Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043434_T052
CDS Infomation

cds chromosome:B73_RefGen_v4:3:199737827:199758443:-1 gene:Zm00001d043434 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger CCCH domain-containing protein 19
Sequence

ATGTCCGACGCTGAGCCACCTCCTGCAATGGAGGAGGCCACGCTGACAACGCCGGATGTT
GTGCTAGGCGAGGGATACAAAGATATCGAGGGTCAGAAGGATGGCCGAACTTGTTATGGT
GAAGGTGGCGATGTTATAGTGGCTGATGAGTTCGCGGGTATTGTTGAAGACCCCAACCAA
CCCGATGTTTTTAAGGCTAAAGAGCCAGAGGAGGGTGTTGATGTAGGGGGGCAAACTAAT
GTCATTAGTGCTGCTGTGTCATCCTCCACACTGGTGGATGATCCCATGGAGGTTGGCATG
CAAACCAAAGAGGTTAGTGCTGCTGCGGATGATCTCATAGAGGTGGGTGCTGCCCTGGTA
CCATCTGCACAGGATCACACAGCAGTGGCTGCTTGCCTGGTTAATGATGACTGCAATATA
GTTATCACTGGTGGTGTGCATAGGTCGGATGACCAAACTGTTCAGGAGTTTGGGGGTGAC
TCCCTTGACGCTGATGAGGTTGCTCCCTTGGTAAATGATGTACAAGATGACAGTGCAAGG
ATTGATATGGATGTTGCAGCTAATGATCATGTGCATGCTCAGGATCAGGAAAGCTCACAG
TTGGATGTGGCTACAGCTCTGTTAAATGAGGTGGAAACAGAGATTGCCGAAGCTGGAGAC
CATGTTGTACAGGACTGCACAAATATGGATATGCAGATCCAAACTGGAGATGACAAACAT
GTTGGCACTATTGCGGACACTGCCACAGATGAGGAGGGCAAGCACATGGGTGAAGATACC
ATGGGCAGAGATGGTAGTGAGAAACATGATGGGGCAGTCGGTGTTGATGTGTCTGATGAG
AGGGTAGAAATGGGTAGGGGTGGACTGTCTGGAGATGATAACGAGCAAAAGGAAGTTGCA
ACAGCTGATGAAGATCGTGTGGAAGAGGAAGACATGCAGGTGGATGCCGTAAGCATTACT
GGAGACATGGTTGAGGAAGGCAGAATTGCTGTTGAATACATTGCAGGCGAAGCTGTAAAT
GGCAAGGATGGTATTGATGTCCCTGAAGAAAAGACTCCTCAGATAGACAAGGCTGGTAAT
GATATCCCTGAAGAAGAGGGTCTCCAAATGGGGGGAGCTGGCTTGATTGGCAATAAAAAT
GGGCCGAAAGAGGCTGTGATAGCTGATTACCATGGAGTGGAAGAAAATACCATACTGATG
GAGGCAGCTACCACGACTAACAATGATGATGATGATGACAACAAAATTGTTGGTGAAGAT
GTTGCAGAAGCTGTCAATGACATAACTGGTGATGGTGTCCCTGAACAAGAGGCTGCACAT
ATGGATGACGATGATGACGATGAGCCACCTCCTTTAGTGGCAAAGAAAGGTGGAGGGCGT
CGTAAGAGGGGCCGTCCATCTTCCAAGGTCCAGGCTGTGGTGAAACCATCTGTAAAGGGG
AAAGATGAAGAGGAGGTTTGCTTCATTTGCTTTGATGGTGGTGATCTTGTGATTTGTGAT
CGTAGGGGCTGCCCTAAAGCTTACCATCCTTCTTGTGTTAATCGGGATGACGACTTCTTC
AAGTCAAAGGGTCGGTGGAACTGTGGGTGGCACATTTGTAGCAACTGTCAGAAACCTGCC
CGCCATATGTGCTACACCTGCACCTTTTCATTATGCAAGGCATGCATGAAAGATGCAAAG
TTTAGCTGTGTCAGAGAAAACAAGGGCTTTTGTGCTACGTGCATGAACACTGTGATGTTG
ATAGAGAACAGAGAGGAGGCTGCAGACCCAATGGAGGTGGATTTTGATGACAAAAGCAGC
TGGTGGTATTTGTTCAAGGACTATTGGTTAAATTTGAAGACAAACTTGTCATTGACAGTT
GAGGAAATATCAGCAGCCAAGTCTCAAAAGAGTGGAGAATTACCTGATACTAATGACGAA
ATTAATTCAGAGAGTTCATCAGGGCGTCATCTAGAAAACAATACATCGAAAAAGAGGGGC
AGGAACCGATCTAAACAAGCTGCCATCGAGCAGGGCTCTGAAGGAAAAGAGACCACTGGG
AAATCTGCCAAACTAGGTCTGTCAGGCATTCGTGATGCTCAGACTTCTTCAGGGAAAAAG
GTTAGAAAATTATCCAGGCGTTCTTTGAGCAGCCAGCATTCACCAAAAGATTCTGAAAGT
GTTGGGACATCAACATCCTCAGCTGACGAGGTCAGCTGGGCTTCTAAGGAGCTCATAAAC
TTTGTAGCTCATGCGAGAAATGGTGATAAATCTGTGATCAATCAGTATGACGTCCAACCC
CTTTTACTTGACTATATCAAACGCAACAATCTGCGCGATCCTCGTCGGAAAAGCCAGATA
ATTTGTGATTCTTTGCTCCAAAGTCTCTTCGGGAAAGACCGTGTTGGGCATTTTGAGATG
CTTAAGCTTCTTGAATCACATTTTCCCACGAGTGAGGTTTCACCAATTGATGCTGATGAA
AATCATGGTGGTGTAGTAGACCCTGATCCTAGTCAGGATGCTGATGGTAACAGTGAAGCT
TCAGTTGTTATGAGTTCAGAAAAAAGAAGAAAATCACGTAAGTATGACCTGAAACATCAG
CCTAATATCGATGACTATGCGGCAATAGATAACCATAACATTGGCTTGATGTACTTACGT
CGCAACCTAATGGAAGAATTGATTGATGACGTTGACACTTTTGATGAGAAAGTTGTTGGA
TCGTTTGTGAGAATAAGAATTCCTGGTACAGGGCAAAGACAGGACATTTATAGACTTGTA
CAAATTGTTGGCACTGGAAGATCTGCAGAAAAATATAAATCT

