Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043442_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:200059008:200062529:-1 gene:Zm00001d043442 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:carotenoid cleavage dioxygenase8 description: carotenoid cleavage dioxygenase8
Sequence	ATGTCTCCCACTATGGCTTCGTCGTTGTGCGTATTTGCAGCGATGTCTGGCGCCAGCGGC AGGCCGTCGGCCGGTGGCTCGGCGGTACCGGGCCGTCTGTCCAGCAGCACACAGGGGGGC AAGGGAAAGCGGGCCGTGGTGCAGCCGCTCGCGGCTAGCGTGGTGACGGAGACGCCAGCG CCGGCCGTAGCTCCGGCTCGGCCCGTCGTCGACGCCCCGCCGCGCCGCCGTGGGGGCCGC GGCACCGTCGAGCACGCGGCGTGGAAGAGCGTCCGGCAGGAGAGGTGGGAGGGGGCGCTG GAGCTGGAGGGAGAGCTGCCGCTCTGGCTGGATGGCACCTACCTGAGGAACGGGCCGGGC CTGTGGAACCTGGGCGACTACGGCTTCCGGCACCTGTTCGACGGCTACGCCACGCTGGTC CGCGTGTCGTTCCGCGACGGGCAGGCGGTGGGCGCGCACCGGCAGATCGAGTCGGAGGCG TACAAGGCGGCGCGCGCGCACGGCAAGGTGTGCTACCGCGAGTTCTCGGAGGTGCCCAAG GCGGAGGGGTTCCTCTCCCACGTGGGCCAGCTCGCCACCCTCTTCTCGGGCTCCTCGCTC ACCGACAACTCCAACACGGGCGTCGTCAGGCTCGGCGACGGCCGCGTCCTCTGCCTGACA GAGACCATCAAGGGCTCCATCGTGGTCGACCCGGACACGCTCGACACCATCGGCAAGTTC GAGTACACGGACAGGCTGGGCGGCCTCATCCACTCGGCGCACCCCATCGTGACGGACACC GAGTTCTGGACGCTCATCCCGGACCTCATCCGCCCGGGCTACTCGGTGGTGAGGATGGAC GCCGGGACCAACGAGCGGCGGTTCGTCGGCAGGGTGGACTGTCGGGGCGGGCCGGCGCCC GGGTGGGTGCACTCGTTCCCCATCACCGACCACTACGTGGTGGTGCCGGAGATGCCGCTC CGGTACTGCGCCAGGAACCTCCTCCGCGCGGAGCCCACGCCGCTGTACAAGTTCGAGTGG CACCTCGAGTCCGGCAGCTACATGCACGTCATGTGCAAGGCTAGCGGCAGGGTCGTGGCG ACCGTGGAGGTGCCGCCGTTCGTCACGTTCCACTTCATCAACGCGTACGAGGAGAAGGAC GACGAGGGCCGCGTCACCGCGATCATCGCCGACTGCTGCGAGCACAACGCCAACACCTCC ATCCTCGACAAGCTCCGGCTCCAGAACCTGCGCTCTTCCACCGGCCAGGACGTCCTCCCC GACGCCAGGGTGGGCCGCTTCAGGATCCCGCTGGACGGGAGCCCGTTCGGCGAGCTGGAG CCGGCGCTGGACCCGGACCAGCACGGCCGCGGGATGGACATGTGCAGCATCAACCCGGCC CACGTCGGCAAGAAGTACCGGTACGCCTACGCCTGCGGAGCCCACCGGCCGTGCAACTTC CCCAACACCCTCACCAAGATCGACCTGGTGGAGAAGACGGCCAAGAACTGGTACGAGGAG GGCGCCGTGCCGTCAGAGCCCTTCTTCGTGCCGCGCCCCGGCGCCGTGGAGGAGGACGAC GGCGTCGCGATCTCGATGGTGAGCGCCAAGGACGGATCGGCCTACGCGTTGGTGCTGGAC GCCAAGACGTTCCACGAGATCGCGCGGGCCAAGTTCCCGTACGCGATGCCCTACGGCTTG CACTGCTGCTGGGTGCCTAGGAGTACCTCAGACGCGTAG

Peptide Sequence

PEP ID	Zm00001d043442_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:200059008:200062529:-1 gene:Zm00001d043442 transcript:Zm00001d043442_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:carotenoid cleavage dioxygenase8 description: carotenoid cleavage dioxygenase8
Sequence	MSPTMASSLCVFAAMSGASGRPSAGGSAVPGRLSSSTQGGKGKRAVVQPLAASVVTETPA PAVAPARPVVDAPPRRRGGRGTVEHAAWKSVRQERWEGALELEGELPLWLDGTYLRNGPG LWNLGDYGFRHLFDGYATLVRVSFRDGQAVGAHRQIESEAYKAARAHGKVCYREFSEVPK AEGFLSHVGQLATLFSGSSLTDNSNTGVVRLGDGRVLCLTETIKGSIVVDPDTLDTIGKF EYTDRLGGLIHSAHPIVTDTEFWTLIPDLIRPGYSVVRMDAGTNERRFVGRVDCRGGPAP GWVHSFPITDHYVVVPEMPLRYCARNLLRAEPTPLYKFEWHLESGSYMHVMCKASGRVVA TVEVPPFVTFHFINAYEEKDDEGRVTAIIADCCEHNANTSILDKLRLQNLRSSTGQDVLP DARVGRFRIPLDGSPFGELEPALDPDQHGRGMDMCSINPAHVGKKYRYAYACGAHRPCNF PNTLTKIDLVEKTAKNWYEEGAVPSEPFFVPRPGAVEEDDGVAISMVSAKDGSAYALVLD AKTFHEIARAKFPYAMPYGLHCCWVPRSTSDA

