Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043502_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:3:202070455:202100836:1 gene:Zm00001d043502 gene_biotype:protein_coding transcript_biotype:protein_coding description:Golgin candidate 1
Sequence

ATGGCCTCATGGCTCAAGGTCGCCGAAGACTTGCTCGAAGTCGTCGACCGGAGGGCAAAG
ATCGTGGCAACAGAACTGTCGGATGAGCAGTCTACCTCTCAGCCTTCAGGACCAAACAAC
CAAGAAGTGCAAGCAAAGAAGGGAAAGCTGAGGGAGAAGGGTCCATTGAAGCTCACTAAT
GCTGATGGTGGTAACAAGACATCTGCTCAGAAGGAAAGGAGGGGTAGGCAACCGCCACGA
GAGCGGATGAAGATTGAGAAGATCAGACCTTTGCCGCCGGCAGATTCATCAAGTGTTGAT
ACCAGTGCTAGTGAACCAGAAGTCGCTCCCGTTGATGTTAAGAAAGTGTATAATGAGGGT
ACCTTGGAGAAAGGAGAGAAAGCTACCGATGACCTTAAGACTGATGGGTCTGGGACTGTT
GTTAATACCATGGTTGAAGTTCAACTGATGGAGAAAAACTCTTTCAATGCCACTGTGGAT
GGTGTTACACATTCCAATTCGGAGATTGCTGTTGAAAGTTATTCTTCAATTCCCAGTGAA
AAAAGTGGGTCAAACAGCAGTAGCCAGACTGCCAAGATTGACCCAGTGATTAATTTGGAG
AGAGACTCTGCTGTGGCAGTTACCGAGGACAGGAATGTGTCTGAATTGCCAAATACAGAG
GTTATGGGCAAACCGGAAGAATCAAAGAAAGAGAATGTTTCAGATTCACCAGAAAGCATA
GAAGATCGACACGAACAGAAATCAGATTCAATTTCTGTGAAAGAACAAGACCAACTTGAG
GAGGCTCAGGGATTGTTAAAAAGTGCTGTCAAGACCGGCCAATCAAAAGAAGCTAGGTTA
GCTCGGGTTTGTGCTGGGCTTTCATCTCGCCTCCAAGAGTATAAGTCTGAAAATGCACAG
CTGGAGGAACTTCTTGTTCAAGAGAGAGAGAAATCTACCTCGCATGAAGCTCACATAAAG
CAACTACAACAAGAACTATCAATGTCCAGAGTAGAAGGTTCAAGAGCCGAATCGAATATG
GTTGATGCTTTGACTGCAAAAAATGCAGAGATTGAATCTCTTGTCAAATCATTGGACTCT
TGGAAGAAAAGAGCAGCAGCTTCAGAAGAAAAGCTTGCTTCTTTAGAGGAAGATATGGAT
GGTCTCAAGAGGAACCGGGAACTTACTGAAACCAGGGTTATACAGGCTTTACGGGAGGAA
CTTGCTACCGCAGAGCGTAGGGCTGAAGAAGAGCGCATTTCTCATAATGCCACAAAGATG
GCAGCTGTTGAGAGAGAAGTAGAATTAGAACATCGAGCTGTTGAGGCATCAAATGCTCTA
GCTAGAATCCAGAGAGCTGCTGATCAAAGCTCATCAAGAGTGCTGGAATTGGAGCACAAG
GTGGCTGTGCTTGAGGTTGAATATGCTTCATTGCAACAAGAACTGCAGGAGATGGAAGCT
CGTAACCGCCGCACACAGAAAAAACCTTCAGAAGAAGCCAATCAAGTTCTTCAGATGCAG
GCTTGGCAGGAAGAAGTTGAGCGTGCACGCCAAAGCCAACGAGAGGCAGAAGCAAAGATA
TCATCGTTGGAGGCTGAGTTACAGAAAATGAGAGTTGAAATGGCTGGAATGAGAAGAGAT
GCAGAGCATTATTCTAGACAGGAGCATGTTGAGCTTGAGAAGAGATACCGGGAGCTAACT
GACTTGCTGTACCACAAGCAAACACAATTAGAATCCATGGCCAGCGAAAAGGCCGGATTG
GAGTTCCAACTGGAGAAATCATTGAAACAATTTCGTGAAGTGCAGGTCGAAGCAGAAAGG
AGTAAAGCTACTCGCAGATCAGCATCATCGTGGGAAGAAGATACTGATATCAAGGCATTA
GAGCCTCTTCCTCTACATCATCGGCACATGGCAACAGCAAATCATCAGGTAGATATGACC
AGTGCTAGTATGAAGATTTACACCCTTTTAAATTGTAGGAAATCAATTGTCAAGATTAAC
ATCCTTTTCTATATACATCTTTGTTCCAGTTACAAAAGGCTGCGAAGCTTTTAG