Peptide Sequence

PEP ID

Zm00001d043434_P052
PEP Infomation

pep chromosome:B73_RefGen_v4:3:199737827:199758443:-1 gene:Zm00001d043434 transcript:Zm00001d043434_T052 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger CCCH domain-containing protein 19
Sequence

MSDAEPPPAMEEATLTTPDVVLGEGYKDIEGQKDGRTCYGEGGDVIVADEFAGIVEDPNQ
PDVFKAKEPEEGVDVGGQTNVISAAVSSSTLVDDPMEVGMQTKEVSAAADDLIEVGAALV
PSAQDHTAVAACLVNDDCNIVITGGVHRSDDQTVQEFGGDSLDADEVAPLVNDVQDDSAR
IDMDVAANDHVHAQDQESSQLDVATALLNEVETEIAEAGDHVVQDCTNMDMQIQTGDDKH
VGTIADTATDEEGKHMGEDTMGRDGSEKHDGAVGVDVSDERVEMGRGGLSGDDNEQKEVA
TADEDRVEEEDMQVDAVSITGDMVEEGRIAVEYIAGEAVNGKDGIDVPEEKTPQIDKAGN
DIPEEEGLQMGGAGLIGNKNGPKEAVIADYHGVEENTILMEAATTTNNDDDDDNKIVGED
VAEAVNDITGDGVPEQEAAHMDDDDDDEPPPLVAKKGGGRRKRGRPSSKVQAVVKPSVKG
KDEEEVCFICFDGGDLVICDRRGCPKAYHPSCVNRDDDFFKSKGRWNCGWHICSNCQKPA
RHMCYTCTFSLCKACMKDAKFSCVRENKGFCATCMNTVMLIENREEAADPMEVDFDDKSS
WWYLFKDYWLNLKTNLSLTVEEISAAKSQKSGELPDTNDEINSESSSGRHLENNTSKKRG
RNRSKQAAIEQGSEGKETTGKSAKLGLSGIRDAQTSSGKKVRKLSRRSLSSQHSPKDSES
VGTSTSSADEVSWASKELINFVAHARNGDKSVINQYDVQPLLLDYIKRNNLRDPRRKSQI
ICDSLLQSLFGKDRVGHFEMLKLLESHFPTSEVSPIDADENHGGVVDPDPSQDADGNSEA
SVVMSSEKRRKSRKYDLKHQPNIDDYAAIDNHNIGLMYLRRNLMEELIDDVDTFDEKVVG
SFVRIRIPGTGQRQDIYRLVQIVGTGRSAEKYKS

Transcript Sequence

Transcript ID

Zm00001d043434_T052
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:199737827:199758443:-1 gene:Zm00001d043434 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger CCCH domain-containing protein 19
Sequence