Transcript Sequence

Transcript ID	Zm00001d043442_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:200059008:200062529:-1 gene:Zm00001d043442 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:carotenoid cleavage dioxygenase8 description: carotenoid cleavage dioxygenase8
Sequence	AAACCAAGCCAGATCATACTAGTACACACCACACTCCCCCGGCTAGCACCGTGCTCTCTA GCTAGCTAGCTAAGCTACTACTGCCCTCTCCTTTCCAGGCGACTTTGCAACCCTAGCAAG AGCATTTTCGCCATGTCTCCCACTATGGCTTCGTCGTTGTGCGTATTTGCAGCGATGTCT GGCGCCAGCGGCAGGCCGTCGGCCGGTGGCTCGGCGGTACCGGGCCGTCTGTCCAGCAGC ACACAGGGGGGCAAGGGAAAGCGGGCCGTGGTGCAGCCGCTCGCGGCTAGCGTGGTGACG GAGACGCCAGCGCCGGCCGTAGCTCCGGCTCGGCCCGTCGTCGACGCCCCGCCGCGCCGC CGTGGGGGCCGCGGCACCGTCGAGCACGCGGCGTGGAAGAGCGTCCGGCAGGAGAGGTGG GAGGGGGCGCTGGAGCTGGAGGGAGAGCTGCCGCTCTGGCTGGATGGCACCTACCTGAGG AACGGGCCGGGCCTGTGGAACCTGGGCGACTACGGCTTCCGGCACCTGTTCGACGGCTAC GCCACGCTGGTCCGCGTGTCGTTCCGCGACGGGCAGGCGGTGGGCGCGCACCGGCAGATC GAGTCGGAGGCGTACAAGGCGGCGCGCGCGCACGGCAAGGTGTGCTACCGCGAGTTCTCG GAGGTGCCCAAGGCGGAGGGGTTCCTCTCCCACGTGGGCCAGCTCGCCACCCTCTTCTCG GGCTCCTCGCTCACCGACAACTCCAACACGGGCGTCGTCAGGCTCGGCGACGGCCGCGTC CTCTGCCTGACAGAGACCATCAAGGGCTCCATCGTGGTCGACCCGGACACGCTCGACACC ATCGGCAAGTTCGAGTACACGGACAGGCTGGGCGGCCTCATCCACTCGGCGCACCCCATC GTGACGGACACCGAGTTCTGGACGCTCATCCCGGACCTCATCCGCCCGGGCTACTCGGTG GTGAGGATGGACGCCGGGACCAACGAGCGGCGGTTCGTCGGCAGGGTGGACTGTCGGGGC GGGCCGGCGCCCGGGTGGGTGCACTCGTTCCCCATCACCGACCACTACGTGGTGGTGCCG GAGATGCCGCTCCGGTACTGCGCCAGGAACCTCCTCCGCGCGGAGCCCACGCCGCTGTAC AAGTTCGAGTGGCACCTCGAGTCCGGCAGCTACATGCACGTCATGTGCAAGGCTAGCGGC AGGGTCGTGGCGACCGTGGAGGTGCCGCCGTTCGTCACGTTCCACTTCATCAACGCGTAC GAGGAGAAGGACGACGAGGGCCGCGTCACCGCGATCATCGCCGACTGCTGCGAGCACAAC GCCAACACCTCCATCCTCGACAAGCTCCGGCTCCAGAACCTGCGCTCTTCCACCGGCCAG GACGTCCTCCCCGACGCCAGGGTGGGCCGCTTCAGGATCCCGCTGGACGGGAGCCCGTTC GGCGAGCTGGAGCCGGCGCTGGACCCGGACCAGCACGGCCGCGGGATGGACATGTGCAGC ATCAACCCGGCCCACGTCGGCAAGAAGTACCGGTACGCCTACGCCTGCGGAGCCCACCGG CCGTGCAACTTCCCCAACACCCTCACCAAGATCGACCTGGTGGAGAAGACGGCCAAGAAC TGGTACGAGGAGGGCGCCGTGCCGTCAGAGCCCTTCTTCGTGCCGCGCCCCGGCGCCGTG GAGGAGGACGACGGCGTCGCGATCTCGATGGTGAGCGCCAAGGACGGATCGGCCTACGCG TTGGTGCTGGACGCCAAGACGTTCCACGAGATCGCGCGGGCCAAGTTCCCGTACGCGATG CCCTACGGCTTGCACTGCTGCTGGGTGCCTAGGAGTACCTCAGACGCGTAGCGCTAGCAG ATCGTTCGACTCTGCTGCTCACATCTCCCACACCGTACGTGCCGACTCGACCGACAGACA TGGGCATAGTAGTACAAACAGAAAGGTGTCTCTGCTGCTTTATTTCCTGGCCTTCGGCTG AATGGGAAAAAGGTATACACGTCGTAGTGATGTATTGACAGACATCGTATACGTCTTCCC AGCAAAATGTGGCTGTAGCAATTACACGCGTTTAATTGTACAGAGCTAGCTCATGTGAGC GAGCCCATAGTATTGTTCATTATGTACACATGTAGTACAGTGTTTTGTTTTTTTAAAAAA GATGCCCAGTACAGTAATATTCCTTCGTCGT