Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043519_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:3:202650470:202657105:1 gene:Zm00001d043519 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M28 family protein
Sequence

ATGTCCCACCTCGACGCGGCCTCGCTCCTCGCCCCCTCGCCGCCGCTGGCAAAGCCCCAC
CCGCGCAGCCGCTTCCTCTGCCTCATCTCCTCCATGCTCGCCGTCCTCGGCGCCTCCCTC
GCGGGTCTCCTCTTATTCGCGCTCCACCCCGCGCCGAACCCGGTCCCGAACTACGCGTCG
CTCTTCCTCTCCCTCGGATCCAACGACACCGCCGCCTCGCACCTCCGAGCGCTCACTCTC
CACCCGCACGTCGCGGGGACCAAGGCGAACGCCCTCACCGCCCGCTACGTGTTCGACGCG
CTCTCCGCGCTCTCCTTCCCCACCCACATCACGCCTTACTCCGTCCTCCTCTCCTACCCC
GTCCACCGCTCCCTCTCCCTCTCGGCGCCAGGCCGCGGCGTCGTCACCTCCTTCTCCCTA
AAGCAGGAGACCTACCCCAACGACCCCTACGCAGCAGCCGCGGCGGAGACCATCCCGACG
TTCTACGCGTACTCGGCCTCCGGGTCGGTCTCCGCGGAGGCCGTGTATGCTAACTACGGC
CGCGAGGAGGACTTCTCTTACCTCGCCTCCCGCGGCGTGGACGTCGCGGGCAAGGTCGCG
TTCGCGCGGTACGGGAGGATCCACTGCGAGGACATAGCGCACAACGCGCGCGCCGCCGGC
GCCGCGGCCGCGGTGGTGTACACTGACCCGCTGCAGTACGGCGGCGCACCCGGTGAGGGG
TGGTTCCCCGACTCGCGGTGGCTGCCGCCCAGCGGTGTGCAGGTGGGGAGCCTCTTCCGG
GGCGTGGGGGACCCGACGACGCCGATGTGGGCATCGTCCGAGGGCTGCGAGCGCGTCAGC
TTGGAGGAGGCCATGAATACCGATGACATGCCGCTCATCCCAGCCCTGCCGGTATCGGCT
CAGGACGCGATGGAGATACACAGAGCCATGGGCGGGGCCGTGGCGCCGGAGGACTGGCAG
GGCCGTGAAGACGGACCCGTTTACCGCCTCGGGCCAGGGCCGGCAGTTTTGAACCTGACA
TATCTTGGGAATGATTCGATGGCAACGATTGAGAATGTCTTCGCCATTATCGAGGGCGCC
GAAGAGCCCGATAGATATGTCATTCTTGGTAACCATCGTGATGCTTGGACGTTCGGTGCA
TCTGATCCCAACAGTGGAACAGCAGCTATGATTGAGTTAGCTAAAAGGTTTTCAATGCTG
CAAAAACAAGGATGGAGGCCTCGAAGAACTATTATCTTCTGTAGTTGGGACGCGGAAGAA
TACGGACTGACAGGGTCAACTGAATGGGTTGAAGAAAACCGGGAGATGTTGTATTCTAGA
GCTGTTGCTTATCTGAATATTGACGTTTCAGTCGTTGGTCCAGGATTCCTGCCTTCTACA
ACTCCCCAACTTGATGAGTTACTTCAGCAAGTAACTAAAGTGGTTCAAGACCCTGATAAT
TCATCTCAGACTGTGTATGATTCATGGATTAAATCGAGCACTCCTCTCCGGGTTCTTAGA
CTAGGTGATGGAGGATCAGACTATTCAGCATTCGTCCAACATGTTGGTATTCCTTCGATG
AATATAATTTTTGGAGAAGGACCAGGATATCCGGTTTACCACTCCTTATATGATGACTAC
GTATGGATGGCGAAATTCGGAGATCCTGCGTTCCGTAGGCATGTGGCAGCTGCTAGCATA
TGGGGAATGATGGCTTTGAGGTTGGCAAATGAAGACATCCTACCCTTCAATTACATGTCC
TATGCAATTGAGCTTGAGGCATACACAAAAACGGTAGAGAATGAAGTGAAGGGAACAACT
GTCACTTGTTCCCCTCTGTACAACTCAATCAGAACTCTCGGAGCGGCAGCTACCAAAGTG
AATAACGAACAAAAGGAACTTCAAAAGCTACTCTTGAGCAAGCAGCTGAACAAGGATTCA
CTGAAAATCCGACAACTCAATGACCGTCTTATGCAGACCGAGCGTGCATTCACTAGCAGG
GAAGGCATCTTCAAGCTAGAATGGTTTAAGCATCTGGTGTATGGACCTTCAGACCAGAAT
GACTGGGATACTGCAGTCTATCCAGGTATAGCCAATGCCATAGCCAGCGCCCGGAGCAGC
AACACTTCGGAGTCCTGGAAGTTTGTACAGCATGAGATCTACAGAGTAGCCAGGGCCGTG
ACACAAGCATCTGCTATACTGAGTGGCCGTCTGACATGA

