Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043407_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:198975889:198981155:1 gene:Zm00001d043407 gene_biotype:protein_coding transcript_biotype:protein_coding description:SGS domain-containing protein
Sequence

ATGTCGGCGGGTGAGCTGCGGTTGGAGCTGGACGAGCTGCGGCGGCTGGAGAGCCTCGCC
AAGCACCCCCGCGTCCAGATCCTCCTCGCCAACGAAATCCGCAACGTTGAAGCGAAGTTG
GCGAAGGCAACCGAACCATCGCCTGAGCCACTGGCGGCGGCTTCTGCGCCAGCGCCCGCG
CCCGCTGCGCGTCCTGTTTTAAGCTACGTCACTCTTGGGTCGTTCAGCTGGGAGCAGGAC
AACGAGAAGATTAGGATATATGTTTCCCTTGAGGGAGTTGAGCAAGAGAAGGTGGAGACT
ACTTTCAAGCCAACATCAGTGGATATAAAGTTTCATGATGTCAAAGGCAAGAATTACCGG
TGTGCTATACCAAAGCTGAACAAGGAAATTGTTCCTGAGAAATGTAAGGTTGTGGTGAAA
CCAACCAGGGTTGTTGTTACTCTTTTCAAGGGTTCTAAAGGCAACTGGTTAGACTTGCAC
TTCAAGGAAGACAAGTTCAAGCCAAACATGGACAAGGAAAAAGATCCGATGTCAGGAATT
ATGGACTTAATGAAGAACATGTACGAGGAGGGCGACGAGGATATGAAGCGCACAATAGCC
AAAGCTTGGTCTGATGCCAGGTCTGGGAAGACGACTGATTCGATGAGCGGATTACGTTGA

Peptide Sequence

PEP ID

Zm00001d043407_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:198975889:198981155:1 gene:Zm00001d043407 transcript:Zm00001d043407_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:SGS domain-containing protein
Sequence

MSAGELRLELDELRRLESLAKHPRVQILLANEIRNVEAKLAKATEPSPEPLAAASAPAPA
PAARPVLSYVTLGSFSWEQDNEKIRIYVSLEGVEQEKVETTFKPTSVDIKFHDVKGKNYR
CAIPKLNKEIVPEKCKVVVKPTRVVVTLFKGSKGNWLDLHFKEDKFKPNMDKEKDPMSGI
MDLMKNMYEEGDEDMKRTIAKAWSDARSGKTTDSMSGLR

Transcript Sequence

Transcript ID

Zm00001d043407_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:198975889:198981155:1 gene:Zm00001d043407 gene_biotype:protein_coding transcript_biotype:protein_coding description:SGS domain-containing protein
Sequence

AACGAGCCAGCTCGAGCTCGGTCGAGCCGAGGGGTCGATATCCACCCCTAGCTGCCTGGT
GCCCACGATAACCCAGAGACCTCGAGAACGGCTGGAAGAACCGAGAGCGCTCCGGAAATG
TCGGCGGGTGAGCTGCGGTTGGAGCTGGACGAGCTGCGGCGGCTGGAGAGCCTCGCCAAG
CACCCCCGCGTCCAGATCCTCCTCGCCAACGAAATCCGCAACGTTGAAGCGAAGTTGGCG
AAGGCAACCGAACCATCGCCTGAGCCACTGGCGGCGGCTTCTGCGCCAGCGCCCGCGCCC
GCTGCGCGTCCTGTTTTAAGCTACGTCACTCTTGGGTCGTTCAGCTGGGAGCAGGACAAC
GAGAAGATTAGGATATATGTTTCCCTTGAGGGAGTTGAGCAAGAGAAGGTGGAGACTACT
TTCAAGCCAACATCAGTGGATATAAAGTTTCATGATGTCAAAGGCAAGAATTACCGGTGT
GCTATACCAAAGCTGAACAAGGAAATTGTTCCTGAGAAATGTAAGGTTGTGGTGAAACCA
ACCAGGGTTGTTGTTACTCTTTTCAAGGGTTCTAAAGGCAACTGGTTAGACTTGCACTTC
AAGGAAGACAAGTTCAAGCCAAACATGGACAAGGAAAAAGATCCGATGTCAGGAATTATG
GACTTAATGAAGAACATGTACGAGGAGGGCGACGAGGATATGAAGCGCACAATAGCCAAA
GCTTGGTCTGATGCCAGGTCTGGGAAGACGACTGATTCGATGAGCGGATTACGTTGAGCT
GGTATAATCAGTTGATGGGCTTAAGTTTTCTGCGCTAGCCCCTGCAGCCGAAGTGTTTCT
GATGGTTCAAATAGCGTTGCAGTGCCTTGTTGGTGTTAGTCCTTGTTTATCTTACATTTG
TGAGTGAAGTTGGACGTGCCAAACATATTTAAATATATCCTCTTGAACGGGGGAAAGATC
ATATCAAGTCCAAGAGGTTTTGTGCTTTTGTGGAATTACCACGGCGTTTCTGTTTGCTAC
GAAACGATGGTAGTAACAGCTTGAGCCTTGCCAGAAATTTCCTGTTTGTGACGCTGTTTT