GCCGCGCGCACACGTCCGCCAGATGGTGTGTAGTAGCGGTGGTTGGGAATATCTAATCAC
CCAAATCCTGGTCTGACACTGTTCCACTGATAGAATCAGTATGTCCGACGCTGAGCCACC
TCCTGCAATGGAGGAGGCCACGCTGACAACGCCGGATGTTGTGCTAGGCGAGGGATACAA
AGATATCGAGGGTCAGAAGGATGGCCGAACTTGTTATGGTGAAGGTGGCGATGTTATAGT
GGCTGATGAGTTCGCGGGTATTGTTGAAGACCCCAACCAACCCGATGTTTTTAAGGCTAA
AGAGCCAGAGGAGGGTGTTGATGTAGGGGGGCAAACTAATGTCATTAGTGCTGCTGTGTC
ATCCTCCACACTGGTGGATGATCCCATGGAGGTTGGCATGCAAACCAAAGAGGTTAGTGC
TGCTGCGGATGATCTCATAGAGGTGGGTGCTGCCCTGGTACCATCTGCACAGGATCACAC
AGCAGTGGCTGCTTGCCTGGTTAATGATGACTGCAATATAGTTATCACTGGTGGTGTGCA
TAGGTCGGATGACCAAACTGTTCAGGAGTTTGGGGGTGACTCCCTTGACGCTGATGAGGT
TGCTCCCTTGGTAAATGATGTACAAGATGACAGTGCAAGGATTGATATGGATGTTGCAGC
TAATGATCATGTGCATGCTCAGGATCAGGAAAGCTCACAGTTGGATGTGGCTACAGCTCT
GTTAAATGAGGTGGAAACAGAGATTGCCGAAGCTGGAGACCATGTTGTACAGGACTGCAC
AAATATGGATATGCAGATCCAAACTGGAGATGACAAACATGTTGGCACTATTGCGGACAC
TGCCACAGATGAGGAGGGCAAGCACATGGGTGAAGATACCATGGGCAGAGATGGTAGTGA
GAAACATGATGGGGCAGTCGGTGTTGATGTGTCTGATGAGAGGGTAGAAATGGGTAGGGG
TGGACTGTCTGGAGATGATAACGAGCAAAAGGAAGTTGCAACAGCTGATGAAGATCGTGT
GGAAGAGGAAGACATGCAGGTGGATGCCGTAAGCATTACTGGAGACATGGTTGAGGAAGG
CAGAATTGCTGTTGAATACATTGCAGGCGAAGCTGTAAATGGCAAGGATGGTATTGATGT
CCCTGAAGAAAAGACTCCTCAGATAGACAAGGCTGGTAATGATATCCCTGAAGAAGAGGG
TCTCCAAATGGGGGGAGCTGGCTTGATTGGCAATAAAAATGGGCCGAAAGAGGCTGTGAT
AGCTGATTACCATGGAGTGGAAGAAAATACCATACTGATGGAGGCAGCTACCACGACTAA
CAATGATGATGATGATGACAACAAAATTGTTGGTGAAGATGTTGCAGAAGCTGTCAATGA
CATAACTGGTGATGGTGTCCCTGAACAAGAGGCTGCACATATGGATGACGATGATGACGA