Peptide Sequence

PEP ID

Zm00001d043519_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:3:202650470:202657105:1 gene:Zm00001d043519 transcript:Zm00001d043519_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M28 family protein
Sequence

MSHLDAASLLAPSPPLAKPHPRSRFLCLISSMLAVLGASLAGLLLFALHPAPNPVPNYAS
LFLSLGSNDTAASHLRALTLHPHVAGTKANALTARYVFDALSALSFPTHITPYSVLLSYP
VHRSLSLSAPGRGVVTSFSLKQETYPNDPYAAAAAETIPTFYAYSASGSVSAEAVYANYG
REEDFSYLASRGVDVAGKVAFARYGRIHCEDIAHNARAAGAAAAVVYTDPLQYGGAPGEG
WFPDSRWLPPSGVQVGSLFRGVGDPTTPMWASSEGCERVSLEEAMNTDDMPLIPALPVSA
QDAMEIHRAMGGAVAPEDWQGREDGPVYRLGPGPAVLNLTYLGNDSMATIENVFAIIEGA
EEPDRYVILGNHRDAWTFGASDPNSGTAAMIELAKRFSMLQKQGWRPRRTIIFCSWDAEE
YGLTGSTEWVEENREMLYSRAVAYLNIDVSVVGPGFLPSTTPQLDELLQQVTKVVQDPDN
SSQTVYDSWIKSSTPLRVLRLGDGGSDYSAFVQHVGIPSMNIIFGEGPGYPVYHSLYDDY
VWMAKFGDPAFRRHVAAASIWGMMALRLANEDILPFNYMSYAIELEAYTKTVENEVKGTT
VTCSPLYNSIRTLGAAATKVNNEQKELQKLLLSKQLNKDSLKIRQLNDRLMQTERAFTSR
EGIFKLEWFKHLVYGPSDQNDWDTAVYPGIANAIASARSSNTSESWKFVQHEIYRVARAV
TQASAILSGRLT

Transcript Sequence

Transcript ID

Zm00001d043519_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:202650470:202657105:1 gene:Zm00001d043519 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M28 family protein
Sequence

