Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043595_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:3:204592845:204595734:-1 gene:Zm00001d043595 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation (RCC1) family protein
Sequence

ATGATGTCGCTTGCCATAGACAGTTTGGGGAGCCTTTGGATGTGGGGGAGTTGCCCACAG
CAGACTGATGCCGGAGAGTTTTGTATTTCAAGTAGCTCTATCCCACTACCTGTGTGGGAT
TTCCATGGACACACCGTTGTTAAGGTTGCCTGTGGTAACGAGCATGTAGTAGCTGCAGTT
AGTGCTGGGGAGACCTATACTGGAGGTGACCTTGTTTGTTACGCTTGGGGAAATAACAAC
CATGGTCAGTTGGGTCTAGGTGACAAGGAAAGTAGATCTCGTCCTGTGCTTATTTCAGCA
TTTAGTGAAGGATCTTCCTGGGAGGTGTATGAAATTGCATGCGGAGCTTCCCATACTGCA
GTCCTCGCCAATAAGAAGTCCACTGACCAGATAGAATCTCGGTGCTGGACATTTGGCCTT
GGTGACAAGGGGCAGCTTGGCCATGGAACCACAGCCACCATTTGCTCACCACAACCTGTC
GATGGATTACCAACCGGATCCTTCCTTATTTCTCTTGACTGTGGATTGTTCCACACAACC
GTAGTCTCCTCTGATGGAGAGGTGTGGTGCTGGGGAATGGAGAGAGGTCTTGGATTGTGC
CCAGATGCTAGCTTTTCGGGAGTTGATGAAGGGGATGCTTTATATCCAATAAGAGTTCAG
TCTCCTGAGACCAATGGGTTCAAGTTTCTTGGTCCAGTGCAGATCGCCTGTGGAGCTGCC
CACACTGTTCTTGTTGCTGGTGATGGGTATAGGATGTGGGCATGGGGCAGAGGCCGCAGT
GGTGTGCTTGGGAGAGGCCAGACTGCTGACAGTTACATACCATGCGTTGTGATGTGGCCT
CCTCTTGATGAGAACTTTCATGAGGACCAAATGGGAGGATCAACATCAAGAGTGAATGAT
CACACTAGCACTGAGTTGGAACAGAAGCTATCTGCTGCCTCGGAGGAGTTACAATTCCTT
AGGTCAAAACTGACACTCATGGAGAGATATGCCAATATACTTCACATCTCAATCTTCCGT
AAGCCACTTGATGAACGGGCGCTACCACGTTCACTTCAGGAATCTTCCGTCTTTGATATC
AGAAAGGAATTTGAGAACATTTTGGATGCAGCAGATACTGATGAACTTAATCGTTTAGAG
ATCTTCTACCGCAGCATGCTTTCTGGCGTTAAAGACAAGCTTCTGAAGAGAAGAGTACGA
GAAATGGTCCAACAATGCATTATTTCACTCAGCAGGGAGGCCAAACCCTAA

Peptide Sequence

PEP ID

Zm00001d043595_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:3:204592845:204595734:-1 gene:Zm00001d043595 transcript:Zm00001d043595_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation (RCC1) family protein
Sequence

MMSLAIDSLGSLWMWGSCPQQTDAGEFCISSSSIPLPVWDFHGHTVVKVACGNEHVVAAV
SAGETYTGGDLVCYAWGNNNHGQLGLGDKESRSRPVLISAFSEGSSWEVYEIACGASHTA
VLANKKSTDQIESRCWTFGLGDKGQLGHGTTATICSPQPVDGLPTGSFLISLDCGLFHTT
VVSSDGEVWCWGMERGLGLCPDASFSGVDEGDALYPIRVQSPETNGFKFLGPVQIACGAA
HTVLVAGDGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDENFHEDQMGGSTSRVND
HTSTELEQKLSAASEELQFLRSKLTLMERYANILHISIFRKPLDERALPRSLQESSVFDI
RKEFENILDAADTDELNRLEIFYRSMLSGVKDKLLKRRVREMVQQCIISLSREAKP

Transcript Sequence

Transcript ID

Zm00001d043595_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:204592845:204595734:-1 gene:Zm00001d043595 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation (RCC1) family protein
Sequence

