Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d043358_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:3:197613061:197615823:-1 gene:Zm00001d043358 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF155 family protein
Sequence

ATGGGGCGGCTTCGCGCGTGCTGCCGTCTCCACCGCTTCCTCGCGCCGCCGCCGGCACAA
GTGCCATCACCGGGACAATCTCTGGCCCGCGGGTCCAACACCGCTACCGCTCACGTAGCG
CCTTTCTCGAGGCTTCTCTCGTCGGCCGCGGCCGTTGCGCCCCACGACACACGCGACTCG
GGCCTCGGCGGTTCGGCGTACTGGGCCTGGATTCGCGCGGCGACCGAGTCGGCCCCGGCT
CCTTCGCCGCCCCAGGAGGAGGAGGACGAGGGCCCAGCACGCTACATCCCCGTCAAAGCC
TACTTCCTCTCCACCAGCATTGATCTGAAGAGCATGCAAGCGGAGCACGGGAATGATATT
GTACCTCCGTCGACCCGTTTGCTTAACTACATTGCGCTTCGGTACTCCGAGTTCCCACCT
GAGATTATGTATGGTTCTGCTGTGCTTTTCAACATTGCTGATCATGAAGCCGAGTACTAT
CTTGATATAATTAGGAAGCATGCTTCAGGATGGCTTCCAGAGATGAGAAAAGATGATTAT
GCAGTGGTTGAGAAACCATCCTTGACAACATGGATGAAAGGAGGACTTGATTATATAGTT
CTTAAAAGTTTAGATACAGACGGGATTCGCATAATTTCAAGCGTTCTTGGTCAAAGTATC
GCCCTTGATCACTATATTCGGCAGGTCGATGATATGGTTGAGGAATTCACTGAAATTAAT
CGTGTCATGGAGAAAACCGGTAACTTTACCATGCAAAGAAAAAAACTCTTTCAACTTGTG
GGTAAGGCCAATTCTAATCTTGCGGATGTTATCATCAGACTTGGTCTTTTTGACAGGTCA
GAAATTGCTTGGAAAAATGCAAATTATGCACAAATTCTAGAATATCTTCGGGAGGAATAT
GAACTGAATCAGCGTTTTGGAAGCCTTGACTTCAAACTGAAATTTGTGGAGCATAACATT
CACTTTCTTCAAGAGGTCCTCCAAAACAGACGGTCTGATCTGCTGGAATGGGGTGTCATA
ATACTGCTGATTATTGAGATTGCTATCTCATTATATGAAATTGCCAAGGACTCCATGATC
GATTGA

Peptide Sequence

PEP ID

Zm00001d043358_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:3:197613061:197615823:-1 gene:Zm00001d043358 transcript:Zm00001d043358_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF155 family protein
Sequence

MGRLRACCRLHRFLAPPPAQVPSPGQSLARGSNTATAHVAPFSRLLSSAAAVAPHDTRDS
GLGGSAYWAWIRAATESAPAPSPPQEEEDEGPARYIPVKAYFLSTSIDLKSMQAEHGNDI
VPPSTRLLNYIALRYSEFPPEIMYGSAVLFNIADHEAEYYLDIIRKHASGWLPEMRKDDY
AVVEKPSLTTWMKGGLDYIVLKSLDTDGIRIISSVLGQSIALDHYIRQVDDMVEEFTEIN
RVMEKTGNFTMQRKKLFQLVGKANSNLADVIIRLGLFDRSEIAWKNANYAQILEYLREEY
ELNQRFGSLDFKLKFVEHNIHFLQEVLQNRRSDLLEWGVIILLIIEIAISLYEIAKDSMI
D

Transcript Sequence

Transcript ID

Zm00001d043358_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:197613061:197615823:-1 gene:Zm00001d043358 gene_biotype:protein_coding transcript_biotype:protein_coding description:DUF155 family protein
Sequence

GCAACTCGCCAGCCTGATGGGGCGGCTTCGCGCGTGCTGCCGTCTCCACCGCTTCCTCGC
GCCGCCGCCGGCACAAGTGCCATCACCGGGACAATCTCTGGCCCGCGGGTCCAACACCGC
TACCGCTCACGTAGCGCCTTTCTCGAGGCTTCTCTCGTCGGCCGCGGCCGTTGCGCCCCA
CGACACACGCGACTCGGGCCTCGGCGGTTCGGCGTACTGGGCCTGGATTCGCGCGGCGAC
CGAGTCGGCCCCGGCTCCTTCGCCGCCCCAGGAGGAGGAGGACGAGGGCCCAGCACGCTA
CATCCCCGTCAAAGCCTACTTCCTCTCCACCAGCATTGATCTGAAGAGCATGCAAGCGGA
GCACGGGAATGATATTGTACCTCCGTCGACCCGTTTGCTTAACTACATTGCGCTTCGGTA
CTCCGAGTTCCCACCTGAGATTATGTATGGTTCTGCTGTGCTTTTCAACATTGCTGATCA
TGAAGCCGAGTACTATCTTGATATAATTAGGAAGCATGCTTCAGGATGGCTTCCAGAGAT
GAGAAAAGATGATTATGCAGTGGTTGAGAAACCATCCTTGACAACATGGATGAAAGGAGG
ACTTGATTATATAGTTCTTAAAAGTTTAGATACAGACGGGATTCGCATAATTTCAAGCGT
TCTTGGTCAAAGTATCGCCCTTGATCACTATATTCGGCAGGTCGATGATATGGTTGAGGA
ATTCACTGAAATTAATCGTGTCATGGAGAAAACCGGTAACTTTACCATGCAAAGAAAAAA
ACTCTTTCAACTTGTGGGTAAGGCCAATTCTAATCTTGCGGATGTTATCATCAGACTTGG
TCTTTTTGACAGGTCAGAAATTGCTTGGAAAAATGCAAATTATGCACAAATTCTAGAATA
TCTTCGGGAGGAATATGAACTGAATCAGCGTTTTGGAAGCCTTGACTTCAAACTGAAATT
TGTGGAGCATAACATTCACTTTCTTCAAGAGGTCCTCCAAAACAGACGGTCTGATCTGCT
GGAATGGGGTGTCATAATACTGCTGATTATTGAGATTGCTATCTCATTATATGAAATTGC
CAAGGACTCCATGATCGATTGAGAGCTCTGAACAACACCTCTATTCATCCTCGATCATCC
CATTATGCTAACTCCAGATCCACTGTTTTAACAAAAAAAGGAAAAGAATGACCCCAGCTT
CCATATTTTCTGACTATCCATCTCCACCCTTTGGATTTCTAACCTTAGATGAAAGGAAGT
TGGGAATGGCGTTCTGGCTTGAGTTTATTTACATCCTTTAATTCTACAACTCCAAACGAA
AAGAAGTTTGGCCAATTTTC