Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043609_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:3:205101768:205107222:1 gene:Zm00001d043609 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MEK homolog1 description: MEK homolog1
Sequence

ATGAAGGGGAAGAAGCCGGTCAAGGAGCTCAAGCTCACCGTGCCGGCGCAGGAGACCCCG
GTAGACAAGTTCCTGACGGCAAGTGGCACGTTCAAGGATGGTGAGCTGAGGCTCAATCAG
AGCGGCTTGCGGCTTATCTCTGAGGAAAACGGGGATGAAGATGAATCTACAAAGCTGAAG
GTGGAAGATGTGCAGTTATCAATGGATGATCTTGAGATGATTCAAGTCATTGGCAAAGGA
AGCGGTGGTGTTGTCCAGCTAGTGAGGCACAAATGGGTGGGCACATTATTTGCCTTAAAG
GGTATTCAAATGAACATTCAGGAGTCAGTTCGTAAACAAATAGTACAGGAGCTCAAAATA
AACCAAGCAACACAGAGCCCTCATATAGTTATGTGCCATCAATCTTTTTACCACAATGGT
GTAATATATCTTGTTCTTGAGTACATGGACCGTGGATCGCTTGCAGACATTGTTAAGCAA
GTGAAGACTATTCTGGAGCCATACCTTGCAGTACTTTGTAAGCAGGTCTTGGAGGGTTTA
TTGTATCTTCATCATCAAAGGCACGTGATTCACAGGGACATAAAACCATCTAACTTGTTG
GTCAACCGTAAAGGTGAAGTCAAGATTACCGACTTCGGAGTGAGTGCTGTGCTAGCAAGC
TCAATAGGTCAGCGAGATACATTTGTTGGAACCTACAACTATATGGCGCCTGAGCGGATT
AGTGGTAGCACTTATGACTACAAAAGTGACATATGGAGTTTGGGCTTAGTTATACTTGAG
TGTGCCATTGGCCGGTTCCCTTATATACCTTCGGAAGGTGAAGGTTGGTTAAGCTTTTAT
GAACTTCTGGAGGCCATTGTCGATCAGCCACCACCTTCTGCACCTGCAGATCAGTTCTCT
CCAGAATTCTGCTCATTTATCTCCTCTTGA

Peptide Sequence

PEP ID

Zm00001d043609_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:3:205101768:205107222:1 gene:Zm00001d043609 transcript:Zm00001d043609_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MEK homolog1 description: MEK homolog1
Sequence

MKGKKPVKELKLTVPAQETPVDKFLTASGTFKDGELRLNQSGLRLISEENGDEDESTKLK
VEDVQLSMDDLEMIQVIGKGSGGVVQLVRHKWVGTLFALKGIQMNIQESVRKQIVQELKI
NQATQSPHIVMCHQSFYHNGVIYLVLEYMDRGSLADIVKQVKTILEPYLAVLCKQVLEGL
LYLHHQRHVIHRDIKPSNLLVNRKGEVKITDFGVSAVLASSIGQRDTFVGTYNYMAPERI
SGSTYDYKSDIWSLGLVILECAIGRFPYIPSEGEGWLSFYELLEAIVDQPPPSAPADQFS
PEFCSFISS

Transcript Sequence

Transcript ID

Zm00001d043609_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:205101768:205107222:1 gene:Zm00001d043609 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MEK homolog1 description: MEK homolog1
Sequence

ACACACACTCGCTTTCTTCGGTTCTTCCTCCTCGAGCAGCCACTTCCGTCTCTAACCCTA
CAGCGACGACGAGAGCGAGGCCATGAAGGGGAAGAAGCCGGTCAAGGAGCTCAAGCTCAC
CGTGCCGGCGCAGGAGACCCCGGTAGACAAGTTCCTGACGGCAAGTGGCACGTTCAAGGA
TGGTGAGCTGAGGCTCAATCAGAGCGGCTTGCGGCTTATCTCTGAGGAAAACGGGGATGA
AGATGAATCTACAAAGCTGAAGGTGGAAGATGTGCAGTTATCAATGGATGATCTTGAGAT
GATTCAAGTCATTGGCAAAGGAAGCGGTGGTGTTGTCCAGCTAGTGAGGCACAAATGGGT
GGGCACATTATTTGCCTTAAAGGGTATTCAAATGAACATTCAGGAGTCAGTTCGTAAACA
AATAGTACAGGAGCTCAAAATAAACCAAGCAACACAGAGCCCTCATATAGTTATGTGCCA
TCAATCTTTTTACCACAATGGTGTAATATATCTTGTTCTTGAGTACATGGACCGTGGATC
GCTTGCAGACATTGTTAAGCAAGTGAAGACTATTCTGGAGCCATACCTTGCAGTACTTTG
TAAGCAGGTCTTGGAGGGTTTATTGTATCTTCATCATCAAAGGCACGTGATTCACAGGGA
CATAAAACCATCTAACTTGTTGGTCAACCGTAAAGGTGAAGTCAAGATTACCGACTTCGG
AGTGAGTGCTGTGCTAGCAAGCTCAATAGGTCAGCGAGATACATTTGTTGGAACCTACAA
CTATATGGCGCCTGAGCGGATTAGTGGTAGCACTTATGACTACAAAAGTGACATATGGAG
TTTGGGCTTAGTTATACTTGAGTGTGCCATTGGCCGGTTCCCTTATATACCTTCGGAAGG
TGAAGGTTGGTTAAGCTTTTATGAACTTCTGGAGGCCATTGTCGATCAGCCACCACCTTC
TGCACCTGCAGATCAGTTCTCTCCAGAATTCTGCTCATTTATCTCCTCTTGAATCACCCT
TTTTTGAAGAAGTTCGAGGATAAGGACTTAAACCTGGGGATTCTTGTGGAGAACCTGGAA
CCTCCAATGAATATACCCGAATAGCCTGTCGTTTTTAGTGATGAAGCCTTTGTTGTGCCT
TCAGGGTTTGGCCTCGAAGCCTCTTGGCATCTGCTCCTCAACTGCAGCCTCCCTACCTGA
ATATGCTATAACATCATTGTATGATTCAAGCCCCTTATCTGAGCATAAGAGTAGAGGGAA
CTATGCTGCATTCCGTGTATGGTCACCTTATTGTAGCTATTGTTGCGACGGGCCTTGTGA
TTTTGAGTCTTGTTTTAACTTTTGCAGTCTTATCGGCTGTGGATTCAAAATGAACGAACT
GAATATTC