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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043505_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:202186627:202188359:-1 gene:Zm00001d043505 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine-containing phosphotransfer protein 4
Sequence

ATGGATTATTCTAATTTGCGTCGCCAAGCTGCATCCATGAAAAAGACTCTCTTTGATCAG
GCATGTATTATACTCGATGTGGATATTTCTAATCAATACTTTATCTTTATGCTTGCACAA
GGACCTTTTTCATATGGGTACCTAGATGAGCAATTTTGCCAGGTGGAAGACTTGCAGGAT
GAAGCTAGTCCTAATTTCGCGGAAGAGGTTGTCACTTTGTTTTTCAAGGACTCGGCCAGG
CTAATATCAAATGCTGAACAGGCTCTGGAAAAATACCCCAAAGATTTCAATAGATGGGAT
GCATACATGCAGCAGCTAAAAGGCAGCTGTTCCAGCATTGGTGCTTCAAGGATGAAGAGT
GAGTGCGTGTCATTCCGGGATTACTGCGGACAGGGAAATGTTGAAGGTTGTATGAGATCG
TTCCAGAAAGTGAAGAGGGAGCACGGTGCCCTGAGGCAGAAACTAGAGGCCTATTTCCAG
CTGCTACGACAAGCTGGTCCTGCTGGAGCTGCCACCAGGCCTGGATGTAAGAACTAG

Peptide Sequence

PEP ID

Zm00001d043505_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:202186627:202188359:-1 gene:Zm00001d043505 transcript:Zm00001d043505_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine-containing phosphotransfer protein 4
Sequence

MDYSNLRRQAASMKKTLFDQACIILDVDISNQYFIFMLAQGPFSYGYLDEQFCQVEDLQD
EASPNFAEEVVTLFFKDSARLISNAEQALEKYPKDFNRWDAYMQQLKGSCSSIGASRMKS
ECVSFRDYCGQGNVEGCMRSFQKVKREHGALRQKLEAYFQLLRQAGPAGAATRPGCKN

Transcript Sequence

Transcript ID

Zm00001d043505_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:202186627:202188359:-1 gene:Zm00001d043505 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine-containing phosphotransfer protein 4
Sequence

ATGGATTATTCTAATTTGCGTCGCCAAGCTGCATCCATGAAAAAGACTCTCTTTGATCAG
GCATGTATTATACTCGATGTGGATATTTCTAATCAATACTTTATCTTTATGCTTGCACAA
GGACCTTTTTCATATGGGTACCTAGATGAGCAATTTTGCCAGGTGGAAGACTTGCAGGAT
GAAGCTAGTCCTAATTTCGCGGAAGAGGTTGTCACTTTGTTTTTCAAGGACTCGGCCAGG
CTAATATCAAATGCTGAACAGGCTCTGGAAAAATACCCCAAAGATTTCAATAGATGGGAT
GCATACATGCAGCAGCTAAAAGGCAGCTGTTCCAGCATTGGTGCTTCAAGGATGAAGAGT
GAGTGCGTGTCATTCCGGGATTACTGCGGACAGGGAAATGTTGAAGGTTGTATGAGATCG
TTCCAGAAAGTGAAGAGGGAGCACGGTGCCCTGAGGCAGAAACTAGAGGCCTATTTCCAG
CTGCTACGACAAGCTGGTCCTGCTGGAGCTGCCACCAGGCCTGGATGTAAGAACTAGGAG
TTGCAGGAAAACGGAGTATGACCCAAGAAGATACCTCACTACAACTGACTGGCCCAGTGG
CCCTGCTGCGCAGCAATTAGGGGTCAGCATACGAAGCGAAACAAGAGATGATATGCATGG
ATATGCACAAAACTGTAATAAGAGATTGTTTTTTCAAGAACAAAAAAAAAATCAGAGGAG
AGGAAGGGATGGGAACCTTGTGTAGTGAGTTTACAAGCTTTACTGAAAGATGGTATTATT
GTCTCATGTGTAATATATTCCTTCCATTTTAAAATATATTTATTCTTAGAGTCA