Peptide Sequence

PEP ID

Zm00001d043502_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:3:202070455:202100836:1 gene:Zm00001d043502 transcript:Zm00001d043502_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Golgin candidate 1
Sequence

MASWLKVAEDLLEVVDRRAKIVATELSDEQSTSQPSGPNNQEVQAKKGKLREKGPLKLTN
ADGGNKTSAQKERRGRQPPRERMKIEKIRPLPPADSSSVDTSASEPEVAPVDVKKVYNEG
TLEKGEKATDDLKTDGSGTVVNTMVEVQLMEKNSFNATVDGVTHSNSEIAVESYSSIPSE
KSGSNSSSQTAKIDPVINLERDSAVAVTEDRNVSELPNTEVMGKPEESKKENVSDSPESI
EDRHEQKSDSISVKEQDQLEEAQGLLKSAVKTGQSKEARLARVCAGLSSRLQEYKSENAQ
LEELLVQEREKSTSHEAHIKQLQQELSMSRVEGSRAESNMVDALTAKNAEIESLVKSLDS
WKKRAAASEEKLASLEEDMDGLKRNRELTETRVIQALREELATAERRAEEERISHNATKM
AAVEREVELEHRAVEASNALARIQRAADQSSSRVLELEHKVAVLEVEYASLQQELQEMEA
RNRRTQKKPSEEANQVLQMQAWQEEVERARQSQREAEAKISSLEAELQKMRVEMAGMRRD
AEHYSRQEHVELEKRYRELTDLLYHKQTQLESMASEKAGLEFQLEKSLKQFREVQVEAER
SKATRRSASSWEEDTDIKALEPLPLHHRHMATANHQVDMTSASMKIYTLLNCRKSIVKIN
ILFYIHLCSSYKRLRSF

Transcript Sequence

Transcript ID

Zm00001d043502_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:202070455:202100836:1 gene:Zm00001d043502 gene_biotype:protein_coding transcript_biotype:protein_coding description:Golgin candidate 1
Sequence