AGAGCACTGACTGAGCACACCACCCACCAGCTCCGAAGTCATGTCCCACCTCGACGCGGC
CTCGCTCCTCGCCCCCTCGCCGCCGCTGGCAAAGCCCCACCCGCGCAGCCGCTTCCTCTG
CCTCATCTCCTCCATGCTCGCCGTCCTCGGCGCCTCCCTCGCGGGTCTCCTCTTATTCGC
GCTCCACCCCGCGCCGAACCCGGTCCCGAACTACGCGTCGCTCTTCCTCTCCCTCGGATC
CAACGACACCGCCGCCTCGCACCTCCGAGCGCTCACTCTCCACCCGCACGTCGCGGGGAC
CAAGGCGAACGCCCTCACCGCCCGCTACGTGTTCGACGCGCTCTCCGCGCTCTCCTTCCC
CACCCACATCACGCCTTACTCCGTCCTCCTCTCCTACCCCGTCCACCGCTCCCTCTCCCT
CTCGGCGCCAGGCCGCGGCGTCGTCACCTCCTTCTCCCTAAAGCAGGAGACCTACCCCAA
CGACCCCTACGCAGCAGCCGCGGCGGAGACCATCCCGACGTTCTACGCGTACTCGGCCTC
CGGGTCGGTCTCCGCGGAGGCCGTGTATGCTAACTACGGCCGCGAGGAGGACTTCTCTTA
CCTCGCCTCCCGCGGCGTGGACGTCGCGGGCAAGGTCGCGTTCGCGCGGTACGGGAGGAT
CCACTGCGAGGACATAGCGCACAACGCGCGCGCCGCCGGCGCCGCGGCCGCGGTGGTGTA
CACTGACCCGCTGCAGTACGGCGGCGCACCCGGTGAGGGGTGGTTCCCCGACTCGCGGTG
GCTGCCGCCCAGCGGTGTGCAGGTGGGGAGCCTCTTCCGGGGCGTGGGGGACCCGACGAC
GCCGATGTGGGCATCGTCCGAGGGCTGCGAGCGCGTCAGCTTGGAGGAGGCCATGAATAC
CGATGACATGCCGCTCATCCCAGCCCTGCCGGTATCGGCTCAGGACGCGATGGAGATACA
CAGAGCCATGGGCGGGGCCGTGGCGCCGGAGGACTGGCAGGGCCGTGAAGACGGACCCGT
TTACCGCCTCGGGCCAGGGCCGGCAGTTTTGAACCTGACATATCTTGGGAATGATTCGAT
GGCAACGATTGAGAATGTCTTCGCCATTATCGAGGGCGCCGAAGAGCCCGATAGATATGT
CATTCTTGGTAACCATCGTGATGCTTGGACGTTCGGTGCATCTGATCCCAACAGTGGAAC
AGCAGCTATGATTGAGTTAGCTAAAAGGTTTTCAATGCTGCAAAAACAAGGATGGAGGCC
TCGAAGAACTATTATCTTCTGTAGTTGGGACGCGGAAGAATACGGACTGACAGGGTCAAC
TGAATGGGTTGAAGAAAACCGGGAGATGTTGTATTCTAGAGCTGTTGCTTATCTGAATAT
TGACGTTTCAGTCGTTGGTCCAGGATTCCTGCCTTCTACAACTCCCCAACTTGATGAGTT
ACTTCAGCAAGTAACTAAAGTGGTTCAAGACCCTGATAATTCATCTCAGACTGTGTATGA
TTCATGGATTAAATCGAGCACTCCTCTCCGGGTTCTTAGACTAGGTGATGGAGGATCAGA
CTATTCAGCATTCGTCCAACATGTTGGTATTCCTTCGATGAATATAATTTTTGGAGAAGG
ACCAGGATATCCGGTTTACCACTCCTTATATGATGACTACGTATGGATGGCGAAATTCGG
AGATCCTGCGTTCCGTAGGCATGTGGCAGCTGCTAGCATATGGGGAATGATGGCTTTGAG
GTTGGCAAATGAAGACATCCTACCCTTCAATTACATGTCCTATGCAATTGAGCTTGAGGC
ATACACAAAAACGGTAGAGAATGAAGTGAAGGGAACAACTGTCACTTGTTCCCCTCTGTA
CAACTCAATCAGAACTCTCGGAGCGGCAGCTACCAAAGTGAATAACGAACAAAAGGAACT
TCAAAAGCTACTCTTGAGCAAGCAGCTGAACAAGGATTCACTGAAAATCCGACAACTCAA
TGACCGTCTTATGCAGACCGAGCGTGCATTCACTAGCAGGGAAGGCATCTTCAAGCTAGA
ATGGTTTAAGCATCTGGTGTATGGACCTTCAGACCAGAATGACTGGGATACTGCAGTCTA
TCCAGGTATAGCCAATGCCATAGCCAGCGCCCGGAGCAGCAACACTTCGGAGTCCTGGAA
GTTTGTACAGCATGAGATCTACAGAGTAGCCAGGGCCGTGACACAAGCATCTGCTATACT
GAGTGGCCGTCTGACATGACAGGATTCAAACCATATTCGTTAAAAAAGATTGTTACTGTG
GATTTCGGAAGTTTTGACATTTTTTGAAACTTTCGACTATGAAATATCTGAGTTGCAGAG
AAAGACCGTGCACCACATTAGGGCTTGTTCGTTTTGCTCCAATCCACATGAGATAGGAAT
AACCGAACAAGCCCTTAAAAGGATTTGGTATAGGTCAGAACTTTCCGATAGGGGGTTGGA
AATTTCAACTTGGCATACTTTCC