AATGCGGCGCCTCCACTTTGCGATGCCCGCGTCCTCGCTCCCCTCCCCATCCTCCTCATC
TACCGTGCTCTCCATTCCCCACCCGCTCCCACCGCCGCTCGCAGATGCCGCCCAAGGTGG
TCGCCGTCGCCGCGGGCGAGGCCCACACACTCGCCCTCACGGGTGACGGGCAGGTGTACT
CCTGGGGCAGGGGGCCGTTCGGTCGCCTCGGGAACGGCCGCGAGGACGACAAGCTGGTCC
CCACCGCGGTGGCGCCCGCGGTCTCTGCCAGCGGGACACCGCGGCCCAGGTTCGTCGCCG
TCGCGGCTGGTGCCTACCACAGCCTTGCGCTGGACGATGAAGGTTCACTCTGGTCATGGG
GTTACAATCTCTGTATCCTTTACACCTCTTGACTTAATTTCTAACTTTCTGATATTCCTG
TCATTATTGAGTACGTCACTTCCTTAACTATTTCACGGATGGTCAACTTGGCTATGGGGA
CCAGAATTCCCTTTTTCCATGTTTCGTTGAGCAATTTCAGGATTTAGGTTCTCCTGAAAC
ACTGAATGATGAAGACCAGAACACACGTGGTCGCACTTGTTTGAAGCTGTCTTCTGTCAC
AGCTGGTGGCATGATGTCGCTTGCCATAGACAGTTTGGGGAGCCTTTGGATGTGGGGGAG
TTGCCCACAGCAGACTGATGCCGGAGAGTTTTGTATTTCAAGTAGCTCTATCCCACTACC
TGTGTGGGATTTCCATGGACACACCGTTGTTAAGGTTGCCTGTGGTAACGAGCATGTAGT
AGCTGCAGTTAGTGCTGGGGAGACCTATACTGGAGGTGACCTTGTTTGTTACGCTTGGGG
AAATAACAACCATGGTCAGTTGGGTCTAGGTGACAAGGAAAGTAGATCTCGTCCTGTGCT
TATTTCAGCATTTAGTGAAGGATCTTCCTGGGAGGTGTATGAAATTGCATGCGGAGCTTC
CCATACTGCAGTCCTCGCCAATAAGAAGTCCACTGACCAGATAGAATCTCGGTGCTGGAC
ATTTGGCCTTGGTGACAAGGGGCAGCTTGGCCATGGAACCACAGCCACCATTTGCTCACC
ACAACCTGTCGATGGATTACCAACCGGATCCTTCCTTATTTCTCTTGACTGTGGATTGTT
CCACACAACCGTAGTCTCCTCTGATGGAGAGGTGTGGTGCTGGGGAATGGAGAGAGGTCT
TGGATTGTGCCCAGATGCTAGCTTTTCGGGAGTTGATGAAGGGGATGCTTTATATCCAAT
AAGAGTTCAGTCTCCTGAGACCAATGGGTTCAAGTTTCTTGGTCCAGTGCAGATCGCCTG
TGGAGCTGCCCACACTGTTCTTGTTGCTGGTGATGGGTATAGGATGTGGGCATGGGGCAG
AGGCCGCAGTGGTGTGCTTGGGAGAGGCCAGACTGCTGACAGTTACATACCATGCGTTGT
GATGTGGCCTCCTCTTGATGAGAACTTTCATGAGGACCAAATGGGAGGATCAACATCAAG
AGTGAATGATCACACTAGCACTGAGTTGGAACAGAAGCTATCTGCTGCCTCGGAGGAGTT
ACAATTCCTTAGGTCAAAACTGACACTCATGGAGAGATATGCCAATATACTTCACATCTC
AATCTTCCGTAAGCCACTTGATGAACGGGCGCTACCACGTTCACTTCAGGAATCTTCCGT
CTTTGATATCAGAAAGGAATTTGAGAACATTTTGGATGCAGCAGATACTGATGAACTTAA
TCGTTTAGAGATCTTCTACCGCAGCATGCTTTCTGGCGTTAAAGACAAGCTTCTGAAGAG
AAGAGTACGAGAAATGGTCCAACAATGCATTATTTCACTCAGCAGGGAGGCCAAACCCTA
AAGATAAGTGAATTGGATTATTACACTTGTTACCGGACTGCAAGTGGGTACAGTATCACC
TTTGGTCTCACTAAAATTGCAAAAAAAAAAGGTCAACCCAGTGTCTTATCTGTTTCTTCA
AACATAGTGAGTAGATCTGTCCTGGCATCAAGATCATCACCTGGCCGACCATTGCACGAA
GACAGCATTACTCATACTGACATGTAAGCATATATGTTGTTTATGAAATTCTTTATATGA
TAAATGCATCCTAGATAAATTGAATCCTGTGTAAAGGATGTTTCTGTGGATTGTCATAGA
CGGACAAGAATTTATGGACATATGGTTAAAGTGTTAT