCT
CTGCAGCCACTTTCAAACAAGAAAGAAAATGATGAAGTTTTCATTAAGCTGGGTTCTGAC
AAGGATAAGAAGAAGGAAAATGCTGAGCGTGATGAGCGTGCCAAGAAGTCGGTGAGCATC
AACGAGTTCCTGAAACCTGCTGAAGGAGAAAGGTACTACGGCGGCCGTGGCCGTGGAAGG
GGCCGTGGGGATCGTGGTGGTTTTAGAGGCGGATACGGAGGGGGATACAGTCGTGGCCCA
GCTGCTGCTGCTCCATCCATTGAAGATCAAGCTCAGTTCCCAAGCCTTGGTGGGAAGTGA
AGGGCGCCCAGCTGCTGCTGTCACCGAGCGTTGTGTTGTCTGCTGTTGTCATATTTAAAT
TTTGTCCGACGTTACATTTCTGTGCCACGGTTTAAACGGAACAAATAATGGTGTTGCATG
TGGCTATCTTTGGTTATGTGGTACTTGACGTTGAATACCGGAGTTGTTTATCAGAATTAG
ACTCCAAATTTTGTAGGCCAGCTTTTACCATTTTGTTGTCTTAGCATGCTGCCTTGTAAC
CCTCTCGCAGCCCTCGTCCATGCTGTGAGTCACAGT