Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043621_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:205387381:205388211:-1 gene:Zm00001d043621 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatase phospho1

Sequence

ATGGCCGGGGTCGTTGTGGTGTTCGACTTCGACAAGACGATCATCGACGTCGACAGCGAC
AACTGGGTCGTGGACAGCCTCGGCTTCACCGAGCCGTTCGAGCGCCTCCTGCCCACCATG
CCCTGGAACACGCTCATGGACACCATGATGGGGGAGCTGCACGCGCACGGCAGGACCCTG
GACGACGTCGCCGAGGCGCTCCGTGCGGCGCCCGTCGTCGCGGGCGTCCCCGCCGCCATC
AAGGCCGCCTACGCGCTCGGCTGCGACCTGCGCGTCCTCAGCGACGCCAACGCCTTCTTC
ATCGACACCGTCCTGGCGCACCACGGCCTGCTGGGCTGCTTCTCCCAGATCAACACCAAC
CCCAGCCACCCCGACGCCGACGCCGACGGCCGCCTCCGCATCGGGCCCTACCACGACCTG
CACGGGTGCGGCGTCGGCACCTGCCCGCCCAACATGTGCAAGGGCCAGGTGCTGGACCGC
ATCCTCCGCGAGGCGTCGTCGTCGGCCGCCGGCAGGAAGCGCGTCGTGTACCTGGGCGAC
GGCCGCGGCGACTACTGCCCGGCGCTGCGGCTGGCAAGGGAGGACTTCGTCATGCCGCGC
AGGGGCTTCCCCGTGTGGGACCTCATCTGCGAGGACCCCGCGCGGCTGCAGGCGGAGGTG
CACCCCTGGGCCGACGGCGCCGAGCTGGAGGAGACGCTGCTGCGCCTCGTCGGGAGGGCG
CGCGTGGAGGAGGCCGCACTGCTGCCGCCGCTCGACTGCAAGCTCGAGTCCATGCCCGTT
GCCGCGCAGGAGGGCATGGGACCCATCATGCCGCTCGGCGTCAAGCACTGA

Peptide Sequence

PEP ID

Zm00001d043621_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:205387381:205388211:-1 gene:Zm00001d043621 transcript:Zm00001d043621_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatase phospho1

Sequence

MAGVVVVFDFDKTIIDVDSDNWVVDSLGFTEPFERLLPTMPWNTLMDTMMGELHAHGRTL
DDVAEALRAAPVVAGVPAAIKAAYALGCDLRVLSDANAFFIDTVLAHHGLLGCFSQINTN
PSHPDADADGRLRIGPYHDLHGCGVGTCPPNMCKGQVLDRILREASSSAAGRKRVVYLGD
GRGDYCPALRLAREDFVMPRRGFPVWDLICEDPARLQAEVHPWADGAELEETLLRLVGRA
RVEEAALLPPLDCKLESMPVAAQEGMGPIMPLGVKH

Transcript Sequence

Transcript ID

Zm00001d043621_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:205387381:205388211:-1 gene:Zm00001d043621 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatase phospho1

Sequence

ATGGCCGGGGTCGTTGTGGTGTTCGACTTCGACAAGACGATCATCGACGTCGACAGCGAC
AACTGGGTCGTGGACAGCCTCGGCTTCACCGAGCCGTTCGAGCGCCTCCTGCCCACCATG
CCCTGGAACACGCTCATGGACACCATGATGGGGGAGCTGCACGCGCACGGCAGGACCCTG
GACGACGTCGCCGAGGCGCTCCGTGCGGCGCCCGTCGTCGCGGGCGTCCCCGCCGCCATC
AAGGCCGCCTACGCGCTCGGCTGCGACCTGCGCGTCCTCAGCGACGCCAACGCCTTCTTC
ATCGACACCGTCCTGGCGCACCACGGCCTGCTGGGCTGCTTCTCCCAGATCAACACCAAC
CCCAGCCACCCCGACGCCGACGCCGACGGCCGCCTCCGCATCGGGCCCTACCACGACCTG
CACGGGTGCGGCGTCGGCACCTGCCCGCCCAACATGTGCAAGGGCCAGGTGCTGGACCGC
ATCCTCCGCGAGGCGTCGTCGTCGGCCGCCGGCAGGAAGCGCGTCGTGTACCTGGGCGAC
GGCCGCGGCGACTACTGCCCGGCGCTGCGGCTGGCAAGGGAGGACTTCGTCATGCCGCGC
AGGGGCTTCCCCGTGTGGGACCTCATCTGCGAGGACCCCGCGCGGCTGCAGGCGGAGGTG
CACCCCTGGGCCGACGGCGCCGAGCTGGAGGAGACGCTGCTGCGCCTCGTCGGGAGGGCG
CGCGTGGAGGAGGCCGCACTGCTGCCGCCGCTCGACTGCAAGCTCGAGTCCATGCCCGTT
GCCGCGCAGGAGGGCATGGGACCCATCATGCCGCTCGGCGTCAAGCACTGA