Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d043439_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:3:199911065:199919663:1 gene:Zm00001d043439 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP85
Sequence	ATGATGCCCCGCATGAGACCGAATTTGCCAACTGGTAAATTAGGCCAGTGCTGCAAAACA AGACCTGATTTTATCAAGGCATGGGAAAAGTGGCGAGGTCAAGTAACTAAACTGGAGTGC AGTGCATTTTGGATCCAGTGCGGCCACCAAAAAACCCGTGATGGTTTGAAGAATTTGCTT CATATTATGATGGGGAACATAAAGGAAGTCACACATGCTATGGAACTTCTGACAGCTGAT AATGACTATGCGGATATTATGTTGCATGAAGAGCGACCTAACTTAGGCGGTATAAGCATA GAGGAACTTCACCGATTAGTCTATGCTCAAGTTTTATGTTGTCATCCTTTAACTTGGCAG ATCGCGCCGACTTATCTGTCCTCATGTCTAAACCAAGGCCTAGGACTCTTGGAGATTCTA CTTCTTAAGCAACCCATACAAGATAATTGCCTAGTACTCAAGACTTTGGAAATTTGCCGA TTGTACGAACTGGAGAATGTTAGTACAATCATCATGAAGATTGCTGGCATTTATCGTTGG AAGCATGGACGAAAAGGAACTGGTGTATACTGGTTCCAGCAAGCTCGTGATAAAGTTTGT CTTGATAGAATTGCTCAACAGTTATTCGAACACATTGGGAAGTCAGTGACAGACGATAGT TTTAAGCAATGGGAAGGGCTGCTCGAGCTCCTTGGTTCTGACATTGGTAGTGCAGGCGGT CTTGAGTTCCTTCACAGGTACCGGGATTTCAAGAGGTCTCTGCAACAAGCTCTAGACAGA AGGTGTGGTGAGGCTGCTCGACAAACTGTGGATTTTTTAATACAGCTTATGAAAAACCCA TCCACACCTCAACGTTTCTGGCTACCCCTTCTACATGATTCGGTGGAGCTACTTAATAGC AAACTCAGCCCTCTTATGGATGTTGCTGAGACGACATTGTTGCTCAACAAGCTGCAAGAG CTGTCAATGGCCAAGCTGCGCCCTGATTTTTCCAGTAATCACCTACCAAGCCATGCGATG AGCTCTGTGAGATTGGCTCTGGCATCAAATCTGGCACGTGCCGTTCTTGAAGACCGTAGT CCAAGCACACTTTAG

Peptide Sequence

PEP ID	Zm00001d043439_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:3:199911065:199919663:1 gene:Zm00001d043439 transcript:Zm00001d043439_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP85
Sequence	MMPRMRPNLPTGKLGQCCKTRPDFIKAWEKWRGQVTKLECSAFWIQCGHQKTRDGLKNLL HIMMGNIKEVTHAMELLTADNDYADIMLHEERPNLGGISIEELHRLVYAQVLCCHPLTWQ IAPTYLSSCLNQGLGLLEILLLKQPIQDNCLVLKTLEICRLYELENVSTIIMKIAGIYRW KHGRKGTGVYWFQQARDKVCLDRIAQQLFEHIGKSVTDDSFKQWEGLLELLGSDIGSAGG LEFLHRYRDFKRSLQQALDRRCGEAARQTVDFLIQLMKNPSTPQRFWLPLLHDSVELLNS KLSPLMDVAETTLLLNKLQELSMAKLRPDFSSNHLPSHAMSSVRLALASNLARAVLEDRS PSTL

Transcript Sequence

Transcript ID	Zm00001d043439_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:199911065:199919663:1 gene:Zm00001d043439 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP85
Sequence	GGATTGGTCGAGGCTGTTGCTGTTCTTGTATCAATGATGCCCCGCATGAGACCGAATTTG CCAACTGGTAAATTAGGCCAGTGCTGCAAAACAAGACCTGATTTTATCAAGGCATGGGAA AAGTGGCGAGGTCAAGTAACTAAACTGGAGTGCAGTGCATTTTGGATCCAGTGCGGCCAC CAAAAAACCCGTGATGGTTTGAAGAATTTGCTTCATATTATGATGGGGAACATAAAGGAA GTCACACATGCTATGGAACTTCTGACAGCTGATAATGACTATGCGGATATTATGTTGCAT GAAGAGCGACCTAACTTAGGCGGTATAAGCATAGAGGAACTTCACCGATTAGTCTATGCT CAAGTTTTATGTTGTCATCCTTTAACTTGGCAGATCGCGCCGACTTATCTGTCCTCATGT CTAAACCAAGGCCTAGGACTCTTGGAGATTCTACTTCTTAAGCAACCCATACAAGATAAT TGCCTAGTACTCAAGACTTTGGAAATTTGCCGATTGTACGAACTGGAGAATGTTAGTACA ATCATCATGAAGATTGCTGGCATTTATCGTTGGAAGCATGGACGAAAAGGAACTGGTGTA TACTGGTTCCAGCAAGCTCGTGATAAAGTTTGTCTTGATAGAATTGCTCAACAGTTATTC GAACACATTGGGAAGTCAGTGACAGACGATAGTTTTAAGCAATGGGAAGGGCTGCTCGAG CTCCTTGGTTCTGACATTGGTAGTGCAGGCGGTCTTGAGTTCCTTCACAGGTACCGGGAT TTCAAGAGGTCTCTGCAACAAGCTCTAGACAGAAGGTGTGGTGAGGCTGCTCGACAAACT GTGGATTTTTTAATACAGCTTATGAAAAACCCATCCACACCTCAACGTTTCTGGCTACCC CTTCTACATGATTCGGTGGAGCTACTTAATAGCAAACTCAGCCCTCTTATGGATGTTGCT GAGACGACATTGTTGCTCAACAAGCTGCAAGAGCTGTCAATGGCCAAGCTGCGCCCTGAT TTTTCCAGTAATCACCTACCAAGCCATGCGATGAGCTCTGTGAGATTGGCTCTGGCATCA AATCTGGCACGTGCCGTTCTTGAAGACCGTAGTCCAAGCACACTTTAGCACAGGAGTATG ACGTCCAGTTTGCTGGTGGATTGTGACCATGTTTGCTTGGGGCCTCCTGACAATTCAAAT GATCGGGTTTGAGAAAGATTGACCATGTAACATACATTGTACTCTGCTTGCTTGCTTAGT GCATTTGTGTCGCGAATGCATGCATCATGCTGAGCGCTGTGGTTTGAAGGAAAGAAATAA AGGATCGACATGTTGCTT