ACACCACCCAATTCATCAAGCTCACTCGCCGTCACACCGCGCTACCAGCGGGGATTCCGC
CATGGCCTCATGGCTCAAGGTCGCCGAAGACTTGCTCGAAGTCGTCGACCGGAGGGCAAA
GATCGTGGCAACAGAACTGTCGGATGAGCAGTCTACCTCTCAGCCTTCAGGACCAAACAA
CCAAGAAGTGCAAGCAAAGAAGGGAAAGCTGAGGGAGAAGGGTCCATTGAAGCTCACTAA
TGCTGATGGTGGTAACAAGACATCTGCTCAGAAGGAAAGGAGGGGTAGGCAACCGCCACG
AGAGCGGATGAAGATTGAGAAGATCAGACCTTTGCCGCCGGCAGATTCATCAAGTGTTGA
TACCAGTGCTAGTGAACCAGAAGTCGCTCCCGTTGATGTTAAGAAAGTGTATAATGAGGG
TACCTTGGAGAAAGGAGAGAAAGCTACCGATGACCTTAAGACTGATGGGTCTGGGACTGT
TGTTAATACCATGGTTGAAGTTCAACTGATGGAGAAAAACTCTTTCAATGCCACTGTGGA
TGGTGTTACACATTCCAATTCGGAGATTGCTGTTGAAAGTTATTCTTCAATTCCCAGTGA
AAAAAGTGGGTCAAACAGCAGTAGCCAGACTGCCAAGATTGACCCAGTGATTAATTTGGA
GAGAGACTCTGCTGTGGCAGTTACCGAGGACAGGAATGTGTCTGAATTGCCAAATACAGA
GGTTATGGGCAAACCGGAAGAATCAAAGAAAGAGAATGTTTCAGATTCACCAGAAAGCAT
AGAAGATCGACACGAACAGAAATCAGATTCAATTTCTGTGAAAGAACAAGACCAACTTGA
GGAGGCTCAGGGATTGTTAAAAAGTGCTGTCAAGACCGGCCAATCAAAAGAAGCTAGGTT
AGCTCGGGTTTGTGCTGGGCTTTCATCTCGCCTCCAAGAGTATAAGTCTGAAAATGCACA
GCTGGAGGAACTTCTTGTTCAAGAGAGAGAGAAATCTACCTCGCATGAAGCTCACATAAA
GCAACTACAACAAGAACTATCAATGTCCAGAGTAGAAGGTTCAAGAGCCGAATCGAATAT
GGTTGATGCTTTGACTGCAAAAAATGCAGAGATTGAATCTCTTGTCAAATCATTGGACTC
TTGGAAGAAAAGAGCAGCAGCTTCAGAAGAAAAGCTTGCTTCTTTAGAGGAAGATATGGA
TGGTCTCAAGAGGAACCGGGAACTTACTGAAACCAGGGTTATACAGGCTTTACGGGAGGA
ACTTGCTACCGCAGAGCGTAGGGCTGAAGAAGAGCGCATTTCTCATAATGCCACAAAGAT
GGCAGCTGTTGAGAGAGAAGTAGAATTAGAACATCGAGCTGTTGAGGCATCAAATGCTCT
AGCTAGAATCCAGAGAGCTGCTGATCAAAGCTCATCAAGAGTGCTGGAATTGGAGCACAA
GGTGGCTGTGCTTGAGGTTGAATATGCTTCATTGCAACAAGAACTGCAGGAGATGGAAGC
TCGTAACCGCCGCACACAGAAAAAACCTTCAGAAGAAGCCAATCAAGTTCTTCAGATGCA
GGCTTGGCAGGAAGAAGTTGAGCGTGCACGCCAAAGCCAACGAGAGGCAGAAGCAAAGAT
ATCATCGTTGGAGGCTGAGTTACAGAAAATGAGAGTTGAAATGGCTGGAATGAGAAGAGA
TGCAGAGCATTATTCTAGACAGGAGCATGTTGAGCTTGAGAAGAGATACCGGGAGCTAAC
TGACTTGCTGTACCACAAGCAAACACAATTAGAATCCATGGCCAGCGAAAAGGCCGGATT
GGAGTTCCAACTGGAGAAATCATTGAAACAATTTCGTGAAGTGCAGGTCGAAGCAGAAAG
GAGTAAAGCTACTCGCAGATCAGCATCATCGTGGGAAGAAGATACTGATATCAAGGCATT
AGAGCCTCTTCCTCTACATCATCGGCACATGGCAACAGCAAATCATCAGGTAGATATGAC
CAGTGCTAGTATGAAGATTTACACCCTTTTAAATTGTAGGAAATCAATTGTCAAGATTAA
CATCCTTTTCTATATACATCTTTGTTCCAGTTACAAAAGGCTGCGAAGCTTTTAGATACA
GGCGCTGTTCGTGCAACAAGATTTTTGTGGCGACACCCCGTTGCACGAGTCAGCGTGCTA
TTCTATCTGGCATGAACCACATAACTTCAATTTCCTGTGTTTACCCTCCCC