Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043376_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:3:198076210:198095500:-1 gene:Zm00001d043376 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long-chain-fatty-acid-CoA ligase-like protein

Sequence

ATGCGGACACAGGCGTGGGGGCGCGGGGCGGTGGCGCGCTTGATGACGCCATTCAATCGC
CGCGCGGCCCACGCCTCTTCTCCCCACCTGCTCCGCGCCTGCTCATCCGCCTCTTATACC
ATCGCTCTCGCTCGCCTCCGACGCCACTTCACCTCTTCTGCTTCCTTCTCCCCAGCATAC
AGTGCCAGACAGGATACCCACACATTCATGGAGGTGGTTCAAGAAGTCCTTAGGCATGGC
TCAGCAGATAGTGTCCGTGCTGTCATAAGAGCTAACAAAAAGAGCTACAGCCTTGTCCAG
CTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATATGACACCAAAT
GGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACAGGATTCCTTCATGGAGCTCGT
GTTGGCATTGTGGCTAAACCCTCTCCTGAATTTGTTGCTGGGGTATTTGGAACCTGGCTT
TCTGGTGGAGTTGCAGTACCCCTTGCCCTTAGCTATCCAGAAGCTGAGCTTCTTCATGTC
ATGAATGACTCAGATATTTCAATGGTTTTAAGCACCAAGGAGCATCACGAAATCATGGAG
AACCTTTCTATCAAGTGTTCTGCTTATTGTTCTATTCTTCCATCTGTCACTAGTATACCT
TCAGAAATCAATCCTCAAGAACCTTCAAGCAATGAGGCGATTTCATCAGTCTCTACTTTA
ATAACTGAGACCAACAGTTCAAAGAAAATCAAAGGCGATGACCCTGCTCTTATCCTTTAC
ACAAGTGGCACAACTGGTAAACCTAAAGGAGTAGTTCACACCCATGAGGGCATTCTTTCT
CAGGTTCAGATTCTATCTGAAGCGTGGGGATATCGAAGTGAAGACCAATTTCTGCACTGT
CTCCCGCTGCACCATGTGCATGGGCTTTTCAATGCTCTATTTGCGCCCCTTTATTCAGGA
TCAGTGGTTGAGTTTATACCAAAATTCAGTGTAAGCGGGATATGGCAGAGATGGCGAGAA
TCATATCCCAACGATGCGAGTAAAAGTACAGAGGCCATTACAGTATTTACTGGAGTTCCA
ACCATGTATACACGTCTGCTGCAAGGGTATGATAGTATGGATCCTGATCAAAAGTCGGCC
TCTTCTTACGCTGCAAAGCATCTGAGGTTAATGATGTGTGGATCATCAGCTCTTCCTTCC
CCACTTATGAAGAGGTGGGAGGAAGTGACAGGCCATCGTCTTTTGGAACGCTATGGTATG
ACTGAGTTTGTCATGGCACTGTCTAATCCATTGCATGGTATCCGAAAAGAAGGTACAGTT
GGTAAACCTCTTCCACGCATTGAGGCCAAGATCATTATGGAGGACGGGGCTGAAACTACA
ACTGGAGTTGGCGAGCTCTGCATTAGAAGTCCATCTCTTTTCAAGGAGTATTGGAAAAGA
CCAGAGGTCACCGCAGAATCTTTCATTGATGGAGGATTCTTCAAGACAGGTGATACAGTA
ACTGTAGATGAGGAAGGATACTTCATAATTTTGGGACGCACAAATGCCGACATTATGAAA
TTTGGCGGTTACAAGCTGTCAGCATTAGAAATTGAGGCAGTACTGTTAGAGCATGATGCT
GTACTGGAATGTGCTGTCCTTGGCTTGCCTGATGAAGCCTATGGGGAGGTTATATGTGCA
ATAATTGTGCCTAAGGAGGATGCAAAGAAAAAGGCTGGACAGGACTCAAAGCCAGCGCTA
ACCTTGGAAGCATTAACAAGTTGGTCGAAAGATAAGCTTGCTCCATACAAGATTCCAACA
AGACTATACTTGTGGGATTCTCTTCCTCGGAATGCCATGGGAAAGGTTAACAAGAAGGAG
CTGAAGAAATTGTTAGGAGCTTAG

Peptide Sequence

PEP ID

Zm00001d043376_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:3:198076210:198095500:-1 gene:Zm00001d043376 transcript:Zm00001d043376_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long-chain-fatty-acid-CoA ligase-like protein

Sequence

MRTQAWGRGAVARLMTPFNRRAAHASSPHLLRACSSASYTIALARLRRHFTSSASFSPAY
SARQDTHTFMEVVQEVLRHGSADSVRAVIRANKKSYSLVQLIAASFDVYNILCSKNMTPN
GMQDSSSKGRNGTGFLHGARVGIVAKPSPEFVAGVFGTWLSGGVAVPLALSYPEAELLHV
MNDSDISMVLSTKEHHEIMENLSIKCSAYCSILPSVTSIPSEINPQEPSSNEAISSVSTL
ITETNSSKKIKGDDPALILYTSGTTGKPKGVVHTHEGILSQVQILSEAWGYRSEDQFLHC
LPLHHVHGLFNALFAPLYSGSVVEFIPKFSVSGIWQRWRESYPNDASKSTEAITVFTGVP
TMYTRLLQGYDSMDPDQKSASSYAAKHLRLMMCGSSALPSPLMKRWEEVTGHRLLERYGM
TEFVMALSNPLHGIRKEGTVGKPLPRIEAKIIMEDGAETTTGVGELCIRSPSLFKEYWKR
PEVTAESFIDGGFFKTGDTVTVDEEGYFIILGRTNADIMKFGGYKLSALEIEAVLLEHDA
VLECAVLGLPDEAYGEVICAIIVPKEDAKKKAGQDSKPALTLEALTSWSKDKLAPYKIPT
RLYLWDSLPRNAMGKVNKKELKKLLGA