TGAGCCACCTCCTTTAGTGGCAAAGAAAGGTGGAGGGCGTCGTAAGAGGGGCCGTCCATC
TTCCAAGGTCCAGGCTGTGGTGAAACCATCTGTAAAGGGGAAAGATGAAGAGGAGGTTTG
CTTCATTTGCTTTGATGGTGGTGATCTTGTGATTTGTGATCGTAGGGGCTGCCCTAAAGC
TTACCATCCTTCTTGTGTTAATCGGGATGACGACTTCTTCAAGTCAAAGGGTCGGTGGAA
CTGTGGGTGGCACATTTGTAGCAACTGTCAGAAACCTGCCCGCCATATGTGCTACACCTG
CACCTTTTCATTATGCAAGGCATGCATGAAAGATGCAAAGTTTAGCTGTGTCAGAGAAAA
CAAGGGCTTTTGTGCTACGTGCATGAACACTGTGATGTTGATAGAGAACAGAGAGGAGGC
TGCAGACCCAATGGAGGTGGATTTTGATGACAAAAGCAGCTGGTGGTATTTGTTCAAGGA
CTATTGGTTAAATTTGAAGACAAACTTGTCATTGACAGTTGAGGAAATATCAGCAGCCAA
GTCTCAAAAGAGTGGAGAATTACCTGATACTAATGACGAAATTAATTCAGAGAGTTCATC
AGGGCGTCATCTAGAAAACAATACATCGAAAAAGAGGGGCAGGAACCGATCTAAACAAGC
TGCCATCGAGCAGGGCTCTGAAGGAAAAGAGACCACTGGGAAATCTGCCAAACTAGGTCT
GTCAGGCATTCGTGATGCTCAGACTTCTTCAGGGAAAAAGGTTAGAAAATTATCCAGGCG
TTCTTTGAGCAGCCAGCATTCACCAAAAGATTCTGAAAGTGTTGGGACATCAACATCCTC
AGCTGACGAGGTCAGCTGGGCTTCTAAGGAGCTCATAAACTTTGTAGCTCATGCGAGAAA
TGGTGATAAATCTGTGATCAATCAGTATGACGTCCAACCCCTTTTACTTGACTATATCAA
ACGCAACAATCTGCGCGATCCTCGTCGGAAAAGCCAGATAATTTGTGATTCTTTGCTCCA
AAGTCTCTTCGGGAAAGACCGTGTTGGGCATTTTGAGATGCTTAAGCTTCTTGAATCACA
TTTTCCCACGAGTGAGGTTTCACCAATTGATGCTGATGAAAATCATGGTGGTGTAGTAGA
CCCTGATCCTAGTCAGGATGCTGATGGTAACAGTGAAGCTTCAGTTGTTATGAGTTCAGA
AAAAAGAAGAAAATCACGTAAGTATGACCTGAAACATCAGCCTAATATCGATGACTATGC
GGCAATAGATAACCATAACATTGGCTTGATGTACTTACGTCGCAACCTAATGGAAGAATT
GATTGATGACGTTGACACTTTTGATGAGAAAGTTGTTGGATCGTTTGTGAGAATAAGAAT
TCCTGGTACAGGGCAAAGACAGGACATTTATAGACTTGTACAAATTGTTGGCACTGGAAG
ATCTGCAGAAAAATATAAATCTG