Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043590_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:204497738:204498996:1 gene:Zm00001d043590 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pistil-specific extensin-like protein

Sequence

ATGGCCTCCGCTTCACTGAGCAGTCAGGCCTCTCTGGCCGTAGCAGCGCTCGTCGCTGCG
GCGCTGCTGGTCGCCGCCAGCCACGCGACGCCCGCCGACGACAAGGCCAGGGCGCCAACG
TCGGCCATAACTAACAAGCCTGCCGAGCATTCAGCCTACGGCAGCGCGATGCCGCGAGGG
TCGCCGTCGCCAGCATCGCCAGCACCCGTGAACAAGGGTGTGCCGTCACCCGGCGGCACT
GCTGCGCCGCCTCCGGGCTACAACAGCAACAATGCCACGCCGCCGTCGCTGCCCCTCGTT
CCGCCGCCGCGGCCGCTTCCATTCGTCATCGTAGAGGGCGTCATATACTGCAAGAGCTGC
AAGGGGAAGGGCTACAACACCGGCATAGACGCGTCGCCACTGCAAGGGGCCACGGCGATG
ATGGTGTGCTACGGGCGGAAGGTGGTGAACGCGACGGGGACGGTGACCGACGCCAACGGC
TACTTCCTCATCATGTTCTACGACATGGCCAGCTTCAGCTCCAAGACCTGCAAGATGTAC
CTGGTCTCGTCGCCGACGCCGCAGTGCAGCAAGCCCTTCTACCCGCCCAACCAGTGGATC
GGGCTCTCCCTGGTCAGGGAGACCAGGACGGTCCCGCCGGCGGGGCTGCAGGGCATCTAC
ACCCCCACCAGCGTCCTCTTCTACGCCCCCGCCGCCAAAGGCCAGTGCCCCTACTGA

Peptide Sequence

PEP ID

Zm00001d043590_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:204497738:204498996:1 gene:Zm00001d043590 transcript:Zm00001d043590_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pistil-specific extensin-like protein

Sequence

MASASLSSQASLAVAALVAAALLVAASHATPADDKARAPTSAITNKPAEHSAYGSAMPRG
SPSPASPAPVNKGVPSPGGTAAPPPGYNSNNATPPSLPLVPPPRPLPFVIVEGVIYCKSC
KGKGYNTGIDASPLQGATAMMVCYGRKVVNATGTVTDANGYFLIMFYDMASFSSKTCKMY
LVSSPTPQCSKPFYPPNQWIGLSLVRETRTVPPAGLQGIYTPTSVLFYAPAAKGQCPY

Transcript Sequence

Transcript ID

Zm00001d043590_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:204497738:204498996:1 gene:Zm00001d043590 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pistil-specific extensin-like protein

Sequence

GTCACCACTCACCACCCACTGCATTATTCCAAATCCAGATCTTCTGTTAAGAGCTACTGG
TAATCGTTAGTCAAAGAGCGTGCCAAGCCAAGAACCAGGATATGGCCTCCGCTTCACTGA
GCAGTCAGGCCTCTCTGGCCGTAGCAGCGCTCGTCGCTGCGGCGCTGCTGGTCGCCGCCA
GCCACGCGACGCCCGCCGACGACAAGGCCAGGGCGCCAACGTCGGCCATAACTAACAAGC
CTGCCGAGCATTCAGCCTACGGCAGCGCGATGCCGCGAGGGTCGCCGTCGCCAGCATCGC
CAGCACCCGTGAACAAGGGTGTGCCGTCACCCGGCGGCACTGCTGCGCCGCCTCCGGGCT
ACAACAGCAACAATGCCACGCCGCCGTCGCTGCCCCTCGTTCCGCCGCCGCGGCCGCTTC
CATTCGTCATCGTAGAGGGCGTCATATACTGCAAGAGCTGCAAGGGGAAGGGCTACAACA
CCGGCATAGACGCGTCGCCACTGCAAGGGGCCACGGCGATGATGGTGTGCTACGGGCGGA
AGGTGGTGAACGCGACGGGGACGGTGACCGACGCCAACGGCTACTTCCTCATCATGTTCT
ACGACATGGCCAGCTTCAGCTCCAAGACCTGCAAGATGTACCTGGTCTCGTCGCCGACGC
CGCAGTGCAGCAAGCCCTTCTACCCGCCCAACCAGTGGATCGGGCTCTCCCTGGTCAGGG
AGACCAGGACGGTCCCGCCGGCGGGGCTGCAGGGCATCTACACCCCCACCAGCGTCCTCT
TCTACGCCCCCGCCGCCAAAGGCCAGTGCCCCTACTGATCACGACATGACACGACACGGC
CTCTTCCGACACCGTTGGACGCAGGCGAGGAGATAGACCACTGTACGTGGTCGGCGCATG
GGGCGTACGTGGCCGCCGACGTGCATGCATATGTTCAATTCGACGCCGCCGGCGCCGTCG
AACGCGCGAGACTGCGTGCGTCTTTTGGATGCATCTCGGTCGATCCAGGCAGTAAGTAAT
AAGCTAGCTAGGCATTGCTGAATTACATTCCGGTGGAAGTTCCGTCTGCAGTGACGACTG
ATTACGATGTCGGTGATATTGACTTCTTTATTTATTATTTTAAAAGTTGTCATTTGTTCT
TC