Transcript Sequence

Transcript ID

Zm00001d043376_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:198076210:198095500:-1 gene:Zm00001d043376 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long-chain-fatty-acid-CoA ligase-like protein

Sequence

GGCGATGGAAAATTCGCCATTGAAATCCCTGGTGGCAGAGCCCGAGCAGCGACCGCCGAG
GTTGAGACTTGAGAGACCTATGAAACCGCGAGGCGCCGCACACCAACCAACCCCCGGGCT
GCCCGTAAATGCGGACACAGGCGTGGGGGCGCGGGGCGGTGGCGCGCTTGATGACGCCAT
TCAATCGCCGCGCGGCCCACGCCTCTTCTCCCCACCTGCTCCGCGCCTGCTCATCCGCCT
CTTATACCATCGCTCTCGCTCGCCTCCGACGCCACTTCACCTCTTCTGCTTCCTTCTCCC
CAGCATACAGTGCCAGACAGGATACCCACACATTCATGGAGGTGGTTCAAGAAGTCCTTA
GGCATGGCTCAGCAGATAGTGTCCGTGCTGTCATAAGAGCTAACAAAAAGAGCTACAGCC
TTGTCCAGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATATGA
CACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACAGGATTCCTTCATG
GAGCTCGTGTTGGCATTGTGGCTAAACCCTCTCCTGAATTTGTTGCTGGGGTATTTGGAA
CCTGGCTTTCTGGTGGAGTTGCAGTACCCCTTGCCCTTAGCTATCCAGAAGCTGAGCTTC
TTCATGTCATGAATGACTCAGATATTTCAATGGTTTTAAGCACCAAGGAGCATCACGAAA
TCATGGAGAACCTTTCTATCAAGTGTTCTGCTTATTGTTCTATTCTTCCATCTGTCACTA
GTATACCTTCAGAAATCAATCCTCAAGAACCTTCAAGCAATGAGGCGATTTCATCAGTCT
CTACTTTAATAACTGAGACCAACAGTTCAAAGAAAATCAAAGGCGATGACCCTGCTCTTA
TCCTTTACACAAGTGGCACAACTGGTAAACCTAAAGGAGTAGTTCACACCCATGAGGGCA
TTCTTTCTCAGGTTCAGATTCTATCTGAAGCGTGGGGATATCGAAGTGAAGACCAATTTC
TGCACTGTCTCCCGCTGCACCATGTGCATGGGCTTTTCAATGCTCTATTTGCGCCCCTTT
ATTCAGGATCAGTGGTTGAGTTTATACCAAAATTCAGTGTAAGCGGGATATGGCAGAGAT
GGCGAGAATCATATCCCAACGATGCGAGTAAAAGTACAGAGGCCATTACAGTATTTACTG
GAGTTCCAACCATGTATACACGTCTGCTGCAAGGGTATGATAGTATGGATCCTGATCAAA
AGTCGGCCTCTTCTTACGCTGCAAAGCATCTGAGGTTAATGATGTGTGGATCATCAGCTC
TTCCTTCCCCACTTATGAAGAGGTGGGAGGAAGTGACAGGCCATCGTCTTTTGGAACGCT
ATGGTATGACTGAGTTTGTCATGGCACTGTCTAATCCATTGCATGGTATCCGAAAAGAAG
GTACAGTTGGTAAACCTCTTCCACGCATTGAGGCCAAGATCATTATGGAGGACGGGGCTG
AAACTACAACTGGAGTTGGCGAGCTCTGCATTAGAAGTCCATCTCTTTTCAAGGAGTATT
GGAAAAGACCAGAGGTCACCGCAGAATCTTTCATTGATGGAGGATTCTTCAAGACAGGTG
ATACAGTAACTGTAGATGAGGAAGGATACTTCATAATTTTGGGACGCACAAATGCCGACA
TTATGAAATTTGGCGGTTACAAGCTGTCAGCATTAGAAATTGAGGCAGTACTGTTAGAGC
ATGATGCTGTACTGGAATGTGCTGTCCTTGGCTTGCCTGATGAAGCCTATGGGGAGGTTA
TATGTGCAATAATTGTGCCTAAGGAGGATGCAAAGAAAAAGGCTGGACAGGACTCAAAGC
CAGCGCTAACCTTGGAAGCATTAACAAGTTGGTCGAAAGATAAGCTTGCTCCATACAAGA
TTCCAACAAGACTATACTTGTGGGATTCTCTTCCTCGGAATGCCATGGGAAAGGTTAACA
AGAAGGAGCTGAAGAAATTGTTAGGAGCTTAGCCATGTGTATAGATGTATTTATCTCTTC
ATTTCCTTCTTAAAGTTTAGCAAGTCGGGCTCATTATATTGATTAGCGAATAAGTGCTTT
CGTTACCATGGACCAATAATCTTCGAAACGGCCTGAGTTAGACTGCACACACATTTATTT
ATCAGAAAAGTTTCTAGT